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Search of human proteins with 39777586
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
(1386 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ... 2756 0.0
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1... 614 e-175
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... 598 e-170
gi|67782362 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo sapi... 576 e-164
gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapi... 460 e-129
gi|166851804 tudor domain containing 9 [Homo sapiens] 313 1e-84
gi|38505213 YTH domain containing 2 [Homo sapiens] 281 4e-75
gi|20336290 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ... 256 1e-67
gi|20336294 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ... 256 1e-67
gi|38158022 DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Homo sapi... 240 6e-63
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 230 8e-60
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 196 2e-49
gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens] 196 2e-49
gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapi... 186 1e-46
gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo sapi... 182 3e-45
gi|20544129 DEAH (Asp-Glu-Ala-His) box polypeptide 35 [Homo sapi... 180 7e-45
gi|20336302 DEAH (Asp-Glu-Ala-His) box polypeptide 33 [Homo sapi... 165 3e-40
gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo sapi... 152 2e-36
gi|169211440 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po... 136 2e-31
gi|20336300 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom... 124 6e-28
gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo... 88 7e-17
gi|109452587 family with sequence similarity 98, member B isofor... 53 2e-06
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 52 4e-06
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 52 4e-06
gi|4502565 calpain, small subunit 1 [Homo sapiens] 51 7e-06
gi|51599151 calpain, small subunit 1 [Homo sapiens] 51 7e-06
gi|195972866 keratin 10 [Homo sapiens] 50 2e-05
gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi... 50 2e-05
gi|12056465 fibrillarin [Homo sapiens] 48 6e-05
gi|119395750 keratin 1 [Homo sapiens] 47 1e-04
>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
Length = 1386
Score = 2756 bits (7144), Expect = 0.0
Identities = 1386/1386 (100%), Positives = 1386/1386 (100%)
Query: 1 MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDD 60
MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDD
Sbjct: 1 MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDD 60
Query: 61 GDDFCIFSESRRPSRPSNSNISKGESRPKWKPKAKVPLQTLHMTSENQEKVKALLRDLQE 120
GDDFCIFSESRRPSRPSNSNISKGESRPKWKPKAKVPLQTLHMTSENQEKVKALLRDLQE
Sbjct: 61 GDDFCIFSESRRPSRPSNSNISKGESRPKWKPKAKVPLQTLHMTSENQEKVKALLRDLQE 120
Query: 121 QDADAGSERGLSGEEEDDEPDCCNDERYWPAGQEPSLVPDLDPLEYAGLASVEPYVPEFT 180
QDADAGSERGLSGEEEDDEPDCCNDERYWPAGQEPSLVPDLDPLEYAGLASVEPYVPEFT
Sbjct: 121 QDADAGSERGLSGEEEDDEPDCCNDERYWPAGQEPSLVPDLDPLEYAGLASVEPYVPEFT 180
Query: 181 VSPFAVQKLSRYGFNTERCQAVLRMCDGDVGASLEHLLTQCFSETFGERMKISEAVNQIS 240
VSPFAVQKLSRYGFNTERCQAVLRMCDGDVGASLEHLLTQCFSETFGERMKISEAVNQIS
Sbjct: 181 VSPFAVQKLSRYGFNTERCQAVLRMCDGDVGASLEHLLTQCFSETFGERMKISEAVNQIS 240
Query: 241 LDECMEQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSRFRKSKPKESTKNVQEN 300
LDECMEQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSRFRKSKPKESTKNVQEN
Sbjct: 241 LDECMEQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSRFRKSKPKESTKNVQEN 300
Query: 301 SLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIERSVDDSHLNAIEDASFLYELEIRFS 360
SLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIERSVDDSHLNAIEDASFLYELEIRFS
Sbjct: 301 SLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIERSVDDSHLNAIEDASFLYELEIRFS 360
Query: 361 KDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYDKALTFAETSEPVVYSLITLLEEESE 420
KDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYDKALTFAETSEPVVYSLITLLEEESE
Sbjct: 361 KDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYDKALTFAETSEPVVYSLITLLEEESE 420
Query: 421 IVKLLTNTHHKYSDPPVNFLPVPSRTRINNPACHKTVIPNNSFVSNQIPEVEKASESEES 480
IVKLLTNTHHKYSDPPVNFLPVPSRTRINNPACHKTVIPNNSFVSNQIPEVEKASESEES
Sbjct: 421 IVKLLTNTHHKYSDPPVNFLPVPSRTRINNPACHKTVIPNNSFVSNQIPEVEKASESEES 480
Query: 481 DEDDGPAPVIVENESYVNLKKKISKRYDWQAKSVHAENGKICKQFRMKQASRQFQSILQE 540
DEDDGPAPVIVENESYVNLKKKISKRYDWQAKSVHAENGKICKQFRMKQASRQFQSILQE
Sbjct: 481 DEDDGPAPVIVENESYVNLKKKISKRYDWQAKSVHAENGKICKQFRMKQASRQFQSILQE 540
Query: 541 RQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQ 600
RQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQ
Sbjct: 541 RQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQ 600
Query: 601 PRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQ 660
PRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQ
Sbjct: 601 PRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQ 660
Query: 661 GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITI 720
GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITI
Sbjct: 661 GVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITI 720
Query: 721 PGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLS 780
PGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLS
Sbjct: 721 PGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLS 780
Query: 781 LHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVD 840
LHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVD
Sbjct: 781 LHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVD 840
Query: 841 GKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV 900
GKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV
Sbjct: 841 GKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV 900
Query: 901 KPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 960
KPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ
Sbjct: 901 KPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 960
Query: 961 RKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSV 1020
RKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSV
Sbjct: 961 RKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSV 1020
Query: 1021 FSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRC 1080
FSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRC
Sbjct: 1021 FSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRC 1080
Query: 1081 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR 1140
LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR
Sbjct: 1081 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR 1140
Query: 1141 ASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATG 1200
ASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATG
Sbjct: 1141 ASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATG 1200
Query: 1201 EEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDG 1260
EEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDG
Sbjct: 1201 EEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDG 1260
Query: 1261 YVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRG 1320
YVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRG
Sbjct: 1261 YVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRG 1320
Query: 1321 EFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISTIV 1380
EFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISTIV
Sbjct: 1321 EFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISTIV 1380
Query: 1381 KLVTTQ 1386
KLVTTQ
Sbjct: 1381 KLVTTQ 1386
>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Homo sapiens]
Length = 1008
Score = 614 bits (1583), Expect = e-175
Identities = 372/873 (42%), Positives = 528/873 (60%), Gaps = 71/873 (8%)
Query: 520 KICKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQ 579
K+ + + K+ ++ + R+ LP++ ++ ++NL+ HQV VISG TGCGKTTQ+ Q
Sbjct: 183 KLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQ 242
Query: 580 FILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGL--TVGYQIRLES-VKS 636
FILD+ + I+CTQPRRISAISVAERVA ERAE G + GYQIRL+S +
Sbjct: 243 FILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPR 302
Query: 637 SATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQV 696
+LYCTTG++L+ L+ D L VSHI++DE+HER +SD L+ V+KD+++ R L+V
Sbjct: 303 KQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 362
Query: 697 ILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQI 756
ILMSATLNAE FS+YF +CP+I IPG TFPV ++ LED I RYV + Q
Sbjct: 363 ILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQ----KEHRSQF 418
Query: 757 SKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIK 816
+ ++ NR EE E K+ PD ++L RY S S +
Sbjct: 419 KRGFMQGHVNRQEKEEKEA------------IYKERWPDY---VRELRRRY---SASTVD 460
Query: 817 TMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNR 876
+ +M+ +KV+L LI AL+ +IV + GAILVFLPG I L++ L S +F
Sbjct: 461 VIEMMEDDKVDLNLIVALIRYIVLEEED---GAILVFLPGWDNISTLHDLLMSQVMF--- 514
Query: 877 RSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKE 936
+S++ +I PLHS + + Q VF + P GV KI+I+TNIAETSITIDDVVYVID GK+KE
Sbjct: 515 KSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKE 574
Query: 937 KRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQR 996
+D + ++ +VS+ANA QRKGRAGRV G C+HL+ + L QLPEI R
Sbjct: 575 THFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRAS-LLDDYQLPEILR 633
Query: 997 VPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLG 1056
PLE+LCL+IKIL + + SRL++PP +++ S L +L AL E LTPLG
Sbjct: 634 TPLEELCLQIKILRL---GGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLG 690
Query: 1057 YHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFA- 1115
HLA LPV+ IGK++LFG++F CLDP LTIAASL+FK PFV P K++ A+ ++ E A
Sbjct: 691 VHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAK 750
Query: 1116 FANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGF 1175
SD+L ++ A++GW+ + + G R +YC + FLS LQ + ++K QF E L GF
Sbjct: 751 DTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGF 810
Query: 1176 AREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKF 1235
