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Search of human proteins with 124249376
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|124249376 proline rich 21 [Homo sapiens]
(389 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|124249376 proline rich 21 [Homo sapiens] 839 0.0
gi|239748030 PREDICTED: hypothetical protein XP_002346496 [Homo ... 378 e-105
gi|239750721 PREDICTED: hypothetical protein, partial [Homo sapi... 79 7e-15
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 79 7e-15
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 74 3e-13
gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo ... 72 9e-13
gi|239753972 PREDICTED: hypothetical protein [Homo sapiens] 69 6e-12
gi|116284392 mucin 2 precursor [Homo sapiens] 67 4e-11
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 64 3e-10
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 64 3e-10
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 63 5e-10
gi|239755199 PREDICTED: hypothetical protein [Homo sapiens] 59 7e-09
gi|239746716 PREDICTED: hypothetical protein XP_002343819 [Homo ... 58 1e-08
gi|193788649 retinoic acid induced 2 [Homo sapiens] 57 3e-08
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 57 4e-08
gi|239755446 PREDICTED: hypothetical protein [Homo sapiens] 57 4e-08
gi|239749927 PREDICTED: hypothetical protein [Homo sapiens] 57 4e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 8e-08
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 55 8e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 54 3e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 53 4e-07
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 53 4e-07
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 53 4e-07
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 53 4e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 53 5e-07
gi|55750053 atrophin-1 [Homo sapiens] 52 7e-07
gi|55750041 atrophin-1 [Homo sapiens] 52 7e-07
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 50 3e-06
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 50 5e-06
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 49 8e-06
>gi|124249376 proline rich 21 [Homo sapiens]
Length = 389
Score = 839 bits (2167), Expect = 0.0
Identities = 389/389 (100%), Positives = 389/389 (100%)
Query: 1 MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPS 60
MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPS
Sbjct: 1 MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPS 60
Query: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL
Sbjct: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
Query: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRP 180
HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRP
Sbjct: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRP 180
Query: 181 FVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHA 240
FVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHA
Sbjct: 181 FVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHA 240
Query: 241 SSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPT 300
SSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPT
Sbjct: 241 SSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPT 300
Query: 301 ALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKSLHLRLFSHSSCLVGFSQ 360
ALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKSLHLRLFSHSSCLVGFSQ
Sbjct: 301 ALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKSLHLRLFSHSSCLVGFSQ 360
Query: 361 QGNVLLLSARATFNTCLLVSNMYFLIISY 389
QGNVLLLSARATFNTCLLVSNMYFLIISY
Sbjct: 361 QGNVLLLSARATFNTCLLVSNMYFLIISY 389
>gi|239748030 PREDICTED: hypothetical protein XP_002346496 [Homo
sapiens]
Length = 221
Score = 378 bits (970), Expect = e-105
Identities = 184/221 (83%), Positives = 190/221 (85%), Gaps = 1/221 (0%)
Query: 169 HGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPS 228
H SS LHPRPF+H S T LF HG SS LHP PF+H SSP AL P LFTHGPS
Sbjct: 2 HACSSTALHPRPFIHGFSFTTFLQQLFPHG-SSTALHPWPFIHGSSPMALHPRLFTHGPS 60
Query: 229 SMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPL 288
