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Search of human proteins with 40018644
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo
sapiens]
(477 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens] 981 0.0
gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens] 942 0.0
gi|8922313 G patch domain containing 2 [Homo sapiens] 229 4e-60
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 39 0.014
gi|151301228 formin binding protein 3 [Homo sapiens] 37 0.039
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 36 0.088
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.15
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.15
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 35 0.20
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.20
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.20
gi|223555989 hypothetical protein LOC51101 [Homo sapiens] 34 0.26
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 34 0.26
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.26
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 33 0.44
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 33 0.74
gi|26051223 sperm-associated cation channel 2 isoform 2 [Homo sa... 33 0.74
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 32 0.97
gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens] 32 0.97
gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens] 32 0.97
gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens] 32 1.3
gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens] 32 1.3
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 32 1.3
gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap... 32 1.3
gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo s... 32 1.7
gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo sap... 32 1.7
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 31 2.2
gi|16876443 sperm-associated cation channel 2 isoform 1 [Homo sa... 31 2.2
gi|33188445 microfilament and actin filament cross-linker protei... 31 2.8
gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens] 31 2.8
>gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens]
Length = 477
Score = 981 bits (2537), Expect = 0.0
Identities = 477/477 (100%), Positives = 477/477 (100%)
Query: 1 MDELVHDLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCC 60
MDELVHDLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCC
Sbjct: 1 MDELVHDLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCC 60
Query: 61 YSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTEN 120
YSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTEN
Sbjct: 61 YSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTEN 120
Query: 121 APCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSS 180
APCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSS
Sbjct: 121 APCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSS 180
Query: 181 GHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVCSSSDTGLFTNDEG 240
GHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVCSSSDTGLFTNDEG
Sbjct: 181 GHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVCSSSDTGLFTNDEG 240
Query: 241 RQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDKFSDSTFLLPSRPAQ 300
RQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDKFSDSTFLLPSRPAQ
Sbjct: 241 RQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDKFSDSTFLLPSRPAQ 300
Query: 301 RGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLGTERISHIISDPRQKDFWLPSAGKR 360
RGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLGTERISHIISDPRQKDFWLPSAGKR
Sbjct: 301 RGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLGTERISHIISDPRQKDFWLPSAGKR 360
Query: 361 ERNQFNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGPPCSRDIKRKRKPVATASLS 420
ERNQFNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGPPCSRDIKRKRKPVATASLS
Sbjct: 361 ERNQFNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGPPCSRDIKRKRKPVATASLS 420
Query: 421 SPSAVHMDAVEPTTPASQAPKSPSSEWLVRTSAAEKATDATTATFFKMPQEKSPGYS 477
SPSAVHMDAVEPTTPASQAPKSPSSEWLVRTSAAEKATDATTATFFKMPQEKSPGYS
Sbjct: 421 SPSAVHMDAVEPTTPASQAPKSPSSEWLVRTSAAEKATDATTATFFKMPQEKSPGYS 477
>gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens]
Length = 482
Score = 942 bits (2436), Expect = 0.0
Identities = 468/485 (96%), Positives = 468/485 (96%), Gaps = 11/485 (2%)
Query: 1 MDELVHDLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCC 60
MDELVHDLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCC
Sbjct: 1 MDELVHDLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCC 60
Query: 61 YSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTEN 120
YSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTEN
Sbjct: 61 YSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTEN 120
Query: 121 APCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSS 180
APCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSS
Sbjct: 121 APCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSS 180
Query: 181 GHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVCSSSDTGLFTNDEG 240
GHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVCSSSDTGLFTNDEG
Sbjct: 181 GHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVCSSSDTGLFTNDEG 240
Query: 241 RQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDKFSDSTFLLPSRPAQ 300
RQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDKFSDSTFLLPSRPAQ
Sbjct: 241 RQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDKFSDSTFLLPSRPAQ 300
Query: 301 RGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLGTERISHIISDPRQK--------DF 352
RGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLGTERISHIISDPRQK DF
Sbjct: 301 RGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLGTERISHIISDPRQKEKNKALASDF 360
Query: 353 WLPSAGKRERNQFNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGPPCSRDIKRKRK 412
SA E FNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGPPCSRDIKRKRK
Sbjct: 361 PHISACAHE---FNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGPPCSRDIKRKRK 417
Query: 413 PVATASLSSPSAVHMDAVEPTTPASQAPKSPSSEWLVRTSAAEKATDATTATFFKMPQEK 472
PVATASLSSPSAVHMDAVEPTTPASQAPKSPSSEWLVRTSAAEKATDATTATFFKMPQEK
Sbjct: 418 PVATASLSSPSAVHMDAVEPTTPASQAPKSPSSEWLVRTSAAEKATDATTATFFKMPQEK 477
Query: 473 SPGYS 477
SPGYS
Sbjct: 478 SPGYS 482
>gi|8922313 G patch domain containing 2 [Homo sapiens]
Length = 528
Score = 229 bits (584), Expect = 4e-60
Identities = 163/436 (37%), Positives = 232/436 (53%), Gaps = 39/436 (8%)
Query: 1 MDELVHDLASALEQTSEQNKLG--ELWEEMALSPRQQRRQLRKRRGRKRRS-DFTHLAEH 57
M+ELVHDL SALE++SEQ + G E + +RQ RKRRGRKRRS + H E
Sbjct: 25 MEELVHDLVSALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWET 84
Query: 58 TCCYSEASESSLDEATKDCREVAPVT--NFSDSDDTM-VAKRHPA--LNAIVKSKQHSWH 112
C SE S+SSL+E +KD RE + SDSDD M VAKR P+ LN V+ K+ WH
Sbjct: 85 GHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWH 144
Query: 113 ESDSFTENAPCRPLRRRRKVKRVTSEVAASLQQKLKVS---------DWSYERGCRFKS- 162
ESD +N R LRRRRKVKR+ ++ + K ++ D +R +++
Sbjct: 145 ESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEF 204
Query: 163 ----AKKQRLSRWKENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENM 218
KK++L ++ G L N+T K++MECE EQK SDE M
Sbjct: 205 TKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQT------NKDKMECE--EQKV-SDELM 255
Query: 219 SECETSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVE 278
SE ++SS+ SS+D GLFTNDEGRQGDDEQSDWFYE E + ++P W + +E++
Sbjct: 256 SESDSSSL-SSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITGVVPWWEKEDPTELD 314
Query: 279 R--MDSGLDKFSDSTFLLPSRPAQRGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLG 336
+ D + +F L S P++RG+ RL+RL G +++ ++K +G
Sbjct: 315 KNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSGGTPTSMVPIPGPVG 374
Query: 337 TERISHIISDPRQKDFWLPSAGKRERNQFNPLSPLYSLDVLADASHRRCSPAHCSARQAN 396
+R+ H D D W + E +Q L D A+ H++ ++RQ +
Sbjct: 375 NKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLR-----DNRAERGHKKNCSVRTASRQTS 429
Query: 397 VHWGPPCSRDIKRKRK 412
+H G C+ DIKR+RK
Sbjct: 430 MHLGSLCTGDIKRRRK 445
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 38.5 bits (88), Expect = 0.014
Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 25/253 (9%)
Query: 22 GELWEEMALSPRQQ---RRQLRKRRGRKRRSDFTH--LAEHTCCYSEASESSLDEATKDC 76
GE + +A+ P QQ + ++ R+ KR+ + H + E + D+A ++
Sbjct: 77 GEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKWKHARVKEREHERRKRHREEQDKARREW 136
Query: 77 -----REVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTENAPCRPLRR--R 129
RE+A + + D +R ++ +Q E A R R R
Sbjct: 137 ERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKEREAR 196
Query: 130 RKVKRVTSEVAASLQQKLKVSDWS----------YERGCRFKSAKKQRLSRWK--ENTPW 177
R+V + K+K S WS +E G K K++++ +
Sbjct: 197 REVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 256
Query: 178 TSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS-DENMSECETSSVCSSSDTGLFT 236
S SAE+ + S +G +E E E +E+++GS E E E +TG +
Sbjct: 257 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 316
Query: 237 NDEGRQGDDEQSD 249
+ Q +E S+
Sbjct: 317 EEASEQSAEEVSE 329
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 37.0 bits (84), Expect = 0.039
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 10 SALEQTSEQNKLGELWEEM----ALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCCYSEAS 65
S L+Q + +L +WE++ P + L R R + DF H+ EH C + +
Sbjct: 725 SMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFK-DFMHVLEHECQHHHSK 783
Query: 66 ESSLDEATKD---CREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESD-SFTENA 121
+ +K R + + SD DD+ K+ + S+ S ES+ S+ ++
Sbjct: 784 NKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSK 843
Query: 122 PCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERG-------CRFKSAKKQRLSRWKEN 174
+ ++R+ K + E A ++ K D E+ + KS KK+ K++
Sbjct: 844 KHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKK---TGKDS 900
Query: 175 TPWTSSGHGLCE 186
W +SG L E
Sbjct: 901 GNWDTSGSELSE 912
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 35.8 bits (81), Expect = 0.088
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 6/120 (5%)
Query: 173 ENTPWTSSGHGLCES-AEN-RTFLSKTGRKERMECET---DEQKQGSDENMSECETSSVC 227
E PW CES AEN + L E E ET + + EN++E E +
Sbjct: 796 EGKPWEEKEAENCESRAENFQELLRSMWADEEEEAETLLKSKDHEEDQENVNEAEMEEIY 855
Query: 228 SSSDTGL-FTNDEGRQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDK 286
+ T +E G E +DW G V G + + + D E+E ++ G D+
Sbjct: 856 EFAATQRKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQWDKVEEMEPLEPGRDE 915
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 35.0 bits (79), Expect = 0.15
Identities = 56/265 (21%), Positives = 98/265 (36%), Gaps = 37/265 (13%)
Query: 22 GELWEEMALSPRQQ---------RRQLRKRRGRKRRSDFTHLAEHTCCYSEASE------ 66
GE + +A+ P QQ R+ +++ R+ RS +H + E
Sbjct: 43 GEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKRRHRSHSAEGGKHARVKEKEREHERRKR 102
Query: 67 --SSLDEATKDC-----REVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTE 119
D+A ++ RE+A + + D +R ++ +Q E
Sbjct: 103 HREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERER 162
Query: 120 NAPCRPLRR--RRKVKRVTSEVAASLQQKLKVSDWS----------YERGCRFKSAKKQR 167
A R R RR+V + K+K S WS +E G K K+++
Sbjct: 163 RAEERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEK 222
Query: 168 LSRWK--ENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS-DENMSECETS 224
