Guide to the Human Genome
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Name: RSBN1 Sequence: fasta or formatted (802aa) NCBI GI: 38683851
Description:

round spermatid basic protein 1

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         59           3
 C cysteine            2.0         16           2
 D aspartate           4.7         38           2
 E glutamate           7.4         59           2
 F phenylalanine       4.0         32           1
 G glycine             6.2         50           2
 H histidine           3.5         28           4
 I isoleucine          3.4         27           1
 K lysine              6.2         50           7
 L leucine             7.6         61           3
 M methionine          2.4         19           1
 N asparagine          3.2         26           1
 P proline             7.7         62           6
 Q glutamine           5.7         46           2
 R arginine            7.4         59           4
 S serine              6.7         54           3
 T threonine           5.6         45           3
 V valine              6.1         49           2
 W tryptophan          0.9          7           1
 Y tyrosine            1.9         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   round spermatid basic protein 1 
RSBN1L                0.418   round spermatid basic protein 1-like 
MLL4                  0.017   myeloid/lymphoid or mixed-lineage leukemia 4 
PRR12                 0.017   proline rich 12 
NHS                   0.017   Nance-Horan syndrome protein isoform 1 
LOC100293268          0.015   PREDICTED: hypothetical protein 
SHANK1                0.015   SH3 and multiple ankyrin repeat domains 1 
SRRM1                 0.015   serine/arginine repetitive matrix 1 
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 
HCN2                  0.015   hyperpolarization activated cyclic nucleotide-gated...
AEBP1                 0.015   adipocyte enhancer binding protein 1 precursor [Homo...
MAP7D1                0.015   MAP7 domain containing 1 
SGEF                  0.014   Src homology 3 domain-containing guanine nucleotide...
VASP                  0.014   vasodilator-stimulated phosphoprotein 
GLTSCR1               0.014   glioma tumor suppressor candidate region gene 1 [Ho...
BAI1                  0.014   brain-specific angiogenesis inhibitor 1 precursor [...
WASL                  0.013   Wiskott-Aldrich syndrome gene-like protein 
CENPV                 0.013   proline rich 6 
C6orf132              0.012   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.012   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.012   PREDICTED: hypothetical protein LOC647024 
KDM6B                 0.012   lysine (K)-specific demethylase 6B 
FMNL2                 0.012   formin-like 2 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
MARCH11               0.012   membrane-associated ring finger (C3HC4) 11 
FLJ22184              0.012   PREDICTED: hypothetical protein LOC80164 
TAF4                  0.012   TBP-associated factor 4 
HOXA3                 0.012   homeobox A3 isoform a 
HOXA3                 0.012   homeobox A3 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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