Guide to the Human Genome
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Search of human proteins with 39930602

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|39930602 TATA box binding protein like 2 [Homo sapiens]
         (375 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|39930602 TATA box binding protein like 2 [Homo sapiens]            749   0.0  
gi|4507379 TATA box binding protein [Homo sapiens]                    369   e-102
gi|4759234 TBP-like 1 [Homo sapiens]                                  135   6e-32
gi|112421108 capicua homolog [Homo sapiens]                            45   1e-04
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             44   3e-04
gi|55749769 CWC22 spliceosome-associated protein homolog [Homo s...    40   0.004
gi|153792294 myopalladin [Homo sapiens]                                39   0.006
gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2...    39   0.008
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    38   0.013
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    38   0.017
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu...    38   0.017
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre...    38   0.017
gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1...    36   0.049
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa...    36   0.049
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap...    36   0.064
gi|118918411 zinc finger protein 777 [Homo sapiens]                    35   0.084
gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens]    35   0.084
gi|146134388 YLP motif containing 1 [Homo sapiens]                     35   0.084
gi|15451916 bone morphogenetic protein receptor type II precurso...    35   0.11 
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        35   0.11 
gi|74027251 tripartite motif-containing 33 protein isoform beta ...    35   0.14 
gi|74027249 tripartite motif-containing 33 protein isoform alpha...    35   0.14 
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    35   0.14 
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    35   0.14 
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    35   0.14 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        35   0.14 
gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens]       34   0.19 
gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens]     34   0.19 
gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens]     34   0.19 
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]     34   0.19 

>gi|39930602 TATA box binding protein like 2 [Homo sapiens]
          Length = 375

 Score =  749 bits (1934), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)

Query: 1   MASAPWPERVPRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPL 60
           MASAPWPERVPRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPL
Sbjct: 1   MASAPWPERVPRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPL 60

Query: 61  FSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHE 120
           FSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHE
Sbjct: 61  FSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHE 120

Query: 121 TEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSL 180
           TEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSL
Sbjct: 121 TEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSL 180

Query: 181 ASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMR 240
           ASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMR
Sbjct: 181 ASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMR 240

Query: 241 IREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCD 300
           IREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCD
Sbjct: 241 IREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCD 300

Query: 301 VRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYE 360
           VRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYE
Sbjct: 301 VRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYE 360

Query: 361 AFENIYPILKGFKKA 375
           AFENIYPILKGFKKA
Sbjct: 361 AFENIYPILKGFKKA 375


>gi|4507379 TATA box binding protein [Homo sapiens]
          Length = 339

 Score =  369 bits (948), Expect = e-102
 Identities = 204/350 (58%), Positives = 237/350 (67%), Gaps = 21/350 (6%)

Query: 33  MEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSG 92
           M+Q  + L  Y    A+  G   P  P+FSP++PY   +             P+  + + 
Sbjct: 1   MDQNNS-LPPYAQGLASPQGAMTPGIPIFSPMMPYGTGL------------TPQPIQNTN 47

Query: 93  DFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDVGLGLNSSSLS 152
             S ++      +  Q+ + Q    + + ++  + Q  Q +     +Q V       S S
Sbjct: 48  SLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTS 107

Query: 153 NSHSQ--------LHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTPISECCGIVPQLQN 204
              +Q        L    T +  P P         +  +TP+TP TP SE  GIVPQLQN
Sbjct: 108 QQATQGTSGQAPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQN 167

Query: 205 IVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSE 264
           IVSTVNL CKLDLK IAL A+NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSE
Sbjct: 168 IVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSE 227

Query: 265 EQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPEL 324
           EQSRLAARKYARVVQKLGFPA+FLDFKIQNMVGSCDV+FPIRLEGLVLTHQQFSSYEPEL
Sbjct: 228 EQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPEL 287

Query: 325 FPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 374
           FPGLIYRM+KPRIVLLIFVSGKVVLTGAK R+EIYEAFENIYPILKGF+K
Sbjct: 288 FPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337


>gi|4759234 TBP-like 1 [Homo sapiens]
          Length = 186

 Score =  135 bits (340), Expect = 6e-32
 Identities = 70/168 (41%), Positives = 104/168 (61%), Gaps = 2/168 (1%)