S LHP PF H SSP +L P LFTH PSSMPLHPRPF+HASSPTALRPCLFTHGPSSMPL
Sbjct: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
Query: 289 HPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKSLHLRL 348
HPRPFVHASSPTAL PCLFTHGPSSMPLHPRPF+HASSSTSLHPRPFIHASSSKSLHLRL
Sbjct: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSSTSLHPRPFIHASSSKSLHLRL 180
Query: 349 FSHSSCLVGFSQQGNVLLLSARATFNTCLLVSNMYFLIISY 389
FSHSSCLVGFSQQGNVLLLSARATFNTCLLV+NMYFLIISY
Sbjct: 181 FSHSSCLVGFSQQGNVLLLSARATFNTCLLVANMYFLIISY 221
Score = 370 bits (951), Expect = e-103
Identities = 173/197 (87%), Positives = 177/197 (89%), Gaps = 14/197 (7%)
Query: 1 MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPS 60
MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPS
Sbjct: 1 MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPS 60
Query: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL
Sbjct: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
Query: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRP 180
HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASS T+ LHPRP
Sbjct: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSSTS--------------LHPRP 166
Query: 181 FVHASSPTALRPCLFTH 197
F+HASS +L LF+H
Sbjct: 167 FIHASSSKSLHLRLFSH 183
Score = 290 bits (742), Expect = 2e-78
Identities = 140/182 (76%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Query: 32 SSTALHPWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMP 91
SSTALHP PFIHG S +LF HG SSTALHP PF HGSSPM+LHPRLFTH PSS
Sbjct: 5 SSTALHPRPFIHGFSFTTFLQQLFPHG-SSTALHPWPFIHGSSPMALHPRLFTHGPSSTA 63
Query: 92 LHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPR 151
LHP PF H SSP +L P LFTH PSSMPLHPRPFVHASSPTAL PCLFTHGPSSMPLHPR
Sbjct: 64 LHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPR 123
Query: 152 PFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVH 211
PF+HASSPTALPPCLFTHGPSSMPLHPRPF+HASS T+L P F H SS LH R F H
Sbjct: 124 PFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSSTSLHPRPFIHASSSKSLHLRLFSH 183
Query: 212 AS 213
+S
Sbjct: 184 SS 185
Score = 281 bits (719), Expect = 7e-76
Identities = 137/185 (74%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 85 HSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPS 144
H+ SS LHPRPF+H S T LF HG SS LHP PF+H SSP AL P LFTHGPS
Sbjct: 2 HACSSTALHPRPFIHGFSFTTFLQQLFPHG-SSTALHPWPFIHGSSPMALHPRLFTHGPS 60
Query: 145 SMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 204
S LHP PF H SSP +L P LFTH PSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL
Sbjct: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
Query: 205 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRP 264
HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPF+HASS T+L P F H SS LH R
Sbjct: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSSTSLHPRPFIHASSSKSLHLRL 180
Query: 265 FLHAS 269
F H+S
Sbjct: 181 FSHSS 185
Score = 248 bits (634), Expect = 5e-66
Identities = 125/183 (68%), Positives = 133/183 (72%), Gaps = 15/183 (8%)
Query: 57 HGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPS 116
H SSTALHP PF HG S + +LF H SS LHP PF+H SSP AL P LFTHGPS
Sbjct: 2 HACSSTALHPRPFIHGFSFTTFLQQLFPHG-SSTALHPWPFIHGSSPMALHPRLFTHGPS 60
Query: 117 SMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPL 176
S LHP PF H SSP +L P LFTH PSSMPLHPRPF+HASSPTAL PCLFTHGPSSMPL
Sbjct: 61 STALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 120
Query: 177 HPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF--------------VHASSPTALPPCL 222
HPRPFVHASSPTAL PCLFTHGPSSMPLHPRPF +HASS +L L
Sbjct: 121 HPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSSTSLHPRPFIHASSSKSLHLRL 180
Query: 223 FTH 225
F+H
Sbjct: 181 FSH 183
Score = 40.0 bits (92), Expect = 0.004
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 322 VHASSSTSLHPRPFIHASSSKSLHLRLFSHSS 353
+HA SST+LHPRPFIH S + +LF H S
Sbjct: 1 MHACSSTALHPRPFIHGFSFTTFLQQLFPHGS 32
>gi|239750721 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 230
Score = 79.0 bits (193), Expect = 7e-15
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 39/256 (15%)
Query: 110 LFTHGPSSMPLHPR--PFVHASSPTALPPCLFTHGPSSMPLHP--RPFLHASSPTALPPC 165
