Guide to the Human Genome
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Name: INPP5D Sequence: fasta or formatted (1188aa) NCBI GI: 40254823
Description:

SH2 containing inositol phosphatase isoform b

Referenced in:

Inositol Pathways
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1189aa] SH2 containing inositol phosphatase isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         46           2
 C cysteine            1.3         16           1
 D aspartate           4.4         52           2
 E glutamate           8.0         95           4
 F phenylalanine       3.7         44           2
 G glycine             6.0         71           2
 H histidine           2.7         32           2
 I isoleucine          4.7         56           2
 K lysine              7.8         93           2
 L leucine             9.7        115           2
 M methionine          1.6         19           1
 N asparagine          3.0         36           1
 P proline             9.3        110           3
 Q glutamine           5.1         60           3
 R arginine            4.5         54           2
 S serine              9.3        111           3
 T threonine           6.8         81           2
 V valine              4.6         55           2
 W tryptophan          0.9         11           1
 Y tyrosine            2.6         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH2 containing inositol phosphatase isoform b 
INPP5D                0.998   SH2 containing inositol phosphatase isoform a 
INPPL1                0.337   inositol polyphosphate phosphatase-like 1 
SYNJ1                 0.063   synaptojanin 1 isoform a 
SYNJ1                 0.063   synaptojanin 1 isoform b 
SYNJ1                 0.062   synaptojanin 1 isoform d 
SYNJ1                 0.061   synaptojanin 1 isoform c 
OCRL                  0.057   phosphatidylinositol polyphosphate 5-phosphatase iso...
OCRL                  0.057   phosphatidylinositol polyphosphate 5-phosphatase iso...
SYNJ2                 0.054   synaptojanin 2 
INPP5B                0.053   inositol polyphosphate-5-phosphatase, 75kDa precurs...
INPP5E                0.047   inositol polyphosphate-5-phosphatase E 
INPP5J                0.040   phosphatidylinositol (4,5) bisphosphate 5-phosphatas...
INPP5K                0.036   inositol polyphosphate-5-phosphatase K isoform 1 [Ho...
INPP5K                0.029   inositol polyphosphate-5-phosphatase K isoform 2 [H...
INPP5K                0.029   inositol polyphosphate-5-phosphatase K isoform 2 [Ho...
SH2D1A                0.028   SH2 domain protein 1A isoform 2 
SH2D1A                0.028   SH2 domain protein 1A isoform 1 
SH2D1B                0.025   SH2 domain containing 1B 
NACA                  0.022   nascent polypeptide-associated complex alpha subuni...
PRG4                  0.018   proteoglycan 4 isoform D 
PRG4                  0.018   proteoglycan 4 isoform C 
PRG4                  0.018   proteoglycan 4 isoform B 
PRG4                  0.018   proteoglycan 4 isoform A 
PRB1                  0.016   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB3                  0.016   proline-rich protein BstNI subfamily 3 precursor [H...
ABL1                  0.015   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.015   c-abl oncogene 1, receptor tyrosine kinase isoform b...
ABL2                  0.015   arg tyrosine kinase isoform c 
ABL2                  0.015   arg tyrosine kinase isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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