Query: 202 LQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 261
           + N+V      C L+L+KIAL   N  Y  +    V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13  ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71

Query: 262 KSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 321
            SEE+++  AR+ AR +QKLGF   F DFK+ N++  C++ F IRL      ++  +SYE
Sbjct: 72  TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131

Query: 322 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 369
           PEL P + YR+   R  L IF +G + +TG   ++ +  A E IYP +
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKA-VATAVEQIYPFV 178


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 55/206 (26%), Positives = 79/206 (38%), Gaps = 17/206 (8%)

Query: 5    PWPERVPRLLAPRLPSYPP-PPPTVGLRSMEQEETYLELY----LDQCAAQDGLA----P 55
            P P  +P    P   S PP PPP     S +  ET    +     D      GL     P
Sbjct: 1230 PAPPPLPETWTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEP 1289

Query: 56   PRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPV 115
            P  P  +P         + S+   A    PE KE +G    V +   P + T ++ D  V
Sbjct: 1290 PTPPSPAPAPAVAPGGSSESSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRV 1349

Query: 116  ISKHETEENSESQS---PQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEK 172
            +S+ + EE         P+  LPSP+ Q   L  +  ++  S+ +     TD +  +PE 
Sbjct: 1350 LSEVDFEERFAELPEFRPEEVLPSPTLQ--SLATSPRAILGSYRKKRKNSTD-LDSAPED 1406

Query: 173  PNSDSLSL--ASITPMTPMTPISECC 196
            P S    +   S     P TP S  C
Sbjct: 1407 PTSPKRKMRRRSSCSSEPNTPKSAKC 1432


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 56/203 (27%), Positives = 77/203 (37%), Gaps = 33/203 (16%)

Query: 5    PWPERV-PRLLAPRL--------PSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAP 55
            PWPER  PR  A R         PS  P PP   L S    E      L   A  D  AP
Sbjct: 988  PWPERRPPRPAATRTAPPTPSPGPSASPGPPGPALTSDSSRELTPHSALTSEATSD--AP 1045

Query: 56   PRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDF--SSVDLSFLPDEVTQENKDQ 113
              SP                 PD A  +NP++  TS DF  S+ D S +P    + +   
Sbjct: 1046 DTSP---------------PTPDPASRTNPDLILTSPDFALSTPDSSVVPALTPEPSPTP 1090

Query: 114  -PVISKHETEENSESQSPQSRLPSPS---EQDVGLGLNSSSLSNSHSQLHPGDTDSVQPS 169
             P + K  T + S      S  P+     E D    L+++  S++ S+       S  P 
Sbjct: 1091 LPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTTPDLDTTPYSSTVSEYSRSPDPSPSPH 1150

Query: 170  PEKPNSDSLSLASITPMTP-MTP 191
            P      +++   IT + P +TP
Sbjct: 1151 PTTTPDPTMAPDPITTLNPTVTP 1173


>gi|55749769 CWC22 spliceosome-associated protein homolog [Homo
           sapiens]
          Length = 908

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 17/111 (15%)

Query: 59  PLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQP---V 115
           P F  ++P D    N  N   A N           F+S+ L  L DE+ +  K+ P   V
Sbjct: 610 PFFEGLLPRD----NPRNTRFAINF----------FTSIGLGGLTDELREHLKNTPKVIV 655

Query: 116 ISKHETEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSV 166
             K + E+N  S S  S   S SE D     + SS S+S S     D+ S+
Sbjct: 656 AQKPDVEQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEESDSSSI 706


>gi|153792294 myopalladin [Homo sapiens]
          Length = 1320

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)

Query: 19  PSYP--PPPPTVG---LRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILN 73
           PS P   PPP +    L S + ++ + ++ L+Q   Q+   PP SP      P+ M +LN
Sbjct: 642 PSSPVKEPPPVLAKPKLDSTQLQQLHNQVLLEQHQLQN--PPPSSP---KEFPFSMTVLN 696

Query: 74  ASNPDTAFNSNPEVKETSGDFSSV--DLSFLPD----EVTQENKDQPVISKHETEEN-SE 126
           ++ P     S+ +VK  S    S+     F P       T      PV +   T +    
Sbjct: 697 SNAPPAVTTSSKQVKAPSSQTFSLARPKYFFPSTNTTAATVAPSSSPVFTLSSTPQTIQR 756

