Guide to the Human Genome
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Name: DQX1 Sequence: fasta or formatted (717aa) NCBI GI: 163914394
Description:

DEAQ box polypeptide 1 (RNA-dependent ATPase)

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         66           2
 C cysteine            2.9         21           2
 D aspartate           5.3         38           3
 E glutamate           8.1         58           3
 F phenylalanine       3.3         24           1
 G glycine             5.4         39           1
 H histidine           1.7         12           1
 I isoleucine          2.8         20           1
 K lysine              2.4         17           1
 L leucine            14.8        106           3
 M methionine          1.3          9           1
 N asparagine          1.8         13           1
 P proline             8.4         60           3
 Q glutamine           5.2         37           1
 R arginine            6.8         49           2
 S serine              7.7         55           3
 T threonine           3.2         23           1
 V valine              6.0         43           4
 W tryptophan          1.4         10           1
 Y tyrosine            2.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo... 
DHX32                 0.388   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DHX15                 0.289   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX8                  0.198   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX38                 0.190   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX16                 0.187   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX35                 0.183   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX40                 0.165   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
DHX33                 0.165   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX34                 0.127   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
LOC100134387          0.101   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX36                 0.082   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX30                 0.082   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.082   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
DHX36                 0.079   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX9                  0.064   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
DHX37                 0.048   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DHX29                 0.046   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
DHX57                 0.044   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
YTHDC2                0.043   YTH domain containing 2 
TDRD9                 0.034   tudor domain containing 9 
ACOT11                0.005   thioesterase, adipose associated isoform BFIT1 [Homo...
MYO9B                 0.004   myosin IXB isoform 2 
MYO9B                 0.004   myosin IXB isoform 1 
FANCE                 0.004   Fanconi anemia, complementation group E 
STAT6                 0.004   signal transducer and activator of transcription 6 [...
SCRIB                 0.004   scribble isoform b 
SCRIB                 0.004   scribble isoform a 
CCDC17                0.004   coiled-coil domain containing 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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