Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DHX35 Sequence: fasta or formatted (703aa) NCBI GI: 20544129
Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 35

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         58           2
 C cysteine            1.6         11           1
 D aspartate           4.3         30           2
 E glutamate           6.5         46           2
 F phenylalanine       4.0         28           2
 G glycine             6.0         42           2
 H histidine           2.4         17           1
 I isoleucine          5.7         40           1
 K lysine              5.3         37           2
 L leucine             9.2         65           2
 M methionine          2.7         19           2
 N asparagine          2.8         20           1
 P proline             5.0         35           3
 Q glutamine           4.8         34           2
 R arginine            6.8         48           2
 S serine              5.4         38           2
 T threonine           5.7         40           2
 V valine              9.4         66           3
 W tryptophan          0.7          5           1
 Y tyrosine            3.4         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX8                  0.426   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX16                 0.415   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX15                 0.395   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX38                 0.389   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX33                 0.377   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX40                 0.302   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
DHX34                 0.224   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
DHX32                 0.211   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
LOC100134387          0.204   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX36                 0.197   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX36                 0.190   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DQX1                  0.190   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
DHX9                  0.170   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
DHX30                 0.158   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.158   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
TDRD9                 0.136   tudor domain containing 9 
DHX37                 0.133   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DHX57                 0.113   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
DHX29                 0.109   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
YTHDC2                0.098   YTH domain containing 2 
SEPT12                0.007   septin 12 isoform 1 
SEPT12                0.006   septin 12 isoform 2 
DENND1A               0.006   DENN/MADD domain containing 1A isoform 2 
DENND1A               0.006   DENN/MADD domain containing 1A isoform 1 
ABCA3                 0.005   ATP-binding cassette, sub-family A member 3 
PMVK                  0.004   phosphomevalonate kinase 
ECE2                  0.004   endothelin converting enzyme 2 isoform E 
ECE2                  0.004   endothelin converting enzyme 2 isoform D 
ECE2                  0.004   endothelin converting enzyme 2 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press