Query: 127 SQSPQSRLPS-PSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQP--SPEKPNSDSLSLASI 183
           + S +S L S PS Q    G     LS  +  L PG T+   P  +   P+ +      +
Sbjct: 757 TVSKESLLVSHPSVQTKSPG----GLSIQNEPLPPGPTEPTPPPFTFSIPSGNQFQPRCV 812

Query: 184 TPMTPMTPISECCGIVPQLQNIVSTV 209
           +P+ P++P S     V  L +++ ++
Sbjct: 813 SPI-PVSPTSRIQNPVAFLSSVLPSL 837


>gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2
           [Homo sapiens]
          Length = 659

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 48  AAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVT 107
           AAQ GL P R       +P   ++++ ++ +  F +  E+  T      V + +L    T
Sbjct: 118 AAQSGL-PVRIESIKCELPLPRFMMSKNDGEIRFGNPAELHGTK-----VQIPYL---TT 168

Query: 108 QENKDQPVISKHETEENSESQSPQSRLPS--PSEQDVGLGLNSSSLSNSHSQLHPGDTDS 165
           ++N  + +  + + E  S + SP +  PS  P  Q V L    S L +S  Q+HP   ++
Sbjct: 169 EKNSFKRMDDEDKQETQSPTMSPLASPPSSPPHYQRVPLSHGYSKLRSSAEQMHPAPYEA 228

Query: 166 VQPSPEKPNSDS 177
            QP  +   S S
Sbjct: 229 RQPLVQPEGSSS 240


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
            sapiens]
          Length = 2231

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 16/180 (8%)

Query: 19   PSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPP--RSPLFSPVVPYDMYILNASN 76
            P   PP PTV  ++ E     ++   +   ++ G  P   +S L +   PY   + N+S+
Sbjct: 858  PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 917

Query: 77   ----PDTAFNSNPEVKETSG------DFSSVDLSFLPDEVTQENKDQPVISKHETEENSE 126
                    ++  P +  +S       D  S   S LP  +  + K++         ++S 
Sbjct: 918  LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKDSY 977

Query: 127  SQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPS--PEKPNSDSLSLASIT 184
            S    S+ P+P    V   ++ SS   S S  H  ++DS+     P+ P+S   S ++ T
Sbjct: 978  SSQGISQPPTPGNLPVPSPMSPSSA--SISSFHGDESDSISSPGWPKTPSSPKSSSSTTT 1035


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
           [Homo sapiens]
          Length = 3969

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 78  DTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLPSP 137
           D++ +S+P V  ++   +S ++  LP+E +   +  P +   ++ EN ES   +SR  S 
Sbjct: 475 DSSRSSSPSVDTSTDSQASEEIQVLPEERSDTPEVHPPLPISQSPEN-ESNDRRSRRYSV 533

Query: 138 SEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTPISECCG 197
           SE+  G        S +  +L      ++Q +P++  S S     +TP  P+ P S    
Sbjct: 534 SERSFG--------SRTTKKL-----STLQSAPQQQTSSSPPPPLLTPPPPLQPASSISD 580

Query: 198 IVPQL 202
             P L
Sbjct: 581 HTPWL 585


>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
           precursor [Homo sapiens]
          Length = 513

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 4/107 (3%)

Query: 76  NPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLP 135
           +P T++  + E  ++S + SS  LS    E  +E  D    S+     N   +SP+S   
Sbjct: 369 DPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQAD----SESSESLNFSEESPESPED 424

Query: 136 SPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLAS 182
             S    GL  +SSS  +   + H  + DS      +   DS S  S
Sbjct: 425 ENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTES 471


>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
           precursor [Homo sapiens]
          Length = 497

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 4/107 (3%)

Query: 76  NPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLP 135
           +P T++  + E  ++S + SS  LS    E  +E  D    S+     N   +SP+S   
Sbjct: 353 DPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQAD----SESSESLNFSEESPESPED 408

Query: 136 SPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLAS 182
             S    GL  +SSS  +   + H  + DS      +   DS S  S
Sbjct: 409 ENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTES 455


>gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1
           [Homo sapiens]
          Length = 660

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 48  AAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVT 107
           AAQ GL P R       +P   ++++ ++ +  F +  E+  T      V + +L  E  
Sbjct: 118 AAQSGL-PVRIESIKCELPLPRFMMSKNDGEIRFGNPAELHGTK-----VQIPYLTTEKN 171

Query: 108 QENKDQPVISKHETEENSESQSPQSRLPS--PSEQDVGLGLNSSSLSNSHSQLHPGDTDS 165
              +      + ET+  S + SP +  PS  P  Q V L    S L +S  Q+HP   ++
Sbjct: 172 SFKRMDDEDKQQETQ--SPTMSPLASPPSSPPHYQRVPLSHGYSKLRSSAEQMHPAPYEA 229

Query: 166 VQPSPEKPNSDS 177
            QP  +   S S
Sbjct: 230 RQPLVQPEGSSS 241


>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
           sapiens]
          Length = 1819

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 22/132 (16%)

Query: 102 LPDEVTQENKDQPVISKHETEENSE---SQSPQSRLPSPSEQDVGLGLNSSSLS------ 152
           L DE   +   + V   H+ +E  +   S  PQ   P P   + G G +S S        
Sbjct: 796 LEDEKHIQEMLKAVSEAHQPQEPPDVLLSVHPQVTSPGPEHPEGGQGCDSGSAEQHSPAW 855

Query: 153 ---NSHSQLHP----------GDTDSVQPSPEKPNSDSLSLASITPMTPMTPISECCGIV 199
              N    L P          G     Q    +P SDSLS+    P+ P    S   G+V
Sbjct: 856 DGWNRPGLLTPQPLKPLAVGAGGRGLQQAEGARPFSDSLSIGDFLPVGPGAEPSVQTGMV 915

Query: 200 PQLQNIVSTVNL 211
           P L+  + T+NL
Sbjct: 916 PLLEVALQTINL 927


>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
           sapiens]
          Length = 525

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 68  DMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSES 127
           D Y   A   D    S P++ E   +   V  S   +E  +E +++    + E EE+SE 
Sbjct: 278 DKYRSEALPTDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEV 337

Query: 128 QSPQSRLPSPSEQD 141
           Q  Q +  SP+E+D
Sbjct: 338 QGEQPKPASPAEED 351


>gi|118918411 zinc finger protein 777 [Homo sapiens]
          Length = 831

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 46/165 (27%), Positives = 66/165 (40%), Gaps = 27/165 (16%)

Query: 32  SMEQEETYLELYLD---QCAAQDGLAPPRS-PLFSPVVPYDMYILNASNPDTAFNSNPEV 87
           S+ QEET  +       +   Q  + PP+  P  SP +P        S P T   S+   
Sbjct: 13  SVPQEETLRQAPAGLPRETLFQSRVLPPKEIPSLSPTIPRQ-----GSLPQT---SSAPK 64

Query: 88  KETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDVGLGLN 147
           +ETSG    V L   P  +     +Q    +        +Q P    P+ +EQ+V L   
Sbjct: 65  QETSGRMPHV-LQKGPSLLCSAASEQETSLQGPLASQEGTQYPP---PAAAEQEVSL--- 117

Query: 148 SSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTPI 192
                 SHS  H    ++   SPE P  D L+L+   P T M P+
Sbjct: 118 -----LSHSPHHQ---EAPVHSPEAPEKDPLTLSPTVPETDMDPL 154


>gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens]
          Length = 330

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 1   MASAPWPERVPRLLAPRLPSYPPPP----PTVGLRSMEQEETYLELY-LDQCAAQD-GLA 54
           +ASA WPER  R  +PR P  P       P    RS+     +  ++ L++CA  + G +
Sbjct: 248 VASADWPERAARPPSPRPPGAPESRGLWLPRRPARSVGSASVFCHVHKLERCARDNLGFS 307

Query: 55  PPRSP 59
           PP SP
Sbjct: 308 PPSSP 312


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 45/178 (25%), Positives = 63/178 (35%), Gaps = 33/178 (18%)

