Guide to the Human Genome
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Name: DHX29 Sequence: fasta or formatted (1369aa) NCBI GI: 67782362
Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 29

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         98           6
 C cysteine            1.4         19           1
 D aspartate           4.6         63           2
 E glutamate           8.7        119           5
 F phenylalanine       3.5         48           1
 G glycine             4.6         63           2
 H histidine           2.2         30           1
 I isoleucine          5.4         74           2
 K lysine              8.5        116           3
 L leucine            10.8        148           3
 M methionine          1.6         22           1
 N asparagine          4.5         62           2
 P proline             4.7         64           3
 Q glutamine           5.3         73           8
 R arginine            5.3         73           2
 S serine              7.0         96           3
 T threonine           4.9         67           2
 V valine              6.1         83           4
 W tryptophan          0.9         13           1
 Y tyrosine            2.8         38           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
DHX36                 0.206   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX57                 0.205   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
DHX36                 0.198   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX9                  0.158   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
DHX30                 0.148   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.148   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
TDRD9                 0.104   tudor domain containing 9 
YTHDC2                0.098   YTH domain containing 2 
DHX38                 0.096   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX15                 0.081   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX33                 0.081   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX40                 0.076   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
DHX34                 0.072   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
DHX8                  0.056   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX35                 0.055   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX16                 0.053   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
LOC100134387          0.047   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX37                 0.042   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DHX32                 0.041   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DQX1                  0.025   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
MAP1B                 0.010   microtubule-associated protein 1B 
WDR87                 0.009   NYD-SP11 protein 
LOC283685             0.009   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ZNF318                0.008   zinc finger protein 318 
LOC100133758          0.008   PREDICTED: hypothetical protein, partial 
CCDC34                0.007   coiled-coil domain containing 34 isoform 1 
LOC283685             0.007   PREDICTED: golgi autoantigen, golgin subfamily a-li...
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
TCHH                  0.007   trichohyalin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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