+ + S SAE+ + S +G +E E E +E+++GS E E E
Sbjct: 223 MEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 282
Query: 225 SVCSSSDTGLFTNDEGRQGDDEQSD 249
+TG + + Q +E S+
Sbjct: 283 EEEEEEETGSNSEEASEQSAEEVSE 307
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 35.0 bits (79), Expect = 0.15
Identities = 56/265 (21%), Positives = 98/265 (36%), Gaps = 37/265 (13%)
Query: 22 GELWEEMALSPRQQ---------RRQLRKRRGRKRRSDFTHLAEHTCCYSEASE------ 66
GE + +A+ P QQ R+ +++ R+ RS +H + E
Sbjct: 77 GEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKRRHRSHSAEGGKHARVKEKEREHERRKR 136
Query: 67 --SSLDEATKDC-----REVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTE 119
D+A ++ RE+A + + D +R ++ +Q E
Sbjct: 137 HREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERER 196
Query: 120 NAPCRPLRR--RRKVKRVTSEVAASLQQKLKVSDWS----------YERGCRFKSAKKQR 167
A R R RR+V + K+K S WS +E G K K+++
Sbjct: 197 RAEERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEK 256
Query: 168 LSRWK--ENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS-DENMSECETS 224
+ + S SAE+ + S +G +E E E +E+++GS E E E
Sbjct: 257 MEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 316
Query: 225 SVCSSSDTGLFTNDEGRQGDDEQSD 249
+TG + + Q +E S+
Sbjct: 317 EEEEEEETGSNSEEASEQSAEEVSE 341
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 34.7 bits (78), Expect = 0.20
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 155 ERGCRFKSAKKQRLSRWKENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS 214
+R + K ++ ++ ++ ++ +G+ ++A+++ K +E E E DE+++
Sbjct: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSK---KKKEEEENEEDEEDEEEEKD 338
Query: 215 DENMSECETSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVP 258
+E+ E + DE GDDEQS W C P
Sbjct: 339 EEDEDEEDDE-------------DEEEDGDDEQSHWQLFLACCP 369
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 34.7 bits (78), Expect = 0.20
Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 30/256 (11%)
Query: 22 GELWEEMALSPRQQRRQLRKRRGRK--RRSDFTHLA------EHTCCYSEASESSLDEAT 73
GE + +A+ P QQ + K RK +R + H EH E D+A
Sbjct: 77 GEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKKHARVKEKEREHERRKRHREEQ--DKAR 134
Query: 74 KDC-----REVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTENAPCRPLRR 128
++ RE+A + + D +R ++ +Q E A R R
Sbjct: 135 REWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKER 194
Query: 129 --RRKVKRVTSEVAASLQQKLKVSDWS----------YERGCRFKSAKKQRLSRWK--EN 174
RR+V + K+K S WS +E G K K++++ +
Sbjct: 195 EARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSD 254
Query: 175 TPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS-DENMSECETSSVCSSSDTG 233
S SAE+ + S +G +E E E +E+++GS E E E +TG
Sbjct: 255 LQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETG 314
Query: 234 LFTNDEGRQGDDEQSD 249
+ + Q +E S+
Sbjct: 315 SNSEEASEQSAEEVSE 330
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 34.7 bits (78), Expect = 0.20
Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 30/256 (11%)
Query: 22 GELWEEMALSPRQQRRQLRKRRGRK--RRSDFTHLA------EHTCCYSEASESSLDEAT 73
GE + +A+ P QQ + K RK +R + H EH E D+A
Sbjct: 43 GEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKKHARVKEKEREHERRKRHREEQ--DKAR 100
Query: 74 KDC-----REVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTENAPCRPLRR 128
++ RE+A + + D +R ++ +Q E A R R
Sbjct: 101 REWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKER 160
Query: 129 --RRKVKRVTSEVAASLQQKLKVSDWS----------YERGCRFKSAKKQRLSRWK--EN 174
RR+V + K+K S WS +E G K K++++ +
Sbjct: 161 EARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSD 220
Query: 175 TPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS-DENMSECETSSVCSSSDTG 233
S SAE+ + S +G +E E E +E+++GS E E E +TG
Sbjct: 221 LQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETG 280