Query: 19  PSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPR--SPLFSPVVPYDMYILNASN 76
           P   PPPP   L   +Q++   ++   Q     GL P    SP  SP VP   Y+     
Sbjct: 104 PPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYM----P 159

Query: 77  PDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSR--- 133
           P  ++   P+                P         QP +   +    S SQSP S+   
Sbjct: 160 PSQSYMPPPQP---------------PPSYYPPTSSQPYLPPAQP---SPSQSPPSQSYL 201

Query: 134 LPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTP 191
            P+PS        +SSS S S+         S Q SP +P+        + P  P  P
Sbjct: 202 APTPSYS------SSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAP 253


>gi|15451916 bone morphogenetic protein receptor type II precursor
           [Homo sapiens]
          Length = 1038

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 13/125 (10%)

Query: 66  PYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENS 125
           PY  Y  ++   D+  +++  VK  S + S   +S  P  + ++N++           N 
Sbjct: 542 PYPDYSSSSYIEDSIHHTDSIVKNISSEHS---MSSTPLTIGEKNRNSI---------NY 589

Query: 126 ESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPG-DTDSVQPSPEKPNSDSLSLASIT 184
           E Q  Q+R+PSP      L  N+++ + +      G  T S  P P++ N  + ++A   
Sbjct: 590 ERQQAQARIPSPETSVTSLSTNTTTTNTTGLTPSTGMTTISEMPYPDETNLHTTNVAQSI 649

Query: 185 PMTPM 189
             TP+
Sbjct: 650 GPTPV 654


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 48/203 (23%), Positives = 72/203 (35%), Gaps = 46/203 (22%)

Query: 23   PPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVV--PYDMYILNASNPDTA 80
            P PP+     +E+  TY                 RSP  +P    P        S   T 
Sbjct: 2231 PSPPSTATAPVEESTTY----------------HRSPGSTPTTHFPASSTTSGHSEKSTI 2274

Query: 81   FNSNPEVKETSGDFS------------------SVDLSFLPDEVTQENKDQPVISKHETE 122
            F+S+P+   T+   +                  S +++ LP   T      P +S+  T 
Sbjct: 2275 FHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTT-----PGLSEASTT 2329

Query: 123  ENSESQSPQSRLPSPSEQDVGLGLNS----SSLSNSHSQLHPGDTDSVQPSPEKPNSDSL 178
              S  +SP + L   S   +G+G  S    S   ++HS + P  T +   S E     S 
Sbjct: 2330 FYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVSPASTTTPGLSEESTTVYSS 2389

Query: 179  SLASI-TPMTPMTPISECCGIVP 200
            S  S  T + P TP +   G  P
Sbjct: 2390 SPGSTETTVFPRTPTTSVRGEEP 2412



 Score = 32.0 bits (71), Expect = 0.93
 Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 47/182 (25%)

Query: 23   PPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVV--PYDMYILNASNPDTA 80
            P PP+     +E+  TY                 RSP  +P    P        S   T 
Sbjct: 1148 PSPPSTATAPVEESTTY----------------HRSPGSTPTTHFPASSTTSGHSEKSTI 1191

Query: 81   FNSNPEVKETSGDFS------------------SVDLSFLPDEVTQENKDQPVISKHETE 122
            F+S+P+   T+   +                  S +++ LP   T      P +S+  T 
Sbjct: 1192 FHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTT-----PGLSEASTT 1246

Query: 123  ENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLAS 182
              S  +SP + L   S   +G+G  S++     S+  PG T S   SP    +  LS  S
Sbjct: 1247 FYSSPRSPTTTLSPASMTSLGVGEESTT-----SRSQPGSTHST-VSPASTTTPGLSEES 1300

Query: 183  IT 184
             T
Sbjct: 1301 TT 1302



 Score = 32.0 bits (71), Expect = 0.93
 Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 47/182 (25%)

Query: 23   PPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVV--PYDMYILNASNPDTA 80
            P PP+     +E+  TY                 RSP  +P    P        S   T 
Sbjct: 2705 PSPPSTATAPVEESTTY----------------HRSPGSTPTTHFPASSTTSGHSEKSTI 2748

Query: 81   FNSNPEVKETSGDFS------------------SVDLSFLPDEVTQENKDQPVISKHETE 122
            F+S+P+   T+   +                  S +++ LP   T      P +S+  T 
Sbjct: 2749 FHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTT-----PGLSEASTT 2803

