Guide to the Human Genome
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Name: LENG9 Sequence: fasta or formatted (501aa) NCBI GI: 206725452
Description:

leukocyte receptor cluster (LRC) member 9

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.8         74           3
 C cysteine            2.4         12           1
 D aspartate           2.2         11           1
 E glutamate           7.6         38           2
 F phenylalanine       3.4         17           2
 G glycine             9.6         48           2
 H histidine           2.8         14           1
 I isoleucine          1.2          6           1
 K lysine              2.0         10           2
 L leucine            11.4         57           2
 M methionine          0.8          4           1
 N asparagine          0.8          4           1
 P proline            11.2         56           3
 Q glutamine           5.0         25           1
 R arginine            8.2         41           2
 S serine              4.0         20           2
 T threonine           5.8         29           2
 V valine              5.2         26           1
 W tryptophan          1.4          7           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leukocyte receptor cluster (LRC) member 9 
NUPL2                 0.022   nucleoporin like 2 
SAMD1                 0.016   sterile alpha motif domain containing 1 
UBN2                  0.015   ubinuclein 2 
TBKBP1                0.014   TBK1 binding protein 1 
ZC3H18                0.014   zinc finger CCCH-type containing 18 
LTBP3                 0.013   latent transforming growth factor beta binding prot...
LOC100291075          0.013   PREDICTED: hypothetical protein XP_002346651 
LOC100288832          0.013   PREDICTED: hypothetical protein XP_002342488 
AGAP2                 0.012   centaurin, gamma 1 isoform PIKE-L 
NISCH                 0.012   nischarin 
C2orf55               0.012   hypothetical protein LOC343990 
LOC100130837          0.011   PREDICTED: hypothetical protein 
LOC100130837          0.011   PREDICTED: hypothetical protein 
LOC729370             0.011   PREDICTED: hypothetical protein 
EDN3                  0.011   endothelin 3 isoform 1 preproprotein 
EDN3                  0.011   endothelin 3 isoform 3 preproprotein 
EDN3                  0.011   endothelin 3 isoform 2 preproprotein 
EDN3                  0.011   endothelin 3 isoform 1 preproprotein 
LOC100290946          0.010   PREDICTED: hypothetical protein XP_002347121 
LOC100288840          0.010   PREDICTED: hypothetical protein XP_002344246 
WIPF3                 0.010   WAS/WASL interacting protein family, member 3 [Homo...
SETD1B                0.010   SET domain containing 1B 
SPEG                  0.010   SPEG complex locus 
FAM75C1               0.010   family with sequence similarity 75, member C1 [Homo...
BAT2                  0.010   HLA-B associated transcript-2 
CBX6                  0.010   chromobox homolog 6 
LOC100288181          0.010   PREDICTED: hypothetical protein 
LOC100288422          0.010   PREDICTED: hypothetical protein 
LOC100288181          0.010   PREDICTED: hypothetical protein XP_002342920 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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