Query: 234 LFTNDEGRQGDDEQSD 249
+ + Q +E S+
Sbjct: 281 SNSEEASEQSAEEVSE 296
>gi|223555989 hypothetical protein LOC51101 [Homo sapiens]
Length = 325
Score = 34.3 bits (77), Expect = 0.26
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 400 GPPCSRDIKRKRKPVATASLSSPSAVHMDAVEPTTPASQAPKSPSS-----EWLVRTSAA 454
GP C + +KRK +S + V+P P + PK PS+ E + T A
Sbjct: 35 GPICQKTATKKRKTF-DSSRQRAEGTDIPTVKPLKPRPEPPKKPSNWRRKHEEFIATIRA 93
Query: 455 EKATDATTATFFKMPQEKSPGY 476
K D K+P P Y
Sbjct: 94 AKGLDQALKEGGKLPPPPPPSY 115
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.26
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 20/146 (13%)
Query: 124 RPLRRRRKVKRVTSEVAA-------SLQQKLKVSDWS----------YERGCRFKSAKKQ 166
R RRK + EV+A K+K S WS +E G K K++
Sbjct: 194 RRAEERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEE 253
Query: 167 RLSRWK--ENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS-DENMSECET 223
++ + S SAE+ + S +G +E E E +E+++GS E E E
Sbjct: 254 KMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEE 313
Query: 224 SSVCSSSDTGLFTNDEGRQGDDEQSD 249
+TG + + Q +E S+
Sbjct: 314 EEEEEEEETGSNSEEASEQSAEEVSE 339
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.26
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 20/146 (13%)
Query: 124 RPLRRRRKVKRVTSEVAA-------SLQQKLKVSDWS----------YERGCRFKSAKKQ 166
R RRK + EV+A K+K S WS +E G K K++
Sbjct: 194 RRAEERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEE 253
Query: 167 RLSRWK--ENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS-DENMSECET 223
++ + S SAE+ + S +G +E E E +E+++GS E E E
Sbjct: 254 KMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEE 313
Query: 224 SSVCSSSDTGLFTNDEGRQGDDEQSD 249
+TG + + Q +E S+
Sbjct: 314 EEEEEEEETGSNSEEASEQSAEEVSE 339
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 33.5 bits (75), Expect = 0.44
Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 45/185 (24%)
Query: 26 EEMALSPRQQR------RQLRKRRGRKRRSDFTHLAEHTCCYSEASESSLDEATKDCREV 79
EE +S Q+ +Q+ R R+ ++ L E+ EA ++S + RE
Sbjct: 1760 EERIISATSQKEAHLNVQQIVDRHTRELKTQVEDLNENLLKLKEALKTSKN------REN 1813
Query: 80 APVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTENAPCRPLRRRRKVKRVTS-- 137
+ N +D ++ + K+ A N I++ K+ E+D +R++KR+TS
Sbjct: 1814 SLTDNLNDLNNEL-QKKQKAYNKILREKEEIDQENDEL-----------KRQIKRLTSGL 1861
Query: 138 ----------EVAASLQQKLKVSDWSYE--------RGCRFKSAKKQRLSRWKENTPWTS 179
+ LQ+K+K + E + + K+AK++ L RW+E W +
Sbjct: 1862 QGKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLKPMKEKNAKEE-LIRWEEGKKWQA 1920
Query: 180 SGHGL 184
G+
Sbjct: 1921 KIEGI 1925
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 32.7 bits (73), Expect = 0.74
Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 52/262 (19%)
Query: 7 DLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCCYSEASE 66
D+++ L++ ++NK R QR +R+ R+R +D S+
Sbjct: 1062 DISTILDEERKENK------------RPQRAAAARRKKRRRLNDLD------------SD 1097
Query: 67 SSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTE------- 119
S+LDE ++ + +++ S D+ +V+ +P +S++ DS T+
Sbjct: 1098 SNLDE--EESEDEFKISDGSQ-DEFVVSDENPD-----ESEEDPPSNDDSDTDFCSRRLR 1149
Query: 120 NAPCRPLRRRRKVKRVT---------SEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSR 170
P RP+R+ R+++R T E + + SD+S + F +++R R
Sbjct: 1150 RHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVETRRRRSRR 1209
Query: 171 WKE---NTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVC 227
++ N S G +S + + ++ E++E + E S
Sbjct: 1210 NQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYLSKNSEDDELAKESKR 1269
Query: 228 SSSDTGLFTNDEGRQGDDEQSD 249
S G T DE + D+E+ +
Sbjct: 1270 SVRKRGRST-DEYSEADEEEEE 1290
>gi|26051223 sperm-associated cation channel 2 isoform 2 [Homo
sapiens]
Length = 530
Score = 32.7 bits (73), Expect = 0.74