Query: 123  ENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLAS 182
              S  +SP + L   S   +G+G  S++     S+  PG T S   SP    +  LS  S
Sbjct: 2804 FYSSPRSPTTTLSPASMTSLGVGEESTT-----SRSQPGSTHST-VSPASTTTPGLSEES 2857

Query: 183  IT 184
             T
Sbjct: 2858 TT 2859



 Score = 32.0 bits (71), Expect = 0.93
 Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 47/182 (25%)

Query: 23   PPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVV--PYDMYILNASNPDTA 80
            P PP+     +E+  TY                 RSP  +P    P        S   T 
Sbjct: 3788 PSPPSTATAPVEESTTY----------------HRSPGSTPTTHFPASSTTSGHSEKSTI 3831

Query: 81   FNSNPEVKETSGDFS------------------SVDLSFLPDEVTQENKDQPVISKHETE 122
            F+S+P+   T+   +                  S +++ LP   T      P +S+  T 
Sbjct: 3832 FHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTT-----PGLSEASTT 3886

Query: 123  ENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLAS 182
              S  +SP + L   S   +G+G  S++     S+  PG T S   SP    +  LS  S
Sbjct: 3887 FYSSPRSPTTTLSPASMTSLGVGEESTT-----SRSQPGSTHST-VSPASTTTPGLSEES 3940

Query: 183  IT 184
             T
Sbjct: 3941 TT 3942


>gi|74027251 tripartite motif-containing 33 protein isoform beta
           [Homo sapiens]
          Length = 1110

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 43/167 (25%), Positives = 65/167 (38%), Gaps = 31/167 (18%)

Query: 15  APRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNA 74
           A R+P  P        R    + + ++ +L +  +  G A P      PVV      +N 
Sbjct: 596 AARIPGIP--------RHSGPQYSMMQPHLQRQHSNPGHAGP-----FPVVSVHNTTINP 642

Query: 75  SNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQ-PVISKHETEENSESQSPQ-- 131
           ++P TA  +N     TS   ++++L  +P     EN    P I   + E+   S      
Sbjct: 643 TSPTTATMANANRGPTSPSVTAIEL--IPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLL 700

Query: 132 ------SRLP-------SPSEQDVGLGLNSSSLSNSHSQLHPGDTDS 165
                 S LP       +PS     L   SS LSNSH+ + P  T S
Sbjct: 701 SRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSS 747


>gi|74027249 tripartite motif-containing 33 protein isoform alpha
           [Homo sapiens]
          Length = 1127

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 43/167 (25%), Positives = 65/167 (38%), Gaps = 31/167 (18%)

Query: 15  APRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNA 74
           A R+P  P        R    + + ++ +L +  +  G A P      PVV      +N 
Sbjct: 596 AARIPGIP--------RHSGPQYSMMQPHLQRQHSNPGHAGP-----FPVVSVHNTTINP 642

Query: 75  SNPDTAFNSNPEVKETSGDFSSVDLSFLPDEVTQENKDQ-PVISKHETEENSESQSPQ-- 131
           ++P TA  +N     TS   ++++L  +P     EN    P I   + E+   S      
Sbjct: 643 TSPTTATMANANRGPTSPSVTAIEL--IPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLL 700

Query: 132 ------SRLP-------SPSEQDVGLGLNSSSLSNSHSQLHPGDTDS 165
                 S LP       +PS     L   SS LSNSH+ + P  T S
Sbjct: 701 SRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSS 747


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 31/165 (18%)

Query: 9   RVPRLLAPRLPSYPPP-----------PPTVGLRSMEQEETYLELY-----LDQCAAQDG 52
           ++P LL P  PS PPP           PP +    +    +    +     L    AQ  
Sbjct: 759 QLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSP 818

Query: 53  L---APPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDE---- 105
           L   +P  SP  SP+ P +  +  AS      +S+     +S  FSS   S  P      
Sbjct: 819 LPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLS 878

Query: 106 ------VTQENKDQ--PVISKHETEENSESQSPQSRLPSPSEQDV 142
                  + +N +   P+IS  + E  +E   P+    S +EQDV
Sbjct: 879 AISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDV 923