+ E+N N++N K+I A++CA LYP V +++ GK
Sbjct: 811 VSS-----------------RNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKK 853
Query: 1236 QKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1295
+K +K TK DG V +HP SVN + F +L+YH K++TS +++
Sbjct: 854 RKM-------------VKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLY 900
Query: 1296 DCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCELDQLL 1355
DC+ VS Y L LF GG +++Q + +++D+ WI F + + ++A LVKELR ELD LL
Sbjct: 901 DCTEVSPYCL-LFFGGDISIQKDNDQETIAVDE-WIVFQSPA-RIAHLVKELRKELDILL 957
Query: 1356 QDKIKNP-SIDL-CTCPRGSRIISTIVKLVTTQ 1386
Q+KI++P +D T R ++S I+ L+ TQ
Sbjct: 958 QEKIESPHPVDWNDTKSRDCAVLSAIIDLIKTQ 990
Score = 45.8 bits (107), Expect = 3e-04
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 21/130 (16%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDGDDFCIFSESR 71
G+ GG SS GG GG G GGGGGGGGGG R
Sbjct: 10 GRDGGPRSSGGGYGGGPAGGHGGNRGSGGGGGGGGGGRG-----------------GRGR 52
Query: 72 RPSRPSNSNISKGESRPKWKPKAKVPLQ---TLHMTSENQEKVKALLRDLQEQDADAGSE 128
P I ++ + + + Q +HM +E++ LL +Q ++ D SE
Sbjct: 53 HPGHLKGREIGMWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKN-DKESE 111
Query: 129 RGLSGEEEDD 138
+S +D
Sbjct: 112 AQISWFAPED 121
>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Homo sapiens]
Length = 994
Score = 598 bits (1541), Expect = e-170
Identities = 367/873 (42%), Positives = 517/873 (59%), Gaps = 85/873 (9%)
Query: 520 KICKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQ 579
K+ + + K+ ++ + R+ LP++ ++ ++NL+ HQV VISG TGCGKTTQ+ Q
Sbjct: 183 KLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQ 242
Query: 580 FILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGL--TVGYQIRLES-VKS 636
FILD+ + I+CTQPRRISAISVAERVA ERAE G + GYQIRL+S +
Sbjct: 243 FILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPR 302
Query: 637 SATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQV 696
+LYCTTG++L+ L+ D L VSHI++DE+HER +SD L+ V+KD+++ R L+V
Sbjct: 303 KQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 362
Query: 697 ILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQI 756
ILMSATLNAE FS+YF +CP+I IPG TFPV ++ LED I RYV + Q
Sbjct: 363 ILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQ----KEHRSQF 418
Query: 757 SKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIK 816
+ ++ NR EE E K+ PD ++L RY S S +
Sbjct: 419 KRGFMQGHVNRQEKEEKEA------------IYKERWPDY---VRELRRRY---SASTVD 460
Query: 817 TMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNR 876
+ +M+ +KV+L LI AL+ +IV + GAILVFLPG I L++ L S +F
Sbjct: 461 VIEMMEDDKVDLNLIVALIRYIVLEEED---GAILVFLPGWDNISTLHDLLMSQVMF--- 514
Query: 877 RSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKE 936
S Q VF + P GV KI+I+TNIAETSITIDDVVYVID GK+KE
Sbjct: 515 --------------KSVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKE 560
Query: 937 KRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQR 996
+D + ++ +VS+ANA QRKGRAGRV G C+HL+ + L QLPEI R
Sbjct: 561 THFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRAS-LLDDYQLPEILR 619
Query: 997 VPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLG 1056
PLE+LCL+IKIL + + SRL++PP +++ S L +L AL E LTPLG
Sbjct: 620 TPLEELCLQIKILRL---GGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLG 676
Query: 1057 YHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFA- 1115
HLA LPV+ IGK++LFG++F CLDP LTIAASL+FK PFV P K++ A+ ++ E A
Sbjct: 677 VHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAK 736
Query: 1116 FANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGF 1175
SD+L ++ A++GW+ + + G R +YC + FLS LQ + ++K QF E L GF
Sbjct: 737 DTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGF 796
Query: 1176 AREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKF 1235
+ E+N N++N K+I A++CA LYP V +++ GK
Sbjct: 797 VSS-----------------RNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKK 839
Query: 1236 QKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1295
+K +K TK DG V +HP SVN + F +L+YH K++TS +++
Sbjct: 840 RKM-------------VKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLY 886
Query: 1296 DCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCELDQLL 1355
DC+ VS Y L LF GG +++Q + +++D+ WI F + + ++A LVKELR ELD LL
Sbjct: 887 DCTEVSPYCL-LFFGGDISIQKDNDQETIAVDE-WIVFQSPA-RIAHLVKELRKELDILL 943
Query: 1356 QDKIKNP-SIDL-CTCPRGSRIISTIVKLVTTQ 1386
Q+KI++P +D T R ++S I+ L+ TQ
Sbjct: 944 QEKIESPHPVDWNDTKSRDCAVLSAIIDLIKTQ 976
Score = 45.8 bits (107), Expect = 3e-04
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 21/130 (16%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDGDDFCIFSESR 71
G+ GG SS GG GG G GGGGGGGGGG R
Sbjct: 10 GRDGGPRSSGGGYGGGPAGGHGGNRGSGGGGGGGGGGRG-----------------GRGR 52
Query: 72 RPSRPSNSNISKGESRPKWKPKAKVPLQ---TLHMTSENQEKVKALLRDLQEQDADAGSE 128
P I ++ + + + Q +HM +E++ LL +Q ++ D SE
Sbjct: 53 HPGHLKGREIGMWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKN-DKESE 111
Query: 129 RGLSGEEEDD 138
+S +D
Sbjct: 112 AQISWFAPED 121
>gi|67782362 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo sapiens]
Length = 1369
Score = 576 bits (1484), Expect = e-164
Identities = 355/941 (37%), Positives = 549/941 (58%), Gaps = 73/941 (7%)
Query: 459 PNNSFVSNQIPEVEKASESEESDEDDGPAPVIVENESYVNLKKKISKRYDWQAKSVHAEN 518
P + F++ + ++++ + ++ ++ ES+ NL D+ A S+ + N
Sbjct: 487 PRDLFIAKLLNKLKQQQQQQQQHSENKRENSEDPEESWENLVSD----EDFSALSLESAN 542
Query: 519 GK----ICKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKT 574
+ + FR Q++ ++Q +L+ERQ LP ++ R++I+ L++H+VVV++G TG GK+
Sbjct: 543 VEDLEPVRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKS 602
Query: 575 TQIPQFILDDSL-NGPPEKVANIICTQPRRISAISVAERVAKERAERVG-----LTVGYQ 628
TQ+P F+L+D L N NI+CTQPRRISA+S+A RV E G GYQ
Sbjct: 603 TQVPHFLLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQ 662
Query: 629 IRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIV 688
IR+ES +TRLLYCTTGVLLR+L+ D L VSH+IVDEVHER+ +SDFLL++LK+I+
Sbjct: 663 IRMESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEIL 722
Query: 689 SQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSP 748
+R L +ILMSAT+++E FS YF CP++ I GR++PV+ F LED I T +VL+ S
Sbjct: 723 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSE 782
Query: 749 YMRSMKQISKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYK 808
Y + + EE E + ++ ++ +P Q L Y+
Sbjct: 783 YCQKFLE---------------EEEEVTINVTSKAGGIKKYQEYIPVQTGAHADLNPFYQ 827
Query: 809 GVSKSVIKTMSIMDFEKVNLELIEALLEWI-VDGKHSYPPGAILVFLPGLAEIKMLYEQL 867
S + M+ K+NL+LI LL ++ + GA+L+FLPGLA I+ LY+ L
Sbjct: 828 KYSSRTQHAILYMNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLL 887
Query: 868 QSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVY 927
++ F S R + LHS LS+++Q A F PP GV KI+++TNIAET ITI DVV+
Sbjct: 888 SNDRRF---YSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVF 944
Query: 928 VIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLL 987
VID+G+ KE +Y S M SL +TFVS+A+ALQR+GRAGRV G CF ++T + +
Sbjct: 945 VIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFM 1003
Query: 988 KQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALT 1047
+PEI RVPLE+LCL I + S + S+ ++PP + + LR +GA
Sbjct: 1004 DYSVPEILRVPLEELCLHIMKCNLGSP---EDFLSKALDPPQLQVISNAMNLLRKIGACE 1060
Query: 1048 PDE-RLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEE 1106
+E +LTPLG HLA+LPV+V+IGK+++FG+IF CLDP T+AA + KSPF +P +K+E
Sbjct: 1061 LNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDE 1120
Query: 1107 ANQKKLEFAFANSDYLALLQAYKGWQLSTKE-GVRASYNYCRQNFLSGRVLQEMASLKRQ 1165
A+ K A A+SD+L + AY GW+ + +E G R+ YCR+NFL+ L + +K++
Sbjct: 1121 ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQE 1180
Query: 1166 FTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNV 1225
+L+ GF+ RA + + L+ A+L A LY NV
Sbjct: 1181 LIKLVKAAGFSSSTTSTSWEGNRA------------SQTLSFQEIALLKAVLVAGLYDNV 1228
Query: 1226 VQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHE 1285
++ T +V + K A + V G +HPSSVN ++ +LLY E
Sbjct: 1229 GKI---------IYTKSVDVTEKLACI--VETAQGKAQVHPSSVNRDLQ--THGWLLYQE 1275
Query: 1286 KIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVK 1345
KI+ +RV++R+ ++++ +P++LFGG ++++Q E ++S+ DGWI F A ++A + K
Sbjct: 1276 KIRYARVYLRETTLITPFPVLLFGG---DIEVQHRERLLSI-DGWIYF-QAPVKIAVIFK 1330
Query: 1346 ELRCELDQLLQDKIKNPSIDLCTCPRGSRIISTIVKLVTTQ 1386
+LR +D +L+ K++NP + L +I+ I +L+ T+
Sbjct: 1331 QLRVLIDSVLRKKLENPKMSL----ENDKILQIITELIKTE 1367
>gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapiens]
Length = 1270
Score = 460 bits (1183), Expect = e-129
Identities = 308/862 (35%), Positives = 454/862 (52%), Gaps = 110/862 (12%)
Query: 529 QASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNG 588
+ Q+ILQER+ LP + IL + ++ VV+I G TGCGKTTQ+PQFILDD +
Sbjct: 373 EQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQN 432
Query: 589 PPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSA-TRLLYCTTG 647
NI+ TQPRRISA+SVAERVA ER E G + GY +R ES+ +++CT G
Sbjct: 433 DRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVG 492
Query: 648 VLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAEL 707
VLLR+LE ++G+SH+IVDE+HER +DFLL+VL+D+V P ++++LMSAT++ +
Sbjct: 493 VLLRKLEA--GIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSM 550
Query: 708 FSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNR 767
F +YF +CP+I + GRT+PV ++FLED I +T +V K+K K ++
Sbjct: 551 FCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPP------------KDKKKKDKDD 598
Query: 768 TAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVN 827
E+ +D +L D+ P+ +L QL + ++
Sbjct: 599 DGGED--DDANCNLICGDEYG-----PETRLSMSQL------------------NEKETP 633
Query: 828 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLH 887
ELIEALL++I + PGA+LVFLPG I + + L+ N F S+R I PLH
Sbjct: 634 FELIEALLKYI---ETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFG---SHRYQILPLH 687
Query: 888 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 947
S + EEQ+ VF P GVTK+I+STNIAETSITI+DVVYVIDS K K K + A M +
Sbjct: 688 SQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTN 747