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 11 ALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLA---EHTCCYSEASES 67
A+ T+ QN EL EEMA Q + + KR+ +RR + +H A H+ + +
Sbjct: 338 AMMVTNFQNIRKELNEEMARREVQLKADMFKRQIIQRRKNMSHEALTSSHSKIEDSSRGA 397
Query: 68 SLDEATKDCREVAPV------------TNFSDSDDTMVAKRHPALNAIVKSKQHSWHES 114
S + D EV+ V T+ S +++T+ KR ++ V S S+ S
Sbjct: 398 SQQRESLDLSEVSEVESNYGATEEDLITSASKTEETLSKKREYQSSSCVSSTSSSYSSS 456
>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 487
Score = 32.3 bits (72), Expect = 0.97
Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 155 ERGCRFKSAKKQRLSRWKENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS 214
+R + K ++ ++ ++ ++ +G+ ++A+++ K +E E E DE+++
Sbjct: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSK---KKKEEEENEEDEEDEEEEKD 338
Query: 215 DENMSECETSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVP 258
+E+ E + +++ GDDEQS W C P
Sbjct: 339 EEDEDEED--------------DEDEEDGDDEQSHWQLFLACCP 368
>gi|169234787 hypothetical protein LOC55683 isoform a [Homo sapiens]
Length = 878
Score = 32.3 bits (72), Expect = 0.97
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 394 QANVHWGP-PCSRDIKRKRKPVATASLSSPSAVHMDAVEPTTPASQAPKSPS-SEWLVRT 451
+A H G P +D ++K+KP A V P +PA++ P SPS SE L
Sbjct: 474 RAEGHMGSEPRDQDAEKKKKPRDVARRDLAFEVPERGSRPASPAAKLPASPSGSEDLSSV 533
Query: 452 SAAEKATDATTATFFKMPQEKS 473
S++ ++ T T Q+ S
Sbjct: 534 SSSPTSSPKTKVTTVTSAQKSS 555
>gi|21361734 hypothetical protein LOC55683 isoform b [Homo sapiens]
Length = 791
Score = 32.3 bits (72), Expect = 0.97
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 394 QANVHWGP-PCSRDIKRKRKPVATASLSSPSAVHMDAVEPTTPASQAPKSPS-SEWLVRT 451
+A H G P +D ++K+KP A V P +PA++ P SPS SE L
Sbjct: 387 RAEGHMGSEPRDQDAEKKKKPRDVARRDLAFEVPERGSRPASPAAKLPASPSGSEDLSSV 446
Query: 452 SAAEKATDATTATFFKMPQEKS 473
S++ ++ T T Q+ S
Sbjct: 447 SSSPTSSPKTKVTTVTSAQKSS 468
>gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens]
Length = 692
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 18/94 (19%)
Query: 106 SKQHSWHESDSFTENAPCRPLRRRRKV-KRVTSE---------------VAASLQQKLKV 149
S++ SWH S + ++ CR L + ++ K +E V ++KL
Sbjct: 521 SQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY 580
Query: 150 SDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHG 183
DW GC S Q L W ++T + S G
Sbjct: 581 PDWG--SGCYQVSCSPQGLKVWVQDTSYLCSRAG 612
>gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens]
Length = 655
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 18/94 (19%)
Query: 106 SKQHSWHESDSFTENAPCRPLRRRRKV-KRVTSE---------------VAASLQQKLKV 149
S++ SWH S + ++ CR L + ++ K +E V ++KL
Sbjct: 484 SQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY 543
Query: 150 SDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHG 183
DW GC S Q L W ++T + S G
Sbjct: 544 PDWG--SGCYQVSCSPQGLKVWVQDTSYLCSRAG 575
>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 486
Score = 32.0 bits (71), Expect = 1.3
Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 155 ERGCRFKSAKKQRLSRWKENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGS 214
+R + K ++ ++ ++ ++ +G+ ++A+++ +KE E E DE+ +
Sbjct: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKK------KKEEEENEEDEEDEEE 335
Query: 215 DENMSECETSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVP 258
+++ E E +++ GDDEQS W C P
Sbjct: 336 EKDEDEDEED------------DEDEEDGDDEQSHWQLFLACCP 367
>gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo
sapiens]
Length = 501
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 391 SARQANVHWGPPCSRDIKRKRKPVATASLSSPSAVHMDAVEPTTPASQAPKSPSSEWLVR 450
SA WGP + KR R VA P H A+ T P QA + + E+LV
Sbjct: 289 SAETTEAEWGPAAWPEDKRARLSVAAPC--QPRPTHFVALMVTEPGLQAEVTKAQEYLVH 346
Query: 451 TS 452
+
Sbjct: 347 VA 348
>gi|223890197 mouse double minute 2 homolog isoform MDM2f [Homo
sapiens]