>gi|20336260 retinoblastoma protein-binding zinc finger protein
            isoform b [Homo sapiens]
          Length = 1682

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 31/165 (18%)

Query: 9    RVPRLLAPRLPSYPPP-----------PPTVGLRSMEQEETYLELY-----LDQCAAQDG 52
            ++P LL P  PS PPP           PP +    +    +    +     L    AQ  
Sbjct: 960  QLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSP 1019

Query: 53   L---APPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDE---- 105
            L   +P  SP  SP+ P +  +  AS      +S+     +S  FSS   S  P      
Sbjct: 1020 LPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLS 1079

Query: 106  ------VTQENKDQ--PVISKHETEENSESQSPQSRLPSPSEQDV 142
                   + +N +   P+IS  + E  +E   P+    S +EQDV
Sbjct: 1080 AISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDV 1124


>gi|20336258 retinoblastoma protein-binding zinc finger protein
            isoform a [Homo sapiens]
          Length = 1718

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 31/165 (18%)

Query: 9    RVPRLLAPRLPSYPPP-----------PPTVGLRSMEQEETYLELY-----LDQCAAQDG 52
            ++P LL P  PS PPP           PP +    +    +    +     L    AQ  
Sbjct: 960  QLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSP 1019

Query: 53   L---APPRSPLFSPVVPYDMYILNASNPDTAFNSNPEVKETSGDFSSVDLSFLPDE---- 105
            L   +P  SP  SP+ P +  +  AS      +S+     +S  FSS   S  P      
Sbjct: 1020 LPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLS 1079

Query: 106  ------VTQENKDQ--PVISKHETEENSESQSPQSRLPSPSEQDV 142
                   + +N +   P+IS  + E  +E   P+    S +EQDV
Sbjct: 1080 AISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDV 1124


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 8/90 (8%)

Query: 103  PDEVTQENKD-QPVISKHETEENSESQSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPG 161
            P E  +E +  +P  +K +   +S S S  S   S S        +SSS S+S S     
Sbjct: 2586 PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S 2642

Query: 162  DTDSVQPSPEKPNSDSLSLASITPMTPMTP 191
             + S  PSP KP   +L      P +P  P
Sbjct: 2643 SSSSSSPSPAKPGPQALP----KPASPKKP 2668



 Score = 29.6 bits (65), Expect = 4.6
 Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 8/163 (4%)

Query: 35   QEETYLELYLDQCAAQDGLAPPRSPLFSP------VVPYDMYILNASNPDTAFNSNPEVK 88
            +E   + L LDQ  +Q  L     P  +         P    + N+   + +F S  E +
Sbjct: 1275 EERPAVSLTLDQSQSQASLEAVEVPSMASSWGGPHFSPEHKELSNSPLRENSFGSPLEFR 1334

Query: 89   ETSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSESQSPQSRLPSPSEQDVGLGLNS 148
             +    + ++  F  +   +E+ + P +++ ET+ + + +   +R    S  ++      
Sbjct: 1335 NSGPLGTEMNTGFSSE--VKEDLNGPFLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVE 1392

Query: 149  SSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPMTP 191
             +  +S+  +     D+V  +P +  S S S   +    P TP
Sbjct: 1393 KAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTP 1435


>gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens]
          Length = 1164

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 45/188 (23%), Positives = 66/188 (35%), Gaps = 34/188 (18%)

Query: 22  PPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAF 81
           PPP P          + Y+ + L Q          R     P +    ++LN    +   
Sbjct: 395 PPPAPLC------HSDDYVHISLPQATVTPPRKEERMDSARPCLHRQHHLLNDRGSE--- 445

Query: 82  NSNPEVKETSGDFSSVDLSFLP---------DEVTQENKDQPVISKHETE---ENSESQS 129
                  E  G   SV LS LP         ++  +++K++  IS+  +E     +E   
Sbjct: 446 -------EPPGSKGSVTLSDLPGFLGDLASEEDSIEKDKEEAAISRELSEITTAEAEPVV 498

Query: 130 PQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPM 189
           P+    SP  +D   G    S   +HS        SV P P   + D L     TP    
Sbjct: 499 PRGGFDSPFYRDSLPG----SQRKTHSAASSSQGASVNPEPLHSSLDKLG--PDTPKQAF 552

