Guide to the Human Genome
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Name: RALYL Sequence: fasta or formatted (304aa) NCBI GI: 154240692
Description:

RALY RNA binding protein-like isoform 1

Referenced in:

hnRNP

Other entries for this name:
alt prot [291aa] RALY RNA binding protein-like isoform 2
alt prot [291aa] RALY RNA binding protein-like isoform 2
alt prot [291aa] RALY RNA binding protein-like isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         20           2
 C cysteine            0.7          2           1
 D aspartate           5.6         17           2
 E glutamate           8.9         27           2
 F phenylalanine       3.3         10           1
 G glycine             8.6         26           2
 H histidine           1.6          5           1
 I isoleucine          5.9         18           1
 K lysine              9.5         29           2
 L leucine             6.6         20           2
 M methionine          2.0          6           1
 N asparagine          3.3         10           1
 P proline             5.6         17           4
 Q glutamine           3.9         12           2
 R arginine            6.6         20           3
 S serine              6.9         21           1
 T threonine           4.9         15           3
 V valine              5.9         18           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RALY RNA binding protein-like isoform 1 
RALYL                 0.957   RALY RNA binding protein-like isoform 2 
RALYL                 0.957   RALY RNA binding protein-like isoform 2 
RALYL                 0.957   RALY RNA binding protein-like isoform 2 
RALY                  0.443   RNA binding protein (autoantigenic, hnRNP-associated ...
HNRNPC                0.423   heterogeneous nuclear ribonucleoprotein C isoform a...
HNRNPC                0.423   heterogeneous nuclear ribonucleoprotein C isoform a...
HNRNPC                0.418   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPC                0.418   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPCL1              0.378   heterogeneous nuclear ribonucleoprotein C-like 1 [Ho...
RALY                  0.376   RNA binding protein (autoantigenic, hnRNP-associated...
LOC440563             0.371   heterogeneous nuclear ribonucleoprotein C-like [Hom...
LOC649330             0.364   PREDICTED: heterogeneous nuclear ribonucleoprotein ...
LOC652665             0.364   PREDICTED: similar to heterogeneous nuclear ribonuc...
LOC649330             0.364   heterogeneous nuclear ribonucleoprotein C-like [Hom...
RBM14                 0.069   RNA binding motif protein 14 
HNRNPR                0.046   heterogeneous nuclear ribonucleoprotein R isoform 3...
HNRNPR                0.046   heterogeneous nuclear ribonucleoprotein R isoform 1...
HNRNPR                0.046   heterogeneous nuclear ribonucleoprotein R isoform 4...
HNRNPR                0.046   heterogeneous nuclear ribonucleoprotein R isoform 2 [...
PUF60                 0.038   poly-U binding splicing factor 60KDa isoform c [Hom...
PUF60                 0.038   poly-U binding splicing factor 60KDa isoform b [Homo...
PUF60                 0.038   poly-U binding splicing factor 60KDa isoform a [Homo...
RBMXL1                0.034   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.034   RNA binding motif protein, X-linked-like 1 
RBMX                  0.034   RNA binding motif protein, X-linked 
LOC100288788          0.034   PREDICTED: similar to RNA binding motif protein, X-...
LOC100288788          0.034   PREDICTED: hypothetical protein XP_002343863 
SFRS6                 0.034   arginine/serine-rich splicing factor 6 
TIA1                  0.033   TIA1 protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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