Guide to the Human Genome
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Name: KIAA1429 Sequence: fasta or formatted (1812aa) NCBI GI: 33946282
Description:

hypothetical protein LOC25962 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {1147aa} hypothetical protein LOC25962 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         91           2
 C cysteine            1.6         29           2
 D aspartate           6.6        119           3
 E glutamate           8.5        154           5
 F phenylalanine       3.6         65           2
 G glycine             6.0        108           2
 H histidine           2.5         46           2
 I isoleucine          4.4         80           2
 K lysine              4.6         83           2
 L leucine            12.4        225           3
 M methionine          2.0         37           2
 N asparagine          3.8         68           2
 P proline             6.3        114          11
 Q glutamine           4.5         82           2
 R arginine            5.1         92           2
 S serine              9.4        170           3
 T threonine           5.3         96           2
 V valine              5.6        102           3
 W tryptophan          0.7         12           1
 Y tyrosine            2.2         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.624   hypothetical protein LOC25962 isoform 2 
PELP1                 0.018   proline, glutamic acid and leucine rich protein 1 [...
EIF5B                 0.012   eukaryotic translation initiation factor 5B 
MYST4                 0.012   MYST histone acetyltransferase (monocytic leukemia)...
MYT1L                 0.012   myelin transcription factor 1-like 
MYT1                  0.011   myelin transcription factor 1 
BPTF                  0.011   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.011   bromodomain PHD finger transcription factor isoform ...
RPGR                  0.011   retinitis pigmentosa GTPase regulator isoform C [Hom...
LOC647020             0.011   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.011   PREDICTED: similar to acidic (leucine-rich) nuclear...
TRIM44                0.011   DIPB protein 
YTHDC1                0.010   splicing factor YT521-B isoform 1 
ANP32B                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
YTHDC1                0.010   splicing factor YT521-B isoform 2 
NCL                   0.010   nucleolin 
ANP32A                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
SCAF1                 0.010   SR-related CTD-associated factor 1 
UBTF                  0.010   upstream binding transcription factor, RNA polymera...
UBTF                  0.010   upstream binding transcription factor, RNA polymera...
UBTF                  0.010   upstream binding transcription factor, RNA polymerase...
TTBK1                 0.009   tau tubulin kinase 1 
SLC24A1               0.009   solute carrier family 24 (sodium/potassium/calcium ex...
TTN                   0.009   titin isoform N2-A 
ANP32E                0.009   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.009   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.009   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ARID3A                0.009   AT rich interactive domain 3A (BRIGHT- like) protein ...
CDC2L2                0.009   cell division cycle 2-like 2 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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