Query: 948 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK 1007
+ S+ N QRKGRAGRV G CFHL + + +L PE+ R PL ++ L IK
Sbjct: 748 YATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-ERLETHMTPEMFRTPLHEIALSIK 806
Query: 1008 ILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 1067
+L + + ++ IEPP D++ ++ LR+L AL ++ LTPLG LA LP++ R
Sbjct: 807 LLRL---GGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPR 863
Query: 1068 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN------SDY 1121
GK+M+ G IF D TIAA+ F PF++ K+L + N SD+
Sbjct: 864 FGKMMIMGCIFYVGDAICTIAAATCFPEPFIN--------EGKRLGYIHRNFAGNRFSDH 915
Query: 1122 LALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLR 1181
+ALL ++ W + G A +C L+ L+ K Q E+L + GF + L
Sbjct: 916 VALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLL 975
Query: 1182 AREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTG 1241
+ V TG + N + ++ ++L +YPNV K
Sbjct: 976 TQ-----------VFTNTGPDNNLD-----VVISLLAFGVYPNVCYHKE----------- 1008
Query: 1242 AVRMQPKSAELKFVTKNDGYVHIHPSSVN----YQVRHFDSPYLLYHEKIKTSRVFIRDC 1297
+ K +T IH SSVN Q + SP+ ++ EKI+T + +
Sbjct: 1009 ---------KRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGM 1059
Query: 1298 SMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQD 1357
++V+ L+LF +V Q + L D WI+ + SH+ A + LR ++ L+ +
Sbjct: 1060 TLVTPLQLLLFASKKVQSDGQ-----IVLVDDWIK-LQISHEAAACITGLRAAMEALVVE 1113
Query: 1358 KIKNPSIDLCTCPRGSRIISTI 1379
K P+I P R+++ I
Sbjct: 1114 VTKQPAIISQLDPVNERMLNMI 1135
Score = 33.5 bits (75), Expect = 1.5
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 2 SSSVRRKGKPGKGGG-KGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKA 53
++S R G GGG +G SRGG G S SGG G GG GG R A
Sbjct: 1203 ANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPSGGYRGSGGFQRGGGRGA 1255
Score = 33.1 bits (74), Expect = 1.9
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGG-------GGGGGGGGNRKASSR 56
G + GG S GG GG ++S +GSGG GG G G G GG + SR
Sbjct: 1170 GSGYRRGGSSYSGGGYGG-GYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSR 1223
Score = 32.3 bits (72), Expect = 3.2
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 3 SSVRRKGKPGKGGGKG---SSRG-GRGGRSHASKSHGSGGGGGGGGGGGGGNR 51
S RR G GGG G SS G G GG ++ S +G G G GGG G +R
Sbjct: 1171 SGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSR 1223
>gi|166851804 tudor domain containing 9 [Homo sapiens]
Length = 1382
Score = 313 bits (801), Expect = 1e-84
Identities = 209/652 (32%), Positives = 349/652 (53%), Gaps = 92/652 (14%)
Query: 544 LPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRR 603
LP +E +++L+ + VV+I G TG GK+TQ+PQ+ILD + +I+ TQPR+
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQR--SAYCSIVVTQPRK 189
Query: 604 ISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVS 663
I A S+A ++KERA +G VGYQ+ LE + + TRL+Y TTGVLL+++ +L +
Sbjct: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 249
Query: 664 HIIVDEVHERTEESDFLLLVLKDIVSQRPG-LQVILMSATLNAELFSDYF--------NS 714
HII+DEVHERTEE DFLLLV++ ++ ++V+LMSAT++ + F+DYF N
Sbjct: 250 HIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNP 309
Query: 715 CPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVE 774
+ + G+ V+++ Y+ ++ I KL
Sbjct: 310 AYIFEVEGKPHSVEEY------------------YLNDLEHIHHSKL------------- 338
Query: 775 EDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEAL 834
S HL ++ + + + V+ S+I+ +D ++ +
Sbjct: 339 -----SPHLLEEPVITKDIYE--------------VAVSLIQMFDDLDMKESGNKAWSGA 379
Query: 835 LEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEE 894
+++++ ++LVFLPGL EI ++E L SL + R ++PLHSS++ EE
Sbjct: 380 -QFVLERS------SVLVFLPGLGEINYMHELL--TSLVHKRLQ----VYPLHSSVALEE 426
Query: 895 QQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVS 954
Q VF+ P G KII+STNIAE+S+T+ DV YVID + D +SL ++ S
Sbjct: 427 QNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWAS 486
Query: 955 QANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSA 1014
+ + QRKGRAGRV+ G C+ L +++ + +PE+ R PL L++K+L+M
Sbjct: 487 KTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEP 546
Query: 1015 HNLQSVFSRLIEPPHTDSLRASKIRLRDLGALT----------PDERLTPLGYHLASLPV 1064
+++ + + PP + + + L+++GAL D LT LG LA LPV
Sbjct: 547 ---RALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPV 603
Query: 1065 DVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFA-FANSDYLA 1123
+ ++GKL++ G +F CLD L IAA+L+ K+ F P+ + + + K+ F+ + SD +A
Sbjct: 604 NQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIA 663
Query: 1124 LLQAYKGWQLSTKEG----VRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1171
L++A+K W+ + G + N+ R N++ + ++E+A L + +S
Sbjct: 664 LVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRIS 715
>gi|38505213 YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 281 bits (718), Expect = 4e-75
Identities = 186/502 (37%), Positives = 284/502 (56%), Gaps = 49/502 (9%)
Query: 822 DFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRR---- 877
D EKV+L+LI LL I HS GA+L+FLPG EI L +++ LF+++R
Sbjct: 600 DDEKVDLDLIMHLLYNIC---HSCDAGAVLIFLPGYDEIVGLRDRI----LFDDKRFADN 652
Query: 878 SNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEK 937
++R + LHS++ + +Q+ V PPAGV KII+STNIAETSIT++DVV+VIDSGK+KEK
Sbjct: 653 THRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK 712
Query: 938 RYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRV 997
+DA + L+ ++S+A+A+QRKGRAGR G+CF LF+ + + +L+ Q PE+ R+
Sbjct: 713 SFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRM 771
Query: 998 PLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGY 1057
PL++LCL K+L + + + EPP +R + L+ + A+ E LT LGY
Sbjct: 772 PLQELCLHTKLLAPVNC-PIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGY 830
Query: 1058 HLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF--- 1114
HLA LPV+ +GK++L + +CLDP LTIA +LA++ PFV P +A+QK+
Sbjct: 831 HLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP----TQASQKRAAMLCR 886
Query: 1115 ----AFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELL 1170
A A SD++ALL+A++ WQ + +G + +C +NFLS ++ + ++ Q L
Sbjct: 887 KRFTAGAFSDHMALLRAFQAWQKARSDGWERA--FCEKNFLSQATMEIIIGMRTQLLGQL 944
Query: 1171 SDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKS 1230
GF RA+GG + D N+N+EN ++ A L A +YPN+V V
Sbjct: 945 RASGFV-----------RARGGGDIRD-----VNTNSENWAVVKAALVAGMYPNLVHVDR 988
Query: 1231 PEGKFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVN-YQVRHFDSPYLLYHEKIKT 1289
VR P S V Y I P++ ++ + +L+Y E +
Sbjct: 989 ENLVLTGPKEKKVRFHPAS-----VLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRA 1043
Query: 1290 SRVF-IRDCSMVSVYPLVLFGG 1310
R+ IR CS V+ +++F G
Sbjct: 1044 HRIANIRCCSAVTPVTILVFCG 1065
Score = 225 bits (573), Expect = 3e-58
Identities = 133/295 (45%), Positives = 182/295 (61%), Gaps = 22/295 (7%)
Query: 513 SVHAENGKICK----------QFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQV 562
+V AEN ++ K Q +K+ +F S RQSLP +E++E I+ ++++++V
Sbjct: 155 AVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSF---RQSLPVFEKQEEIVKIIKENKV 211
Query: 563 VVISGMTGCGKTTQIPQFILDDSL-NGPPEKVANIICTQPRRISAISVAERVAKERAERV 621
V+I G TG GKTTQIPQF+LDD NG P I CTQPRR++AI+VAERVA ER ER+
Sbjct: 212 VLIVGETGSGKTTQIPQFLLDDCFKNGIP---CRIFCTQPRRLAAIAVAERVAAERRERI 268
Query: 622 GLTVGYQIRLESVKSSATRLLYCTTGVLLRRL-EGDTALQGVSHIIVDEVHERTEESDFL 680
G T+GYQIRLES S T L +CT GVLLR L GD+ L V+H+IVDEVHER SDFL
Sbjct: 269 GQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFL 328
Query: 681 LLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 740
L L+D++ + P L++IL SA L+ LF YF SCPVI I GR F V + FLED + T
Sbjct: 329 LTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTG 388
Query: 741 YVLQDGSPYMRSMKQISKEKLKARR----NRTAFEEVEEDLRLSLHLQDQDSVKD 791
Y ++ Y + +Q K++ +F+ + R L++ D+ + D
Sbjct: 389 YTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLNVTDEYDLLD 443
>gi|20336290 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 [Homo
sapiens]
Length = 1155
Score = 256 bits (653), Expect = 1e-67
Identities = 169/518 (32%), Positives = 278/518 (53%), Gaps = 33/518 (6%)
Query: 847 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 906
PG IL FLPG EIK + ++LQ ++ +I P+HS++ +Q+A+F +PP GV
Sbjct: 629 PGGILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPVHSNIPMMDQKAIFQQPPVGV 685
Query: 907 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 966
KI+++TNIAETSITI+D+V+V+DSG KE+RYD + LE +VS+AN +QR+GRAG
Sbjct: 686 RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAG 745
Query: 967 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIE 1026
R SG +HLF +++ Q+PEI R PLE L L+ KI S+ ++
Sbjct: 746 RCQSGFAYHLFPRSRL-EKMVPFQVPEILRTPLENLVLQAKI--HMPEKTAVEFLSKAVD 802
Query: 1027 PPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 1086
P+ ++ + I L+++G L E LT LG LA + D R+ K ++ +IFRCL P L
Sbjct: 803 SPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLV 862
Query: 1087 IAASLAFKSPFVSPWDKKEEANQKKLEFAF-ANSDYLALLQAYKGWQLSTKEGVRAS-YN 1144
+ + L + PF S + E ++ K + + SD+LA ++A GW+ + R+S N
Sbjct: 863 VVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSREN 921
Query: 1145 YCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEAN 1204
Y +N L L+ + L +QF+E + E G + N
Sbjct: 922 YLEENLLYAPSLRFIHGLIKQFSENI--------------YEAFLVGKPSDCTLASAQCN 967
Query: 1205 SNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDGYVHI 1264
+E +L+ +L A LYPN++QV+ +GK + + +P S + + TK+ G + +
Sbjct: 968 EYSEEEELVKGVLMAGLYPNLIQVR--QGKVTRQG----KFKPNS--VTYRTKS-GNILL 1018
Query: 1265 HPSSVNYQVRHFDSPYLLYHEKIKTS-RVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFV 1323
H S++N + S +L Y +K++ VF+RD S V ++L G V+++
Sbjct: 1019 HKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRAT 1078
Query: 1324 VSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKN 1361
+SL D + + + L+KELR L ++++ +++
Sbjct: 1079 ISLSDSDLLRLEGDSRTVRLLKELRRALGRMVERSLRS 1116
Score = 199 bits (506), Expect = 2e-50
Identities = 103/202 (50%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Query: 537 ILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANI 596
