Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DHX33 Sequence: fasta or formatted (707aa) NCBI GI: 20336302
Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 33

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         55           2
 C cysteine            1.8         13           1
 D aspartate           4.8         34           2
 E glutamate           5.5         39           2
 F phenylalanine       3.7         26           1
 G glycine             6.4         45           5
 H histidine           2.1         15           1
 I isoleucine          5.1         36           2
 K lysine              5.7         40           2
 L leucine            10.2         72           2
 M methionine          3.0         21           1
 N asparagine          2.4         17           1
 P proline             6.1         43           2
 Q glutamine           5.4         38           2
 R arginine            6.8         48           2
 S serine              6.5         46           2
 T threonine           6.1         43           2
 V valine              7.1         50           2
 W tryptophan          0.4          3           1
 Y tyrosine            3.3         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX8                  0.385   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX16                 0.377   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX35                 0.373   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX38                 0.360   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX15                 0.341   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX40                 0.273   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
DHX34                 0.231   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
LOC100134387          0.207   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX32                 0.190   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DQX1                  0.169   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
TDRD9                 0.163   tudor domain containing 9 
DHX30                 0.160   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.160   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
DHX9                  0.158   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
DHX29                 0.158   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
DHX36                 0.153   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX37                 0.123   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DHX36                 0.103   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX57                 0.101   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
YTHDC2                0.098   YTH domain containing 2 
LOC338758             0.009   PREDICTED: hypothetical protein 
LOC338758             0.009   PREDICTED: hypothetical protein 
LOC338758             0.009   PREDICTED: hypothetical protein 
LOC100130360          0.007   PREDICTED: hypothetical protein 
SLC22A23              0.007   solute carrier family 22, member 23 isoform a [Homo...
BRSK1                 0.007   BR serine/threonine kinase 1 
WIPF3                 0.007   WAS/WASL interacting protein family, member 3 [Homo...
LOC100293492          0.006   PREDICTED: hypothetical protein 
LOC100292407          0.006   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press