Guide to the Human Genome
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Name: INPP5J Sequence: fasta or formatted (638aa) NCBI GI: 50726960
Description:

phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         42           2
 C cysteine            0.6          4           1
 D aspartate           6.1         39           2
 E glutamate           4.4         28           2
 F phenylalanine       4.7         30           1
 G glycine             9.9         63           4
 H histidine           3.0         19           1
 I isoleucine          2.5         16           1
 K lysine              4.4         28           2
 L leucine            10.0         64           3
 M methionine          2.0         13           1
 N asparagine          2.7         17           1
 P proline             7.5         48           2
 Q glutamine           4.2         27           2
 R arginine            6.9         44           2
 S serine             10.5         67           3
 T threonine           4.1         26           1
 V valine              5.5         35           2
 W tryptophan          2.2         14           1
 Y tyrosine            2.2         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol (4,5) bisphosphate 5-phosphatas... 
INPP5K                0.281   inositol polyphosphate-5-phosphatase K isoform 1 [Ho...
INPP5K                0.242   inositol polyphosphate-5-phosphatase K isoform 2 [H...
INPP5K                0.242   inositol polyphosphate-5-phosphatase K isoform 2 [Ho...
INPP5B                0.125   inositol polyphosphate-5-phosphatase, 75kDa precurs...
SYNJ2                 0.120   synaptojanin 2 
OCRL                  0.116   phosphatidylinositol polyphosphate 5-phosphatase iso...
OCRL                  0.116   phosphatidylinositol polyphosphate 5-phosphatase iso...
SYNJ1                 0.106   synaptojanin 1 isoform a 
SYNJ1                 0.106   synaptojanin 1 isoform b 
SYNJ1                 0.105   synaptojanin 1 isoform d 
SYNJ1                 0.104   synaptojanin 1 isoform c 
INPP5D                0.074   SH2 containing inositol phosphatase isoform b 
INPP5D                0.074   SH2 containing inositol phosphatase isoform a 
INPPL1                0.065   inositol polyphosphate phosphatase-like 1 
INPP5E                0.063   inositol polyphosphate-5-phosphatase E 
LOC100291868          0.018   PREDICTED: hypothetical protein XP_002345322 
LOC100290196          0.018   PREDICTED: hypothetical protein XP_002347647 
LOC100289429          0.018   PREDICTED: hypothetical protein XP_002342197 
TNRC18                0.016   trinucleotide repeat containing 18 
SRRM2                 0.015   splicing coactivator subunit SRm300 
COL3A1                0.015   collagen type III alpha 1 preproprotein 
TAX1BP1               0.015   Tax1 (human T-cell leukemia virus type I) binding p...
TAX1BP1               0.015   Tax1 (human T-cell leukemia virus type I) binding pr...
ZNF828                0.015   zinc finger protein 828 
SCAF1                 0.014   SR-related CTD-associated factor 1 
PSRC1                 0.014   proline/serine-rich coiled-coil 1 isoform c 
MAP7D1                0.014   MAP7 domain containing 1 
CALCOCO1              0.013   coiled-coil transcriptional coactivator isoform 1 [H...
SRRM1                 0.013   serine/arginine repetitive matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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