Length = 452
Score = 31.6 bits (70), Expect = 1.7
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 176 PWTSSGH-GLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVC-----SS 229
P TSS + E+ EN LS G ++R ++D DE+++ C +C SS
Sbjct: 117 PSTSSRRRAISETEENSDELS--GERQRKRHKSDSISLSFDESLALCVIREICCERSSSS 174
Query: 230 SDTGLFTNDEGRQGDDEQS-DWFYEGECVPGFTV 262
TG +N + G E S DW + F+V
Sbjct: 175 ESTGTPSNPDLDAGVSEHSGDWLDQDSVSDQFSV 208
>gi|89993689 mouse double minute 2 homolog isoform MDM2 [Homo
sapiens]
Length = 497
Score = 31.6 bits (70), Expect = 1.7
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 176 PWTSSGH-GLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVC-----SS 229
P TSS + E+ EN LS G ++R ++D DE+++ C +C SS
Sbjct: 162 PSTSSRRRAISETEENSDELS--GERQRKRHKSDSISLSFDESLALCVIREICCERSSSS 219
Query: 230 SDTGLFTNDEGRQGDDEQS-DWFYEGECVPGFTV 262
TG +N + G E S DW + F+V
Sbjct: 220 ESTGTPSNPDLDAGVSEHSGDWLDQDSVSDQFSV 253
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 31.2 bits (69), Expect = 2.2
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Query: 342 HIISDPRQKDFWLPSAGKRERNQFNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGP 401
H ++P PSAG + P S S +S R P+ +A H
Sbjct: 206 HSTTEPSPAARRRPSAGGGLQR---PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ 262
Query: 402 PCSRDIKRKRKPVATASL--SSPSAVHMDAVEPTTPASQAPKSPSSEWLVRTSAAEKATD 459
P + ++ R P T ++P+ + + TP+ AP SPS+ ++T + AT
Sbjct: 263 PKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATP 322
Query: 460 ATTAT 464
+ AT
Sbjct: 323 PSQAT 327
>gi|16876443 sperm-associated cation channel 2 isoform 1 [Homo
sapiens]
Length = 528
Score = 31.2 bits (69), Expect = 2.2
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 11 ALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCCYS-------- 62
A+ T+ QN EL EEMA Q + + KR+ +RR + +H A T +S
Sbjct: 338 AMMVTNFQNIRKELNEEMARREVQLKADMFKRQIIQRRKNMSHEA-LTSSHSKIEDRGAS 396
Query: 63 ------EASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHES 114
+ SE S E+ E +T+ S +++T+ KR ++ V S S+ S
Sbjct: 397 QQRESLDLSEVSEVESNYGATEEDLITSASKTEETLSKKREYQSSSCVSSTSSSYSSS 454
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 30.8 bits (68), Expect = 2.8
Identities = 31/153 (20%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
Query: 1 MDELVHDLASALEQTS---EQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEH 57
+ +L LA EQ + +QN + E++ Q R L +GR + D + L ++
Sbjct: 1529 LQQLQSQLAHQTEQKTLQKQQNTCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKN 1588
Query: 58 TCCYSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSF 117
+ + + AT V + F + + T ++ R L A+ + + + ++
Sbjct: 1589 QSDLKDLQDDIQNRATSFATVVKDIEGFMEENQTKLSPRE--LTALREKLHQAKEQYEAL 1646
Query: 118 TENAPCRPLRRRRKVKRVTSEVAASLQQKLKVS 150
E R K + V ++LQQ+ + S
Sbjct: 1647 QEET-------RVAQKELEEAVTSALQQETEKS 1672
>gi|63478060 PHD finger protein 6 isoform 2 [Homo sapiens]
Length = 312
Score = 30.8 bits (68), Expect = 2.8
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 16 SEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCCYSEASESSLDEAT 73
SE L E + E L P + + + R+GR R+++F L+E T S ++ ++
Sbjct: 138 SEAADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSS 195
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.126 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,828,480
Number of Sequences: 37866
Number of extensions: 946308
Number of successful extensions: 3266
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 3194
Number of HSP's gapped (non-prelim): 120
length of query: 477
length of database: 18,247,518
effective HSP length: 106
effective length of query: 371
effective length of database: 14,233,722
effective search space: 5280710862
effective search space used: 5280710862
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.