Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FBLN2 Sequence: fasta or formatted (1184aa) NCBI GI: 51873055
Description:

fibulin 2 isoform b precursor

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [1231aa] fibulin 2 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5        113           4
 C cysteine            8.5        101           2
 D aspartate           4.6         55           2
 E glutamate           8.6        102           9
 F phenylalanine       2.5         30           2
 G glycine             9.5        113           3
 H histidine           2.8         33           1
 I isoleucine          3.0         35           2
 K lysine              2.1         25           1
 L leucine             7.1         84           3
 M methionine          1.0         12           1
 N asparagine          3.4         40           1
 P proline             7.9         94           2
 Q glutamine           5.0         59           2
 R arginine            4.7         56           2
 S serine              5.7         67           2
 T threonine           5.3         63           2
 V valine              5.3         63           3
 W tryptophan          0.6          7           1
 Y tyrosine            2.7         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibulin 2 isoform b precursor 
FBLN2                 0.991   fibulin 2 isoform a precursor 
FBLN1                 0.246   fibulin 1 isoform C precursor 
FBLN1                 0.204   fibulin 1 isoform D 
FBLN1                 0.202   fibulin 1 isoform B precursor 
FBLN1                 0.202   fibulin 1 isoform A precursor 
EFEMP2                0.109   EGF-containing fibulin-like extracellular matrix pr...
FBN1                  0.106   fibrillin 1 precursor 
HMCN1                 0.101   hemicentin 1 
FBN2                  0.096   fibrillin 2 precursor 
FBN3                  0.096   fibrillin 3 precursor 
LTBP4                 0.095   latent transforming growth factor beta binding prot...
LTBP4                 0.095   latent transforming growth factor beta binding prot...
LTBP4                 0.095   latent transforming growth factor beta binding prot...
FBLN5                 0.094   fibulin 5 precursor 
LTBP2                 0.093   latent transforming growth factor beta binding protei...
LTBP1                 0.089   latent transforming growth factor beta binding prote...
LTBP1                 0.089   latent transforming growth factor beta binding prote...
EFEMP1                0.087   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.087   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.087   EGF-containing fibulin-like extracellular matrix prot...
MATN2                 0.077   matrilin 2 isoform b precursor 
MATN2                 0.077   matrilin 2 isoform a precursor 
LTBP3                 0.073   latent transforming growth factor beta binding prot...
LTBP3                 0.073   latent transforming growth factor beta binding prote...
HMCN2                 0.070   PREDICTED: hemicentin 2 
HMCN2                 0.070   PREDICTED: hemicentin 2 
HMCN2                 0.070   PREDICTED: hemicentin 2 
SCUBE1                0.070   signal peptide, CUB domain, EGF-like 1 
MEGF6                 0.066   EGF-like-domain, multiple 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press