+ QE LP R+TILN + +H VVVISG TGCGKTT+IPQ +L+ + N+
Sbjct: 388 VWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 447
Query: 597 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEG 655
I TQPRRISA+SVA+RV+ E + VG+Q+RLES S LL+CT G+LLR+L+
Sbjct: 448 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQS 507
Query: 656 DTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSC 715
+ +L+GVSH+IVDEVHER +DFLL++LK + P L+++LMSAT + E FS YF C
Sbjct: 508 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGC 567
Query: 716 PVITIPGRTFPVDQFFLEDAIA 737
PVI +PG +PV + +LED +A
Sbjct: 568 PVIKVPGFMYPVKEHYLEDILA 589
>gi|20336294 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 [Homo
sapiens]
Length = 1194
Score = 256 bits (653), Expect = 1e-67
Identities = 169/518 (32%), Positives = 278/518 (53%), Gaps = 33/518 (6%)
Query: 847 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 906
PG IL FLPG EIK + ++LQ ++ +I P+HS++ +Q+A+F +PP GV
Sbjct: 668 PGGILCFLPGWQEIKGVQQRLQEAL---GMHESKYLILPVHSNIPMMDQKAIFQQPPVGV 724
Query: 907 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 966
KI+++TNIAETSITI+D+V+V+DSG KE+RYD + LE +VS+AN +QR+GRAG
Sbjct: 725 RKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAG 784
Query: 967 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIE 1026
R SG +HLF +++ Q+PEI R PLE L L+ KI S+ ++
Sbjct: 785 RCQSGFAYHLFPRSRL-EKMVPFQVPEILRTPLENLVLQAKI--HMPEKTAVEFLSKAVD 841
Query: 1027 PPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 1086
P+ ++ + I L+++G L E LT LG LA + D R+ K ++ +IFRCL P L
Sbjct: 842 SPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLV 901
Query: 1087 IAASLAFKSPFVSPWDKKEEANQKKLEFAF-ANSDYLALLQAYKGWQLSTKEGVRAS-YN 1144
+ + L + PF S + E ++ K + + SD+LA ++A GW+ + R+S N
Sbjct: 902 VVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSREN 960
Query: 1145 YCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEAN 1204
Y +N L L+ + L +QF+E + E G + N
Sbjct: 961 YLEENLLYAPSLRFIHGLIKQFSENI--------------YEAFLVGKPSDCTLASAQCN 1006
Query: 1205 SNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDGYVHI 1264
+E +L+ +L A LYPN++QV+ +GK + + +P S + + TK+ G + +
Sbjct: 1007 EYSEEEELVKGVLMAGLYPNLIQVR--QGKVTRQG----KFKPNS--VTYRTKS-GNILL 1057
Query: 1265 HPSSVNYQVRHFDSPYLLYHEKIKTS-RVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFV 1323
H S++N + S +L Y +K++ VF+RD S V ++L G V+++
Sbjct: 1058 HKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRAT 1117
Query: 1324 VSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKN 1361
+SL D + + + L+KELR L ++++ +++
Sbjct: 1118 ISLSDSDLLRLEGDSRTVRLLKELRRALGRMVERSLRS 1155
Score = 199 bits (506), Expect = 2e-50
Identities = 103/202 (50%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Query: 537 ILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANI 596
+ QE LP R+TILN + +H VVVISG TGCGKTT+IPQ +L+ + N+
Sbjct: 427 VWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNV 486
Query: 597 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLEG 655
I TQPRRISA+SVA+RV+ E + VG+Q+RLES S LL+CT G+LLR+L+
Sbjct: 487 IITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQS 546
Query: 656 DTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSC 715
+ +L+GVSH+IVDEVHER +DFLL++LK + P L+++LMSAT + E FS YF C
Sbjct: 547 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGC 606
Query: 716 PVITIPGRTFPVDQFFLEDAIA 737
PVI +PG +PV + +LED +A
Sbjct: 607 PVIKVPGFMYPVKEHYLEDILA 628
>gi|38158022 DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Homo sapiens]
Length = 1143
Score = 240 bits (613), Expect = 6e-63
Identities = 141/335 (42%), Positives = 191/335 (57%), Gaps = 13/335 (3%)
Query: 843 HSYPP---GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVF 899
H YPP G +LVFL G+AEI + E Q+ + + R V+ PLHS+LS +Q VF
Sbjct: 371 HKYPPEERGDLLVFLSGMAEISAVLEAAQTYA----SHTQRWVVLPLHSALSVADQDKVF 426
Query: 900 VKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANAL 959
P GV K I+STNIAETS+TID + +V+DSGK+KE YD ++ L++ ++SQA+A
Sbjct: 427 DVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAE 486
Query: 960 QRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQS 1019
QRKGRAGR GVCF L+ Y+ +PEI+RV L+ L L++K + +
Sbjct: 487 QRKGRAGRTGPGVCFRLYAESDYD-AFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFP- 544
Query: 1020 VFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFR 1079
IEPP SL + + LRD GAL E LTP+G LA LPVDV IGK+++ GS+F
Sbjct: 545 ----FIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFS 600
Query: 1080 CLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGV 1139
++P LTIAA+L+ +SPF E + D L + W E
Sbjct: 601 LVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERS 660
Query: 1140 RASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIG 1174
R S +CR+ + L EMA+L+RQF ELL D G
Sbjct: 661 RNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHG 695
Score = 188 bits (477), Expect = 4e-47
Identities = 100/234 (42%), Positives = 151/234 (64%), Gaps = 9/234 (3%)
Query: 525 FRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDD 584
F KQA + + +ER +LP + IL L++HQVVV++G TGCGK+TQ+PQ++L
Sbjct: 143 FGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA 202
Query: 585 SLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYC 644
+ ++ CTQPRRI+ IS+A+RV E + G VGYQIR ES +S+AT++++
Sbjct: 203 GFS-------HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFL 255
Query: 645 TTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLN 704
T G+LLR+++ + +L +IVDEVHER +DFLL VL+ ++ RP L+VILMSAT+N
Sbjct: 256 TVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATIN 315
Query: 705 AELFSDYFNSCPVITIPGRTFPVDQFF--LEDAIAVTRYVLQDGSPYMRSMKQI 756
LFS YF++ PV+ +PGR FP+ + E ++ D P++R ++ I
Sbjct: 316 ISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESI 369
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapiens]
Length = 1157
Score = 230 bits (586), Expect = 8e-60
Identities = 196/688 (28%), Positives = 318/688 (46%), Gaps = 85/688 (12%)
Query: 539 QERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIIC 598
+ER LP E + I+ + +H +V++ G TG GKTTQ+PQF+ + + +
Sbjct: 247 EERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIG---V 303
Query: 599 TQPRRISAISVAERVAKER--AERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 656
T+PRR++A+++++RVAKE ++RV V YQIR E + TR+ + T GVLL+ ++ D
Sbjct: 304 TEPRRVAAVAMSQRVAKEMNLSQRV---VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKD 360
Query: 657 TALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPG----LQVILMSATLNAELFSD-- 710
L +I+DE HER+ +D L+ +L IV+ R L++++MSATL E F+
Sbjct: 361 FLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNP 420
Query: 711 --YFNSCPVITIPGRTFPVDQFF-----LED-------AIAVTRYVLQDGSPYMRSMKQI 756
+ PVI + R FPV F LED + +L G + Q
Sbjct: 421 RLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQA 480
Query: 757 SKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIK 816
L RR R AF + + D KD+V + + FK+ AR K V+
Sbjct: 481 EVHAL-CRRLRKAFPPSRARPQ-----EKDDDQKDSVEEMR-KFKKSRARAKKARAEVLP 533
Query: 817 TMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNR 876
+++ + + + E VD + G + + + +
Sbjct: 534 QINLDHYSVLPAGEGDEDREAEVDEEE------------GALDSDLDLDLGDGGQDGGEQ 581
Query: 877 RSNRCVIH--PLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKM 934
+H PL+S L+ E+Q VF PP G +++TN+AETS+TI + YV+D GK+
Sbjct: 582 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 641
Query: 935 KEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEI 994
K++ YD G+ S T+VSQA+A QR GRAGR G C+ L++S + + PEI
Sbjct: 642 KKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFG-DFEQFPPPEI 700
Query: 995 QRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDER--- 1051
R P+E L L++K L + N PP ++L A++ L LGAL P ++
Sbjct: 701 TRRPVEDLILQMKALNVEKVINFP-----FPTPPSVEALLAAEELLIALGALQPPQKAER 755
Query: 1052 ------------LTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVS 1099
+T LG +A+ PV R K++ CL A+TI AS+ + F
Sbjct: 756 VKQLQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-E 814
Query: 1100 PWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEG--------------VRASYNY 1145
D+ ++++ + + + + G S K G + +
Sbjct: 815 ELDRPAASDEELTRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQF 874
Query: 1146 CRQNFLSGRVLQEMASLKRQFTELLSDI 1173
C N L + + E+ L+ Q T ++ +
Sbjct: 875 CEANGLRYKAMMEIRRLRGQLTTAVNAV 902
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 196 bits (497), Expect = 2e-49
Identities = 123/346 (35%), Positives = 187/346 (54%), Gaps = 11/346 (3%)
Query: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
+ +EA + ++ + PPG ILVFL G EI+ E LQ + ++ P+++
Sbjct: 590 DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDPCRRLGSKIRELLVLPIYA 649
Query: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
+L S+ Q +F P G K++++TNIAETS TI+ ++YV+D G K+K Y+ GMESL
Sbjct: 650 NLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIYVLDPGFCKQKSYNPRTGMESL 709
Query: 949 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1008
T S+A+A QR GRAGRVA+G CF L+T+ Y H+L + +PEIQR L + L +K
Sbjct: 710 TVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKS 769
Query: 1009 LEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRI 1068
L H+L + ++PP ++L + +L LGAL LT G +A LPVD +
Sbjct: 770 L---GIHDL--MHFDFLDPPPYETLLLTLEQLYALGALNHLGELTTSGRKMAELPVDPML 824
Query: 1069 GKLMLFGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFANSDYLALLQA 1127
K++L + C + LT+AA L+ S F P DK A+ ++ F D+L LL
Sbjct: 825 SKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNV 884
Query: 1128 YKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
Y W S S +C +NF+ R ++ ++ Q LL +
Sbjct: 885 YTQWAES-----GYSSQWCCENFVQFRSMRRARDVREQLEGLLERV 925
Score = 172 bits (437), Expect = 2e-42
Identities = 91/201 (45%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 531 SRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPP 590
++Q +SI R+SLP + RE +L + HQV++I G TG GKTTQIPQ++ ++
Sbjct: 386 AQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKG 445
Query: 591 EKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLL 650
