| Name: PRPF40A | Sequence: fasta or formatted (930aa) | NCBI GI: 151301228 | |
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Description: formin binding protein 3
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Referenced in: Additional Brain Proteins
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.4 78 13 C cysteine 0.5 5 1 D aspartate 4.8 45 4 E glutamate 11.6 108 5 F phenylalanine 2.6 24 2 G glycine 3.9 36 2 H histidine 2.8 26 3 I isoleucine 2.9 27 2 K lysine 10.9 101 3 L leucine 5.4 50 2 M methionine 4.6 43 3 N asparagine 3.3 31 1 P proline 4.6 43 2 Q glutamine 4.1 38 2 R arginine 5.8 54 3 S serine 10.3 96 3 T threonine 6.3 59 3 V valine 3.5 33 2 W tryptophan 1.3 12 1 Y tyrosine 2.3 21 3 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 formin binding protein 3 PRPF40B 0.512 Huntingtin interacting protein C isoform 1 PRPF40B 0.502 Huntingtin interacting protein C isoform 2 TCERG1 0.057 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.055 transcription elongation regulator 1 isoform 1 [Homo... LOC100133599 0.030 PREDICTED: hypothetical protein PRPF38B 0.030 PRP38 pre-mRNA processing factor 38 (yeast) domain ... TCERG1L 0.027 transcription elongation regulator 1-like SFRS12 0.027 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.027 splicing factor, arginine/serine-rich 12 isoform b [... FAM133A 0.026 hypothetical protein LOC286499 LOC100286959 0.026 PREDICTED: hypothetical protein XP_002343921 RBM25 0.025 RNA binding motif protein 25 LOC100133599 0.025 PREDICTED: hypothetical protein RSRC2 0.024 arginine/serine-rich coiled-coil 2 isoform a SFRS4 0.024 splicing factor, arginine/serine-rich 4 ANKRD12 0.024 ankyrin repeat domain 12 isoform 2 ANKRD12 0.024 ankyrin repeat domain 12 isoform 1 ZC3H13 0.024 zinc finger CCCH-type containing 13 LUC7L2 0.023 LUC7-like 2 ZRANB2 0.022 zinc finger protein 265 isoform 1 CCDC55 0.022 coiled-coil domain containing 55 isoform 1 FAM133B 0.022 hypothetical protein LOC257415 isoform 2 FAM133B 0.022 hypothetical protein LOC257415 isoform 1 LOC100134067 0.022 PREDICTED: hypothetical protein PPIG 0.022 peptidylprolyl isomerase G SON 0.022 SON DNA-binding protein isoform F SON 0.022 SON DNA-binding protein isoform B DDX46 0.022 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 CROP 0.021 cisplatin resistance-associated overexpressed protei...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
