Guide to the Human Genome
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Name: DHX8 Sequence: fasta or formatted (1220aa) NCBI GI: 4826690
Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 8

Referenced in:

DEAD / H Helicase Family
Capping and Splicing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         75           2
 C cysteine            1.2         15           2
 D aspartate           6.6         80           2
 E glutamate           8.1         99           3
 F phenylalanine       2.9         35           2
 G glycine             4.9         60           2
 H histidine           1.6         20           1
 I isoleucine          5.2         64           2
 K lysine              7.4         90           4
 L leucine             8.9        109           2
 M methionine          3.4         41           2
 N asparagine          3.2         39           2
 P proline             5.6         68           3
 Q glutamine           4.4         54           2
 R arginine            8.0         98           3
 S serine              6.2         76           2
 T threonine           6.1         74           2
 V valine              6.5         79           2
 W tryptophan          0.8         10           1
 Y tyrosine            2.8         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX16                 0.307   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX38                 0.306   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX15                 0.268   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX35                 0.243   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX33                 0.222   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX40                 0.206   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
LOC100134387          0.154   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX32                 0.150   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DHX34                 0.147   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
DQX1                  0.117   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
DHX30                 0.102   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.102   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
DHX9                  0.096   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
TDRD9                 0.082   tudor domain containing 9 
DHX37                 0.079   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DHX36                 0.079   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX36                 0.072   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX57                 0.071   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
DHX29                 0.062   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
YTHDC2                0.056   YTH domain containing 2 
RBM25                 0.026   RNA binding motif protein 25 
DDX46                 0.025   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
ZC3H13                0.022   zinc finger CCCH-type containing 13 
RSRC2                 0.022   arginine/serine-rich coiled-coil 2 isoform b 
RSRC2                 0.022   arginine/serine-rich coiled-coil 2 isoform a 
LUC7L                 0.020   LUC7-like isoform b 
LOC100131202          0.020   PREDICTED: hypothetical protein 
ACIN1                 0.019   apoptotic chromatin condensation inducer 1 
LOC100286959          0.019   PREDICTED: hypothetical protein XP_002343921 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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