K+A CTQPRR++A+SVA RVA+E ++G VGY IR E S T L Y T G+LL
Sbjct: 446 MKIA---CTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLL 502
Query: 651 RRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSD 710
R + L S ++VDE HERT +D L ++KD+ RP L+V++ SAT++ FS
Sbjct: 503 REFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFST 562
Query: 711 YFNSCPVITIPGRTFPVDQFF 731
+F+ PV IPGR FPVD F+
Sbjct: 563 FFDDAPVFRIPGRRFPVDIFY 583
>gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens]
Length = 1220
Score = 196 bits (497), Expect = 2e-49
Identities = 140/495 (28%), Positives = 242/495 (48%), Gaps = 66/495 (13%)
Query: 818 MSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEI----KMLYEQLQSNSLF 873
+ I+ ++ + ++A L ++ + PPG ILVFL G EI ++LYE+++S
Sbjct: 744 VEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLG-- 801
Query: 874 NNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGK 933
+I P++S+L SE Q +F P G K++I+TNIAETS+TID + YV+D G
Sbjct: 802 --PDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 859
Query: 934 MKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPE 993
+K+K Y++ G++ L T +SQA A QR GRAGR G C+ L+T Y ++L +PE
Sbjct: 860 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 919
Query: 994 IQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLT 1053
IQR L L +K + ++L S ++ P ++L + +L LGAL + LT
Sbjct: 920 IQRTNLASTVLSLKAM---GINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLT 974
Query: 1054 PLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLE 1113
LG +A P++ + K+++ C + LTI + L+ ++ F P DK+ A+QKK +
Sbjct: 975 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1034
Query: 1114 FAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
F D+L LL Y W+ + + S +C +NF+ R L+ +++Q
Sbjct: 1035 FHQTEGDHLTLLAVYNSWKNN-----KFSNPWCYENFIQARSLRRAQDIRKQML------ 1083
Query: 1174 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1233
G++D + S ++ + +C+ + N + K P+
Sbjct: 1084 --------------------GIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAK-KDPQE 1122
Query: 1234 KFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVF 1293
++ V V+IHPSS + + +++YHE + T++ +
Sbjct: 1123 GYRTLIDQQV------------------VYIHPSSALF---NRQPEWVVYHELVLTTKEY 1161
Query: 1294 IRDCSMVSVYPLVLF 1308
+R+ + + LV F
Sbjct: 1162 MREVTTIDPRWLVEF 1176
Score = 151 bits (382), Expect = 4e-36
Identities = 82/199 (41%), Positives = 125/199 (62%), Gaps = 4/199 (2%)
Query: 536 SILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVAN 595
SIL++R+SLP ++ +E ++ + +Q++++ G TG GKTTQI Q++ +
Sbjct: 557 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR----GK 612
Query: 596 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 655
I CTQPRR++A+SVA+RV++E +G VGY IR E S T + Y T G+LLR
Sbjct: 613 IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI 672
Query: 656 DTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSC 715
D L + I++DE HERT +D L +LK V +R +++I+ SATL+A FS YF
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEA 732
Query: 716 PVITIPGRTFPVDQFFLED 734
P+ TIPGRT+PV+ + ++
Sbjct: 733 PIFTIPGRTYPVEILYTKE 751
>gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapiens]
Length = 1227
Score = 186 bits (472), Expect = 1e-46
Identities = 128/468 (27%), Positives = 232/468 (49%), Gaps = 59/468 (12%)
Query: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
+ +EA ++ + S PG IL+F+PG +I++ +Q+ + L + + P++S
Sbjct: 722 DYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEH-LEELENAPALAVLPIYS 780
Query: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
L S+ Q +F K P GV K I++TNIAETS+T+D +++VIDSG K K ++ GM++L
Sbjct: 781 QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL 840
Query: 949 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1008
+ +SQANA QR GRAGR G CF L+T Y ++LL +PEIQR L + L +K
Sbjct: 841 QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS 900
Query: 1009 LEMFSAHNLQSVFS-RLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 1067
L +Q + ++PP D++ S +L LGAL LT G + P+D
Sbjct: 901 L------GVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPA 954
Query: 1068 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQA 1127
+ K+++ C L I + L+ + F P ++EE++Q + +FA SD+L L
Sbjct: 955 LSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNV 1014
Query: 1128 YKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEK 1187
Y W+ + + +C +F+ + ++++ ++ Q +++ +++
Sbjct: 1015 YLQWKNNNYSTI-----WCNDHFIHAKAMRKVREVRAQLKDIM--------------VQQ 1055
Query: 1188 RAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQP 1247
R L + G + + ++ +CAA + ++K G++ TG
Sbjct: 1056 RMS-----LASCGTDWD-------IVRKCICAAYFHQAAKLKG-IGEYVNIRTGMP---- 1098
Query: 1248 KSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1295
H+HP+S + + + Y++YHE + T++ +++
Sbjct: 1099 --------------CHLHPTSSLFGM-GYTPDYIVYHELVMTTKEYMQ 1131
Score = 162 bits (411), Expect = 2e-39
Identities = 90/229 (39%), Positives = 143/229 (62%), Gaps = 12/229 (5%)
Query: 506 RYDWQAKSVHAENGKICKQFRMKQASRQF---QSILQERQSLPAWEERETILNLLRKHQV 562
+ D++ + A++ K R +AS +F +SIL++RQ LP + ++ +L ++R + +
Sbjct: 496 KVDYRTEQKFADHMK-----RKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSI 550
Query: 563 VVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVG 622
V++ G TG GKTTQ+ Q++ +D I CTQPRR++A+SVA+RV++E +G
Sbjct: 551 VIVVGETGSGKTTQLTQYLHEDGYTD----YGMIGCTQPRRVAAMSVAKRVSEEMGGNLG 606
Query: 623 LTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLL 682
VGY IR E S T + Y T G+LLR + L S II+DE HER+ +D L
Sbjct: 607 EEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFG 666
Query: 683 VLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFF 731
+L+++V++R L++I+ SAT++AE F+ +F + P+ IPGRTFPVD F
Sbjct: 667 LLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILF 715
>gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo
sapiens]
Length = 795
Score = 182 bits (461), Expect = 3e-45
Identities = 99/201 (49%), Positives = 134/201 (66%), Gaps = 5/201 (2%)
Query: 533 QFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILD--DSLNGPP 590
++ IL++R LP WE ++ ++L +HQ V+ G TG GKTTQIPQ+ ++ SL GP
Sbjct: 126 RYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPK 185
Query: 591 EKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLL 650
VA CTQPRR++A+SVA+RVA E +G VGY IR E S+ T L Y T G+LL
Sbjct: 186 RGVA---CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLL 242
Query: 651 RRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSD 710
R D L+ II+DE HERT +D L+ VLK++V QR L+VI+MSATL+A F
Sbjct: 243 REAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQI 302
Query: 711 YFNSCPVITIPGRTFPVDQFF 731
YF++CP++TIPGRT PV+ F+
Sbjct: 303 YFDNCPLLTIPGRTHPVEIFY 323
Score = 169 bits (429), Expect = 1e-41
Identities = 110/336 (32%), Positives = 175/336 (52%), Gaps = 16/336 (4%)
Query: 848 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPP---- 903
G +L+FL G EI ++++ I PL+S+L ++QQ +F PP
Sbjct: 350 GDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ 409
Query: 904 --AGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQR 961
A K+++STNIAETS+TID VV+VID G K+K Y+ +ESL T +S+A+A QR
Sbjct: 410 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 469
Query: 962 KGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVF 1021
GRAGR G CF L+T Y ++ PEI R L + L++K L + V
Sbjct: 470 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDL-----VH 524
Query: 1022 SRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCL 1081
++PP ++L + L L AL D LT LG +A P+D ++ K+++ + C
Sbjct: 525 FDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCS 584
Query: 1082 DPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRA 1141
+ L+I A L+ FV P + K+ A++ K+ FA + D+L LL Y ++ +
Sbjct: 585 NEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQN-----HE 639
Query: 1142 SYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAR 1177
S +C NF++ R L ++++Q + ++ R
Sbjct: 640 SVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPR 675
>gi|20544129 DEAH (Asp-Glu-Ala-His) box polypeptide 35 [Homo sapiens]
Length = 703
Score = 180 bits (457), Expect = 7e-45
Identities = 135/475 (28%), Positives = 231/475 (48%), Gaps = 61/475 (12%)
Query: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL--QSNSLFNNRRSNRCVIHPL 886
+ I++ +E +V + G +L FL G E++ + L Q+ +L + P+
Sbjct: 256 DYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPM 315
Query: 887 HSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGME 946
++ L S EQ VF + V K+I++TN+AETSITI +VYVID G +K + Y+ +E
Sbjct: 316 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIE 375
Query: 947 SLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRI 1006
L VSQA+A QR GR GR SG C+ L+T ++ +L + +PE+QR L + L++
Sbjct: 376 CLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFD-KLPQSTVPEMQRSNLAPVILQL 434
Query: 1007 KILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLT-PLGYHLASLPVD 1065
K L + + + PP S+ + L LG L D RLT PLG +A P++
Sbjct: 435 KALGIDNVLRF-----HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLN 489
Query: 1066 VRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALL 1125
K++L F C L+IAA + ++ FV P ++K A + +FA D+L +L
Sbjct: 490 PMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTML 549
Query: 1126 QAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREI 1185
Y+ + K+ +C+++FL+ + L A+++ Q +LL ++
Sbjct: 550 NIYEAFIKHNKDS-----KWCQEHFLNYKGLVRAATVREQLKKLLVKF----------QV 594
Query: 1186 EKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRM 1245
+++ GD P L+ + + + N + STGA R
Sbjct: 595 PRKSSEGD----------------PDLVLRCIVSGFFANAARFH---------STGAYR- 628
Query: 1246 QPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1300
++D +HIHP+SV Y + +++Y+E I+TS+ ++RD + +
Sbjct: 629 ---------TIRDDHELHIHPASVLYAEK--PPRWVIYNEVIQTSKYYMRDVTAI 672
Score = 155 bits (393), Expect = 2e-37
Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 14/212 (6%)
Query: 536 SILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVAN 595
SI Q+RQ LP ++ R IL L+ +Q VVI G TGCGK+TQIPQ++ + V
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG- 104
