Guide to the Human Genome
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Name: DHX30 Sequence: fasta or formatted (1155aa) NCBI GI: 20336290
Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2

Referenced in:

DEAD / H Helicase Family

Other entries for this name:
alt prot [1194aa] DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         79           5
 C cysteine            1.5         17           1
 D aspartate           4.9         57           3
 E glutamate           7.2         83           4
 F phenylalanine       2.8         32           1
 G glycine             6.1         71           2
 H histidine           2.9         34           2
 I isoleucine          4.8         55           2
 K lysine              5.4         62           4
 L leucine            13.0        150           3
 M methionine          1.5         17           2
 N asparagine          3.0         35           2
 P proline             5.8         67           2
 Q glutamine           4.1         47           2
 R arginine            7.8         90           3
 S serine              7.3         84           3
 T threonine           4.7         54           2
 V valine              7.4         85           3
 W tryptophan          1.2         14           2
 Y tyrosine            1.9         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ... 
DHX30                 0.998   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
DHX36                 0.207   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX36                 0.196   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX29                 0.176   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
DHX9                  0.167   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
DHX34                 0.126   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
DHX16                 0.112   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX8                  0.108   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
TDRD9                 0.107   tudor domain containing 9 
YTHDC2                0.104   YTH domain containing 2 
DHX57                 0.102   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
DHX15                 0.100   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX38                 0.100   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX33                 0.097   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX35                 0.095   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX40                 0.094   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
LOC100134387          0.084   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX32                 0.055   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DQX1                  0.051   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
DHX37                 0.044   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
STAT2                 0.006   signal transducer and activator of transcription 2 [H...
RGL2                  0.005   ral guanine nucleotide dissociation stimulator-like 2...
HELB                  0.005   helicase (DNA) B 
DHX58                 0.005   RNA helicase LGP2 
RPS6KA6               0.005   ribosomal protein S6 kinase polypeptide 6 
ZNF830                0.004   coiled-coil domain containing 16 
DDX53                 0.004   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
CLSPN                 0.004   claspin 
EDEM3                 0.004   ER degradation enhancer, mannosidase alpha-like 3 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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