Query: 190 TPISECCG 197
           TPI   CG
Sbjct: 553 TPIDLPCG 560


>gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens]
          Length = 1113

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 45/188 (23%), Positives = 66/188 (35%), Gaps = 34/188 (18%)

Query: 22  PPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAF 81
           PPP P          + Y+ + L Q          R     P +    ++LN    +   
Sbjct: 344 PPPAPLC------HSDDYVHISLPQATVTPPRKEERMDSARPCLHRQHHLLNDRGSE--- 394

Query: 82  NSNPEVKETSGDFSSVDLSFLP---------DEVTQENKDQPVISKHETE---ENSESQS 129
                  E  G   SV LS LP         ++  +++K++  IS+  +E     +E   
Sbjct: 395 -------EPPGSKGSVTLSDLPGFLGDLASEEDSIEKDKEEAAISRELSEITTAEAEPVV 447

Query: 130 PQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPM 189
           P+    SP  +D   G    S   +HS        SV P P   + D L     TP    
Sbjct: 448 PRGGFDSPFYRDSLPG----SQRKTHSAASSSQGASVNPEPLHSSLDKLG--PDTPKQAF 501

Query: 190 TPISECCG 197
           TPI   CG
Sbjct: 502 TPIDLPCG 509


>gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens]
          Length = 1163

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 45/188 (23%), Positives = 66/188 (35%), Gaps = 34/188 (18%)

Query: 22  PPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMYILNASNPDTAF 81
           PPP P          + Y+ + L Q          R     P +    ++LN    +   
Sbjct: 394 PPPAPLC------HSDDYVHISLPQATVTPPRKEERMDSARPCLHRQHHLLNDRGSE--- 444

Query: 82  NSNPEVKETSGDFSSVDLSFLP---------DEVTQENKDQPVISKHETE---ENSESQS 129
                  E  G   SV LS LP         ++  +++K++  IS+  +E     +E   
Sbjct: 445 -------EPPGSKGSVTLSDLPGFLGDLASEEDSIEKDKEEAAISRELSEITTAEAEPVV 497

Query: 130 PQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSDSLSLASITPMTPM 189
           P+    SP  +D   G    S   +HS        SV P P   + D L     TP    
Sbjct: 498 PRGGFDSPFYRDSLPG----SQRKTHSAASSSQGASVNPEPLHSSLDKLG--PDTPKQAF 551

Query: 190 TPISECCG 197
           TPI   CG
Sbjct: 552 TPIDLPCG 559


>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
          Length = 1812

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 47/184 (25%), Positives = 71/184 (38%), Gaps = 30/184 (16%)

Query: 11  PRLLAPRLPSYPPPPPTVGLRSMEQEETYLELYLDQCAAQDGLAPPRSPLFSPVVPYDMY 70
           P+   PR P  PPPP        + E+  + L +     +D  AP R   F P+ P    
Sbjct: 177 PQPRGPRTPPGPPPPD-------DDEDDPVPLPVSGDKEED--APHREDYFEPISP---- 223

Query: 71  ILNASNPDTAFNSNPEVKE---TSGDFSSVDLSFLPDEVTQENKDQPVISKHETEENSES 127
             N+   +  ++   EV+E     G+    D+    +E   E+  + V S  E EE  E 
Sbjct: 224 DRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEE 283

Query: 128 QSPQSRLPSPSEQDVGLGLNSSSLSNSHSQLHPGDTDSVQPSPEKPNSD----SLSLASI 183
           +  +       E D G    SS           G  D  + + + PN D    +  LAS+
Sbjct: 284 EEGEE--DEEGEGDDGYEQISSD--------EDGIADLERETFKYPNFDVEYTAEDLASV 333

Query: 184 TPMT 187
            PMT
Sbjct: 334 PPMT 337


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,045,976
Number of Sequences: 37866
Number of extensions: 822245
Number of successful extensions: 6276
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 5890
Number of HSP's gapped (non-prelim): 500
length of query: 375
length of database: 18,247,518
effective HSP length: 104
effective length of query: 271
effective length of database: 14,309,454
effective search space: 3877862034
effective search space used: 3877862034
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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