Query: 596 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSS-ATRLLYCTTGVLLRRLE 654
TQPRR++A++VA RVA+ER +G VGY IR + ATR+ + T G+L+R +
Sbjct: 105 --VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMM 162
Query: 655 GDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFN- 713
D L S I++DE HERT +D + +LK I +R L++I+ SATL+A+ F D+FN
Sbjct: 163 VDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 714 ---------SCPVITIPGRTFPVDQFFLEDAI 736
+C ++T+ GRTFPVD F+L+ +
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQSPV 254
>gi|20336302 DEAH (Asp-Glu-Ala-His) box polypeptide 33 [Homo sapiens]
Length = 707
Score = 165 bits (417), Expect = 3e-40
Identities = 129/454 (28%), Positives = 221/454 (48%), Gaps = 62/454 (13%)
Query: 850 ILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI 909
ILVFL G EI+ + + + + ++ PL++SL +Q VF P G K+
Sbjct: 291 ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKV 350
Query: 910 IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVA 969
IISTNIAETSITI + YV+D+G +K K+Y+ G+E L VS+ A QR GRAGR
Sbjct: 351 IISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRED 410
Query: 970 SGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPH 1029
SG+C+ L+T + + K +PEIQR L + L++ +++ + + P
Sbjct: 411 SGICYRLYTEDEF-EKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFD-----FMSKPS 464
Query: 1030 TDSLRASKIRLRDLGALTPDE---RLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 1086
D ++A+ +L LGAL + LTP+G +A+ P++ + K +L F C + LT
Sbjct: 465 PDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILT 524
Query: 1087 IAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYC 1146
I + L+ S +P ++EE + +F + D++ LL Y+ T + + + ++C
Sbjct: 525 IVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYR-----TFKNLGGNKDWC 579
Query: 1147 RQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSN 1206
++NF++ + + +A E RAQ D L + A+S
Sbjct: 580 KENFVNSKNMTLVA-------------------------EVRAQLRDICLKMSMPIASSR 614
Query: 1207 AENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHP 1266
+ + + L +L+ + +++ P+G + T T QP V IHP
Sbjct: 615 GD-VESVRRCLAHSLFMSTAELQ-PDGTYATTDT----HQP--------------VAIHP 654
Query: 1267 SSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1300
SSV + H ++Y E + T++ ++RD ++
Sbjct: 655 SSVLF---HCKPACVVYTELLYTNKCYMRDLCVI 685
Score = 145 bits (367), Expect = 2e-34
Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 9/207 (4%)
Query: 530 ASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGP 589
AS +++ +R+SLP ++ R +L LR V+ G TG GKTTQIPQ++ + ++
Sbjct: 60 ASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGIS-- 117
Query: 590 PEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVL 649
+ I TQPRR++AIS+A RV+ E+ +G VGY +R + V S TR+ + T G+L
Sbjct: 118 --RQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGML 175
Query: 650 LRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRP-----GLQVILMSATLN 704
LR D+ L+ S +I+DE HERT +D L V+K +R L+VI+MSAT++
Sbjct: 176 LREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMD 235
Query: 705 AELFSDYFNSCPVITIPGRTFPVDQFF 731
+LFS YFN PV+ + GR P+ F+
Sbjct: 236 VDLFSQYFNGAPVLYLEGRQHPIQVFY 262
>gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo sapiens]
Length = 779
Score = 152 bits (385), Expect = 2e-36
Identities = 124/483 (25%), Positives = 231/483 (47%), Gaps = 60/483 (12%)
Query: 824 EKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIK----MLYEQLQSNSL---FNNR 876
++ N I+A++E +D + G ILVFL G EI+ +L++ +S +
Sbjct: 249 DRENTAYIQAIVEVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDT 308
Query: 877 RSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKE 936
+ +I P + S+++++Q+ +F+ PP G+ K +ISTNI+ TS+TID + YV+D G +K+
Sbjct: 309 TLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQ 368
Query: 937 KRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQR 996
++ G++ LE +S++ ALQR GRAGR +SG CF +++ +N + +PEI+R
Sbjct: 369 LNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKR 428
Query: 997 VPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLG 1056
L + L +K L + + ++PP+ + + +L A+ +T LG
Sbjct: 429 TSLTSVVLTLKCLAIHDV-----IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLG 483
Query: 1057 YHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDK--KEEANQKKLEF 1114
+ P+ + ++ + C D L IAA L+ ++ F+ P D ++EA Q+ E
Sbjct: 484 LSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHREL 543
Query: 1115 AFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIG 1174
A + ++ G AS +C+++++ R L ++ Q EL+
Sbjct: 544 AAKAGGFNDFATLAVIFEQCKSSGAPAS--WCQKHWIHWRCLFSAFRVEAQLRELI---- 597
Query: 1175 FAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPK--LISAMLCAALYPNVVQVKSPE 1232
R++++++ + E PK ++ LCA + NV +
Sbjct: 598 --------RKLKQQS-----------DFPKETFEGPKHEVLRRCLCAGYFKNV--ARRSV 636
Query: 1233 GKFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRV 1292
G+ T G R P VHIHPSS ++ + ++++HE + T++V
Sbjct: 637 GRTFCTVDG--RGSP--------------VHIHPSSALHE-QETKLEWIIFHEVLVTTKV 679
Query: 1293 FIR 1295
+ R
Sbjct: 680 YAR 682
Score = 136 bits (342), Expect = 2e-31
Identities = 73/194 (37%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 543 SLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPR 602
+ P ++R+ I+ +R + ++++G TG GKTTQ+P+++ + + + I TQPR
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFS----QHGMIGVTQPR 107
Query: 603 RISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGV 662
+++AISVA+RVA+E +G VGYQ+R + S T + Y T G LL+ + GD L
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKF 167
Query: 663 SHIIVDEVHERTEESDFLLLVLKDIV-----SQRPGLQVILMSATLNAELFSDYFNSCPV 717
S II+DE HERT +D L +LK + +++ L+V++MSAT+ S +F +CP+
Sbjct: 168 SVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPI 227
Query: 718 ITIPGRTFPVDQFF 731
IPGR +PV + F
Sbjct: 228 FDIPGRLYPVREKF 241
>gi|169211440 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box
polypeptide 40 [Homo sapiens]
Length = 452
Score = 136 bits (342), Expect = 2e-31
Identities = 73/194 (37%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 543 SLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPR 602
+ P ++R+ I+ +R + ++++G TG GKTTQ+P+++ + + + I TQPR
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFS----QHGMIGVTQPR 107
Query: 603 RISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGV 662
+++AISVA+RVA+E +G VGYQ+R + S T + Y T G LL+ + GD L
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKF 167
Query: 663 SHIIVDEVHERTEESDFLLLVLKDIV-----SQRPGLQVILMSATLNAELFSDYFNSCPV 717
S II+DE HERT +D L +LK + +++ L+V++MSAT+ S +F +CP+
Sbjct: 168 SVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPI 227
Query: 718 ITIPGRTFPVDQFF 731
IPGR +PV + F
Sbjct: 228 FDIPGRLYPVREKF 241
Score = 117 bits (293), Expect = 8e-26
Identities = 65/193 (33%), Positives = 116/193 (60%), Gaps = 7/193 (3%)
Query: 824 EKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIK----MLYEQLQSNSLFNNRRS- 878
++ N I+A+++ +D + G ILVFL G EI+ +L++ +S + +
Sbjct: 249 DRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDT 308
Query: 879 --NRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKE 936
+ +I P + S+++++Q+ +F+ PP G+ K +ISTNI+ TS+TID + YV+D G +K+
Sbjct: 309 ILDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQ 368
Query: 937 KRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQR 996
++ G++ LE +S++ ALQR GRAGR +SG CF +++ +N + +PEI+R
Sbjct: 369 LNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKR 428
Query: 997 VPLEQLCLRIKIL 1009
L + L +K L
Sbjct: 429 TSLTSVVLTLKCL 441
>gi|20336300 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Homo
sapiens]
Length = 743
Score = 124 bits (311), Expect = 6e-28
Identities = 68/205 (33%), Positives = 120/205 (58%), Gaps = 2/205 (0%)
Query: 531 SRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPP 590
S ++ +L+ER+ LP W+E+ + + L ++Q+V++SG CGK+ Q+PQ+ + L+
Sbjct: 49 SSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHY 108
Query: 591 EKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLL 650
+ +ICTQ + + + +A RVA E +G VGY I E+ ++ T L YCT +L
Sbjct: 109 QH-GGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQ 167
Query: 651 RRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSD 710
R + + L II+D++HER+ +D LL +LKD++ RP L++I+ S+ +
Sbjct: 168 REMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNS 227
Query: 711 YFNSCPVITIPGRTFPVDQFFLEDA 735
Y+ + PVI + + PV+ +L +A
Sbjct: 228 YYGNVPVIEVKNK-HPVEVVYLSEA 251
Score = 84.7 bits (208), Expect = 6e-16
Identities = 88/367 (23%), Positives = 155/367 (42%), Gaps = 22/367 (5%)
Query: 818 MSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRR 877
+ ++ + + E++L I + HS G I+VFL +I+ + E + S N
Sbjct: 243 VEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQGSNLNPDL 302
Query: 878 SNRCVIHPLHSSLSSEEQQAVFVKPPAGVTK--------IIISTNIAETSITIDDVVYVI 929
V+ PL+ +++ KP K ++++T+ E I + V +VI
Sbjct: 303 GELVVV-PLYP-----KEKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVI 356
Query: 930 DSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQ 989
D G + K Y+ SL +SQ+ A RK G +SG F L+T + +
Sbjct: 357 DVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPL 416
Query: 990 QLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPD 1049
+ E+Q L + L +K +++ + + P +SL + L L AL D
Sbjct: 417 KPAEMQEANLTSMVLFMKRIDIAGLGHCD-----FMNRPAPESLMQALEDLDYLAALDND 471
Query: 1050 ERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVS-PWDKKEEAN 1108
L+ G ++ P+D ++ K +L F C+D LTIAA + + F P +E A
Sbjct: 472 GNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAAL 531
Query: 1109 QKKLEFAFANSDYLALLQAYKGWQLST--KEGVRASYNYCRQNFLSGRVLQEMASLKRQF 1166
F D+ L+ YK +Q +T +CR FL+ L+ ++ +
Sbjct: 532 TCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAEL 591
Query: 1167 TELLSDI 1173
E++ I
Sbjct: 592 LEIIKRI 598
>gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo
sapiens]
Length = 717
Score = 87.8 bits (216), Expect = 7e-17
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 5/195 (2%)
Query: 531 SRQFQSILQERQSLPAWEERETILNLLRKHQ--VVVISGMTGCGKTTQIPQFILDDSLNG 588
