Guide to the Human Genome
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Name: DHX40 Sequence: fasta or formatted (779aa) NCBI GI: 31542729
Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 40

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         50           2
 C cysteine            3.0         23           1
 D aspartate           5.6         44           2
 E glutamate           6.9         54           2
 F phenylalanine       4.4         34           2
 G glycine             5.5         43           2
 H histidine           2.7         21           1
 I isoleucine          6.3         49           2
 K lysine              6.5         51           2
 L leucine             9.4         73           3
 M methionine          1.8         14           1
 N asparagine          2.6         20           1
 P proline             4.7         37           4
 Q glutamine           4.6         36           2
 R arginine            8.0         62           3
 S serine              6.2         48           2
 T threonine           5.6         44           2
 V valine              6.7         52           3
 W tryptophan          0.9          7           1
 Y tyrosine            2.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
LOC100134387          0.561   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX8                  0.320   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX38                 0.305   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX16                 0.292   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX15                 0.276   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX35                 0.268   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX33                 0.245   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX34                 0.186   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
DHX36                 0.166   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX32                 0.162   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DHX36                 0.158   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DQX1                  0.152   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
TDRD9                 0.143   tudor domain containing 9 
DHX30                 0.138   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.138   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
DHX9                  0.131   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
DHX29                 0.131   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
DHX37                 0.094   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DHX57                 0.082   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
YTHDC2                0.081   YTH domain containing 2 
NMD3                  0.006   NMD3 homolog 
MURC                  0.005   muscle-related coiled-coil protein 
TTN                   0.005   titin isoform N2-A 
TTN                   0.005   titin isoform novex-2 
TTN                   0.005   titin isoform novex-1 
TTN                   0.005   titin isoform N2-B 
DDX50                 0.005   nucleolar protein GU2 
KALRN                 0.004   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.004   kalirin, RhoGEF kinase isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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