Guide to the Human Genome
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Name: LMLN Sequence: fasta or formatted (692aa) NCBI GI: 223468600
Description:

leishmanolysin-like isoform 1

Referenced in:

Metalloproteases

Other entries for this name:
alt prot [655aa] leishmanolysin-like isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         38           2
 C cysteine            4.2         29           1
 D aspartate           4.6         32           1
 E glutamate           6.1         42           2
 F phenylalanine       3.0         21           1
 G glycine             7.4         51           3
 H histidine           3.0         21           2
 I isoleucine          3.2         22           2
 K lysine              4.9         34           2
 L leucine            10.4         72           4
 M methionine          1.9         13           1
 N asparagine          3.8         26           1
 P proline             6.1         42           2
 Q glutamine           4.8         33           2
 R arginine            5.6         39           2
 S serine              7.4         51           3
 T threonine           4.2         29           2
 V valine              7.4         51           2
 W tryptophan          2.6         18           1
 Y tyrosine            4.0         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leishmanolysin-like isoform 1 
LMLN                  0.929   leishmanolysin-like isoform 2 
LOC100293703          0.006   PREDICTED: similar to Uncharacterized protein FLJ42...
LOC100291250          0.006   PREDICTED: hypothetical protein XP_002347362 
LOC100287569          0.006   PREDICTED: hypothetical protein XP_002343249 
ZAN                   0.006   zonadhesin isoform 3 
ZAN                   0.006   zonadhesin isoform 6 
ZNF806                0.006   PREDICTED: zinc finger protein 806 
ZNF806                0.006   PREDICTED: zinc finger protein 806 
ZNF806                0.006   PREDICTED: zinc finger protein 806 
LGMN                  0.006   legumain preproprotein 
LGMN                  0.006   legumain preproprotein 
C14orf118             0.005   hypothetical protein LOC55668 isoform 2 
C14orf118             0.005   hypothetical protein LOC55668 isoform 1 
CYB561D1              0.004   cytochrome b-561 domain containing 1 isoform 1 [Hom...
COL1A2                0.003   alpha 2 type I collagen 
FER                   0.003   fer (fps/fes related) tyrosine kinase 
C10orf27              0.003   stromal protein associated with thymii and lymph no...
TLK1                  0.003   tousled-like kinase 1 isoform 3 
TLK1                  0.003   tousled-like kinase 1 isoform 2 
TLK1                  0.003   tousled-like kinase 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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