S ++ +L++RQ+LP W R T L L + VV++SG G GK+TQIPQ+ + +L
Sbjct: 32 SSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALAR 91
Query: 589 PPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGV 648
+K + TQP ++A S+A RVA E +G VGY I E T L +C +
Sbjct: 92 GFQK-GQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRL 150
Query: 649 LLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDI-VSQRPG-LQVILMSATLNAE 706
LL+ + +++DE ER+ SD L +L+D + + PG L+V++++
Sbjct: 151 LLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEP 210
Query: 707 LFSDYFNSCPVITIP 721
++ + P++ IP
Sbjct: 211 KLRAFWGNPPIVHIP 225
Score = 77.8 bits (190), Expect = 7e-14
Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 24/348 (6%)
Query: 831 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQL--QSNSLFNNRRSNRCVIHPLHS 888
+EA + +++ PG +LVFLP EI + E L + SL R + PLH
Sbjct: 245 VEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVL--PLHP 302
Query: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
QAV+ A K++++ +A+ S ++ + +VIDSG Y+ E
Sbjct: 303 DCG-RAVQAVYEDMDA--RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQ 359
Query: 949 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK- 1007
+S+ A R+ RA G C L+ + P + L L L +K
Sbjct: 360 VLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKR 419
Query: 1008 --ILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVD 1065
I E H ++ P ++L + L L AL D L+ LG L+ P+
Sbjct: 420 RQIAEPGECH--------FLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLA 471
Query: 1066 VRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALL 1125
+ K +L F C+D LT+AA L F P EEA ++ + D+ +L+
Sbjct: 472 PELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRR-ALEHTDGDHSSLI 530
Query: 1126 QAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
Q Y+ + S A +C+ L+ L + L+ + EL+ I
Sbjct: 531 QVYEAFIQS-----GADEAWCQARGLNWAALCQAHKLRGELLELMQRI 573
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 52.8 bits (125), Expect = 2e-06
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 7 RKGKPGKG--GGKGS--SRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRK 52
R G G+G GG+G RGG GGR + +G GGGGGGGGGGGGG R+
Sbjct: 384 RGGFQGRGDYGGRGGYGGRGGYGGRGYGDP-YGGGGGGGGGGGGGGGYRR 432
Score = 49.3 bits (116), Expect = 3e-05
Identities = 26/44 (59%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGG-GGGGGGNR 51
G G+GGG G GGRGG G GGGGGGG GGGGGG R
Sbjct: 343 GGGGRGGGGGG--GGRGGWGGGGGGWGGGGGGGGGWGGGGGGGR 384
Score = 48.9 bits (115), Expect = 3e-05
Identities = 25/48 (52%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 6 RRKGKPGKGG----GKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
R++G G+GG G G RGG GG G GGG GGGGGGGGG
Sbjct: 328 RQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGG 375
Score = 46.6 bits (109), Expect = 2e-04
Identities = 22/41 (53%), Positives = 23/41 (56%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G G GGG+G GG G G GGGGGGGGG GGG
Sbjct: 339 GGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGG 379
Score = 45.4 bits (106), Expect = 4e-04
Identities = 24/50 (48%), Positives = 24/50 (48%)
Query: 7 RKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSR 56
R G G GGG G GG GG G G GGGGGGGGG G R
Sbjct: 335 RGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGR 384
Score = 44.3 bits (103), Expect = 8e-04
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G+ G GGG G G GG G GG GGGGGGG GG
Sbjct: 346 GRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGG 386
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/48 (43%), Positives = 22/48 (45%)
Query: 14 GGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDG 61
GGG+G GG GG G G GG GGGGGG G W G
Sbjct: 332 GGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGG 379
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/40 (50%), Positives = 22/40 (55%)
Query: 8 KGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGG 47
+G G GGG+G GG GG G GGGGGGG GG
Sbjct: 347 RGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGG 386
Score = 37.4 bits (85), Expect = 0.10
Identities = 20/41 (48%), Positives = 20/41 (48%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G G GG G GGRGG G GG GG GG GG G
Sbjct: 369 GGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRG 409
Score = 37.4 bits (85), Expect = 0.10
Identities = 20/40 (50%), Positives = 20/40 (50%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNR 51
G GGG G GG GGR GG GG GG GG G R
Sbjct: 369 GGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGR 408
Score = 33.5 bits (75), Expect = 1.5
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 27 RSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDG 61
R G GGGGGGGG GGG W G
Sbjct: 328 RQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGG 362
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 52.0 bits (123), Expect = 4e-06
Identities = 22/41 (53%), Positives = 24/41 (58%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G PG G +S GG GG + GGGGGGGGGGGGG
Sbjct: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGG 238
Score = 42.0 bits (97), Expect = 0.004
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 2 SSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
S++ G G GGG +S GG GG G GGGGGGG G GG
Sbjct: 205 SAAASAGGAGGAGGGGPASAGGGGG--------GGGGGGGGGAAGAGG 244
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 52.0 bits (123), Expect = 4e-06
Identities = 22/41 (53%), Positives = 24/41 (58%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G PG G +S GG GG + GGGGGGGGGGGGG
Sbjct: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGG 238
Score = 42.0 bits (97), Expect = 0.004
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 2 SSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
S++ G G GGG +S GG GG G GGGGGGG G GG
Sbjct: 205 SAAASAGGAGGAGGGGPASAGGGGG--------GGGGGGGGGAAGAGG 244
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 51.2 bits (121), Expect = 7e-06
Identities = 37/89 (41%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 8 KGKPGKGGGKGSSRGGRG---GRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDGDDF 64
KG G GGG G GG G G + G GGGGGGGGGGGGG + RI G
Sbjct: 9 KGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRIL--GGVI 66
Query: 65 CIFSESRR-------PSRPSNSNISKGES 86
SE+ P R SNI ES
Sbjct: 67 SAISEAAAQYNPEPPPPRTHYSNIEANES 95
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 51.2 bits (121), Expect = 7e-06
Identities = 37/89 (41%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 8 KGKPGKGGGKGSSRGGRG---GRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDGDDF 64
KG G GGG G GG G G + G GGGGGGGGGGGGG + RI G
Sbjct: 9 KGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRIL--GGVI 66
Query: 65 CIFSESRR-------PSRPSNSNISKGES 86
SE+ P R SNI ES
Sbjct: 67 SAISEAAAQYNPEPPPPRTHYSNIEANES 95
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/82 (41%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGG-GGGGGGNRKASSRIWDDGDDFCIF 67
G G G G GSS GG GG S GS GGGGGG GGG G +S + G
Sbjct: 507 GSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGG------ 560
Query: 68 SESRRPSRPSNSNISKGESRPK 89
S S+S+ S GES K
Sbjct: 561 --SSSGGHKSSSSGSVGESSSK 580
Score = 47.0 bits (110), Expect = 1e-04
Identities = 26/54 (48%), Positives = 27/54 (50%)
Query: 2 SSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS 55
SSS G G G GSS GG GG S GS GGG GGG G K+SS
Sbjct: 517 SSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSS 570
Score = 45.4 bits (106), Expect = 4e-04
Identities = 23/45 (51%), Positives = 24/45 (53%)
Query: 6 RRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGN 50
R G G G G GSS GG G H GS GGG GGG GGG+
Sbjct: 464 RGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGS 508
Score = 44.3 bits (103), Expect = 8e-04
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 3 SSVRRKGKPGKGG-GKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS 55
S + +G G GG G GS GG GG S S G G GGG GG GGG SS
Sbjct: 451 SLLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSS 504
Score = 44.3 bits (103), Expect = 8e-04
Identities = 23/47 (48%), Positives = 23/47 (48%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS 55
G G G GSS GG GG S G GGG GGG GGG SS
Sbjct: 472 GYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSS 518
Score = 41.6 bits (96), Expect = 0.005
Identities = 22/40 (55%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 12 GKGGGKG-SSRGGRGGRSHASKSHGSGGGGGGGGGGGGGN 50
G GGG G SS GG GG S S G G GGG GG GG+
Sbjct: 486 GHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGS 525
Score = 40.4 bits (93), Expect = 0.012
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGG--GGGNRKASS 55
G GGG G GG G + S G G GGG GGG GG+ +SS
Sbjct: 479 GGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSS 527
Score = 39.3 bits (90), Expect = 0.027
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGN 50
G G G G GSS GG G + S G GG GG GGG+
Sbjct: 493 GSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGS 534
Score = 38.1 bits (87), Expect = 0.059
Identities = 22/43 (51%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 9 GKPGKGGGKGSSRGGR--GGRSHASKSHGSGGGGGGGGGGGGG 49
G GG G S GG GG S S G GG GGGG GGG G
Sbjct: 90 GSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFG 132
Score = 36.6 bits (83), Expect = 0.17
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 29 HASKSHGSGGGGGGGGGGGGG 49
H S S GGGGGGG GGGGG
Sbjct: 10 HYSSSRSGGGGGGGGCGGGGG 30
Score = 36.6 bits (83), Expect = 0.17
Identities = 19/41 (46%), Positives = 20/41 (48%)
Query: 8 KGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGG 48
+G G GS G GG S S G G GGGG GGGG
Sbjct: 86 RGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGG 126
Score = 36.2 bits (82), Expect = 0.22
Identities = 23/51 (45%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 2 SSSVRRKGKPGKGGGKGSSRGGRGGRS--HASKSHGSGGGGGGGGGGGGGN 50
SSS GGG G GG GG S S S GS GGG GG GG+
Sbjct: 6 SSSKHYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGS 56
Score = 35.8 bits (81), Expect = 0.29
Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 9 GKPGKGGGKGSSRGGR-GGRSHASKSHGSGGGGGGGGGGGGGN 50
G G G GS GG GG S G GG GGG GGG GG+
Sbjct: 96 GSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGD 138
Score = 35.4 bits (80), Expect = 0.38
Identities = 21/42 (50%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 9 GKPGKGG-GKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G G GG G GS RG G S GS GGG GGG GG
Sbjct: 73 GYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGG 114
Score = 34.3 bits (77), Expect = 0.85
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 30 ASKSHGSGGGGGGGGGGGGGNRKASS 55
+S+S G GGGGG GGGGG + + SS
Sbjct: 13 SSRSGGGGGGGGCGGGGGVSSLRISS 38
Score = 33.5 bits (75), Expect = 1.5
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 27 RSHASKSHGSG--GGGGGGGGGGGGNRKASSRI 57
R +SK + S GGGGGGGG GGG +S RI
Sbjct: 4 RYSSSKHYSSSRSGGGGGGGGCGGGGGVSSLRI 36
Score = 33.5 bits (75), Expect = 1.5
Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 3 SSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHG------SGGGGGGGGGGGGGNR 51
SS+R G GG SS G GG S G SGG GG GG GGG R
Sbjct: 32 SSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFR 86
Score = 33.1 bits (74), Expect = 1.9
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 8 KGKPGKGGGKGS------SRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS 55
KG G G G SRG GG S G GG GG GGG G+ +SS
Sbjct: 40 KGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSS 93
Score = 33.1 bits (74), Expect = 1.9
Identities = 18/41 (43%), Positives = 19/41 (46%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G G GG G GG S+ S S G GG GGG GG
Sbjct: 69 GSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGG 109
Score = 32.0 bits (71), Expect = 4.2
Identities = 18/47 (38%), Positives = 21/47 (44%)
Query: 14 GGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDD 60
GG G G GG G GGG GG GG GN K + + +D
Sbjct: 109 GGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLND 155
Score = 31.6 bits (70), Expect = 5.5
Identities = 19/54 (35%), Positives = 22/54 (40%)
Query: 2 SSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS 55
SSS G GGG G G GG S + +G G GG G+ SS
Sbjct: 525 SSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESS 578
>gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo
sapiens]
Length = 305
Score = 50.1 bits (118), Expect = 2e-05
Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Query: 12 GKGGGKGSSRGGRGGRSHAS---------------KSHGSGGGGGGG-----GGGGGGNR 51
G GGG SSRGGRGGR S+G GGGGGG GGGGGG+
Sbjct: 183 GGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSS 242
Query: 52 KASSRIWDDGDDFCIFSESRRPSRPSNSNISKGESRPKW 90
S + F +S+ + P S G W
Sbjct: 243 YGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSW 281
Score = 38.9 bits (89), Expect = 0.035
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 14/59 (23%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGG--------------GGGGGGGNRKASSR 56
G GGG + GG GG S+ +G+G GG G GGGGGGG R
Sbjct: 226 GGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWGGR 284
Score = 35.4 bits (80), Expect = 0.38
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 10 KPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGG 45
K G GGG G S G GRS++ G GGGGG GG
Sbjct: 269 KSGGGGGGGGSSWG--GRSNSGPYRGGYGGGGGYGG 302
Score = 35.4 bits (80), Expect = 0.38
Identities = 21/39 (53%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGN 50
G GGG GSS GGR S S GG GGGGG GG +
Sbjct: 272 GGGGGGGSSWGGR------SNSGPYRGGYGGGGGYGGSS 304
Score = 33.5 bits (75), Expect = 1.5
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 13/56 (23%)
Query: 14 GGGKGSSRGGR---------GGRSHASKSHG----SGGGGGGGGGGGGGNRKASSR 56
GGG GSS GG G S S+G GGGGGGG GG + R
Sbjct: 236 GGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWGGRSNSGPYR 291
Score = 31.2 bits (69), Expect = 7.2
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 14 GGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G K GG GG S +S+ GG GGGGG G
Sbjct: 266 GPMKSGGGGGGGGSSWGGRSNSGPYRGGYGGGGGYG 301
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 48.1 bits (113), Expect = 6e-05
Identities = 29/58 (50%), Positives = 30/58 (51%), Gaps = 16/58 (27%)
Query: 10 KPG---KGGGKGS-----SRGGRGGRSHASKSHGSG--------GGGGGGGGGGGGNR 51
KPG +GGG G RGGRGGR G G GGGGGGGGGGGG R
Sbjct: 2 KPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGR 59
Score = 48.1 bits (113), Expect = 6e-05
Identities = 23/55 (41%), Positives = 27/55 (49%)
Query: 8 KGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDGD 62
+G G GG+G G GGR G G GGGGGGGGGGG + G+
Sbjct: 15 RGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGN 69
Score = 48.1 bits (113), Expect = 6e-05
Identities = 26/51 (50%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 7 RKGKPGKGG-GKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSR 56
R G+ G+GG G G RGG G R G GGGGGGGG GGGG +R
Sbjct: 21 RGGRGGRGGFGGGRGRGG-GFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNR 70
Score = 38.1 bits (87), Expect = 0.059
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 6 RRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS 55
R +G+ G GGG G GGRGG S GG G G GG GN+ +
Sbjct: 41 RGRGRGGGGGGGGGGGGGRGGGGFHS-----GGNRGRGRGGKRGNQSGKN 85
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 47.4 bits (111), Expect = 1e-04
Identities = 23/42 (54%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGN 50
G G GGG G GGRG S+GSGGG G GGGGGG+
Sbjct: 537 GSYGSGGGGG---GGRGSYGSGGSSYGSGGGSYGSGGGGGGH 575
Score = 46.2 bits (108), Expect = 2e-04
Identities = 21/36 (58%), Positives = 22/36 (61%)
Query: 16 GKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNR 51
G GS GG GG S+GSGGG G GGGGGG R
Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR 549
Score = 42.4 bits (98), Expect = 0.003
Identities = 25/53 (47%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 1 MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGG----GGGGGG 49
+S SV R G G G G G GG GG G GG GGGG G GGGG
Sbjct: 76 ISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGG 128
Score = 41.2 bits (95), Expect = 0.007
Identities = 20/46 (43%), Positives = 22/46 (47%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKAS 54
G G GGG GS G + S G GGG GG G GGG+ S
Sbjct: 567 GSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGS 612
Score = 40.4 bits (93), Expect = 0.012
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 9 GKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASSRIWDDG 61
G G G G RGG GG S S G G GGG GG GG +S + G
Sbjct: 576 GSYGSGSSSGGYRGGSGGGGGGS-SGGRGSGGGSSGGSIGGRGSSSGGVKSSG 627
Score = 40.0 bits (92), Expect = 0.016
Identities = 23/45 (51%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 12 GKGGGK-GSSRGGRGGR-SHASKSHGSGGGGGGGGGGGGGNRKAS 54
G GGG GS GG GGR S+ S G GGG G GGGG S
Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGS 577
Score = 40.0 bits (92), Expect = 0.016
Identities = 24/50 (48%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 12 GKGGGKGSSRGGRGGR-SHASKS-----HGSGGGGGGGGGGGGGNRKASS 55
G GGG S GG GG S+ S S G GGGGGG GG G+ SS
Sbjct: 560 GSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSS 609
Score = 39.7 bits (91), Expect = 0.020
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 8 KGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKAS 54
+G G G G G S G GG S+ S G GGGGG G G GG+ S
Sbjct: 518 RGGGGGGYGSGGSSYGSGGGSYGS---GGGGGGGRGSYGSGGSSYGS 561
Score = 38.5 bits (88), Expect = 0.045
Identities = 20/38 (52%), Positives = 20/38 (52%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G GG G GG G S G GGGG GGGG GGG
Sbjct: 105 GGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGG 142
Score = 38.1 bits (87), Expect = 0.059
Identities = 19/37 (51%), Positives = 19/37 (51%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGG 48
G GG G GG GG G GG GGGG GGGG
Sbjct: 102 GGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGG 138
Score = 37.0 bits (84), Expect = 0.13
Identities = 19/38 (50%), Positives = 19/38 (50%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGG 49
G GG G GG GG G GG GGGG GGG G
Sbjct: 107 GGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYG 144
Score = 35.4 bits (80), Expect = 0.38
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 12 GKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS 55
G GGG G S GGRG S S GS GG G GG + +SS
Sbjct: 590 GSGGGGGGSSGGRG--SGGGSSGGSIGGRGSSSGGVKSSGGSSS 631
Score = 34.7 bits (78), Expect = 0.65
Identities = 31/74 (41%), Positives = 32/74 (43%), Gaps = 26/74 (35%)
Query: 2 SSSVRRKG-------KPGKGGGKGSSRGGRGGRS----HASKS----------HGSG--- 37
SSS RR G G GGG + GG G RS SKS GSG
Sbjct: 33 SSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGG 92
Query: 38 --GGGGGGGGGGGG 49
GGGG GGGG GG
Sbjct: 93 GYGGGGFGGGGFGG 106
Score = 33.5 bits (75), Expect = 1.5
Identities = 19/49 (38%), Positives = 21/49 (42%)
Query: 2 SSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGN 50
SSS +G G GGG S G GG S G G GG GG +
Sbjct: 582 SSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSS 630
Score = 33.1 bits (74), Expect = 1.9
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 2 SSSVRRKGKPGKGGGKGSSRGGRGGRSHAS-KSHGSGGGGGGGGGGGGGNRKASS 55
SS R G G GGG RG GG S S GS GG GG + S+
Sbjct: 583 SSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSSVKFVST 637
Score = 31.2 bits (69), Expect = 7.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 28 SHASKSHGSGGGGGGGGGGGGGNRKAS 54
SH + S G GGGGGG G GG+ S
Sbjct: 508 SHTTISGGGSRGGGGGGYGSGGSSYGS 534
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,271,323
Number of Sequences: 37866
Number of extensions: 2440855
Number of successful extensions: 29076
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 16370
Number of HSP's gapped (non-prelim): 6037
length of query: 1386
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1271
effective length of database: 13,892,928
effective search space: 17657911488
effective search space used: 17657911488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.