L H + +HP PF+H PC+ H P +HP P +H S ++ PC
Sbjct: 1 LSIHPSIHLSIHPSIYPFIH--------PCI--HPPICSSIHPSIHPSIHPSIHLSIHPC 50
Query: 166 LFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTALPPC-- 221
+ H P +HP +H S+ + + +S+ LHP P +H S T +
Sbjct: 51 I--HPPICSSIHPS--IHPSTYLFIHLSMHPSIHASIHLHPSIHPSIHPSIHTYMHTSTY 106
Query: 222 LFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTH 281
LF H + +HP +H S ++ P + + +S+ L P HAS + P + H
Sbjct: 107 LFIH----LSMHPSIHIHPSICPSIHPSIHSSIHASIHLSVHPSFHASIHPCIHPSM--H 160
Query: 282 GPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHPR--PFVHASSSTSLHPRPFIH 337
+ + +HP P +HAS + +F + +HP P +HAS S+HP IH
Sbjct: 161 PSTYLFIHPSMHPSIHASIHPPICSSIFP-----LFIHPSLYPSIHASIHLSVHPS--IH 213
Query: 338 ASSSKSLHLRLFSHSS 353
S S+HL S+ S
Sbjct: 214 PSIHPSIHLSFLSYPS 229
Score = 58.2 bits (139), Expect = 1e-08
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 59/239 (24%)
Query: 42 IHGSSPMALHPRLFT------HGPSSTALHPC--PFTHGSSPMSLHPRLFTHSPSSMPLH 93
IH S +++HP ++ H P +++HP P H S +S+HP + H P +H
Sbjct: 3 IHPSIHLSIHPSIYPFIHPCIHPPICSSIHPSIHPSIHPSIHLSIHPCI--HPPICSSIH 60
Query: 94 P--------------RPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTAL--P 135
P P +HA S+ LHP P +H S T +
Sbjct: 61 PSIHPSTYLFIHLSMHPSIHA----------------SIHLHPSIHPSIHPSIHTYMHTS 104
Query: 136 PCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLF 195
LF H + +HP +H S ++ P + + +S+ L P HAS + P +
Sbjct: 105 TYLFIH----LSMHPSIHIHPSICPSIHPSIHSSIHASIHLSVHPSFHASIHPCIHPSM- 159
Query: 196 THGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSSMPLHPR--PFVHASSPTALRPCL 250
H + + +HP P +HAS + +F + +HP P +HAS ++ P +
Sbjct: 160 -HPSTYLFIHPSMHPSIHASIHPPICSSIF-----PLFIHPSLYPSIHASIHLSVHPSI 212
Score = 49.7 bits (117), Expect = 5e-06
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 40/199 (20%)
Query: 1 MHACSSTALHP------RPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRL 54
+H +HP P IH ++ + P ++H P IH S +HP +
Sbjct: 43 IHLSIHPCIHPPICSSIHPSIHPSTYLFIHLSMHP-SIHASIHLHPSIHPS----IHPSI 97
Query: 55 FTHGPSST------ALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRP 108
T+ +ST ++HP H S S+HP + + +S+ L P HAS + P
Sbjct: 98 HTYMHTSTYLFIHLSMHPSIHIHPSICPSIHPSIHSSIHASIHLSVHPSFHASIHPCIHP 157
Query: 109 CLFTHGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCL 166
+ H + + +HP P +HAS +HP P + P + P L
Sbjct: 158 SM--HPSTYLFIHPSMHPSIHAS------------------IHP-PICSSIFPLFIHPSL 196
Query: 167 FTHGPSSMPLHPRPFVHAS 185
+ +S+ L P +H S
Sbjct: 197 YPSIHASIHLSVHPSIHPS 215
Score = 45.8 bits (107), Expect = 7e-05
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 34/147 (23%)
Query: 222 LFTHGPSSMPLHPR--PFVHASSPTALRPCLFTHGPSSMPLHP--RPFLHASSPTALRPC 277
L H + +HP PF+H PC+ H P +HP P +H S ++ PC
Sbjct: 1 LSIHPSIHLSIHPSIYPFIH--------PCI--HPPICSSIHPSIHPSIHPSIHLSIHPC 50
Query: 278 LFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIH 337
+ H P +HP +H S+ LF H L P +HAS +H P IH
Sbjct: 51 I--HPPICSSIHPS--IHPST------YLFIH------LSMHPSIHAS----IHLHPSIH 90
Query: 338 ASSSKSLHLRLFSHSSCLVGFSQQGNV 364
S S+H + + + + S ++
Sbjct: 91 PSIHPSIHTYMHTSTYLFIHLSMHPSI 117
Score = 29.6 bits (65), Expect = 4.9
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 1 MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPS 60
+H C ++HP ++ F+ ++HP P P+ +HP L+ +
Sbjct: 151 IHPCIHPSMHPSTYL-------FIHPSMHPSIHASIHP-PICSSIFPLFIHPSLYPSIHA 202
Query: 61 STALHPCPFTHGSSPMSLH 79
S L P H S S+H
Sbjct: 203 SIHLSVHPSIHPSIHPSIH 221
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 79.0 bits (193), Expect = 7e-15
Identities = 72/252 (28%), Positives = 109/252 (43%), Gaps = 50/252 (19%)
Query: 36 LHPWPFIHGSSPMALHPRLFTHGPSSTALHPC--PFTHGSSPMSLHPRL--FTHSPSSMP 91
+HP P + ++HP + H P+ ++HP P TH S + HP + TH P P
Sbjct: 21 IHP-PLHPPTHSPSIHPSI--HPPTHPSIHPSIHPPTHPS--IHTHPPIHPHTHPPIHPP 75
Query: 92 LHP--RPFVHASSPTALRPCLF------THGPSSMPLHPRPFVHASSPTALPPCLFTHGP 143
HP P +H S +L P TH P+ +HP +H S+ + P + H
Sbjct: 76 THPSIHPLIHPSIHPSLHPPTHSSIHPSTHPPTHSSIHPS--IHPSTHPLIHPSI--HPS 131
Query: 144 SSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFT--HGPSS 201
+ +HP H S+ + P + H P+ P+HP +H + P + + H P+
Sbjct: 132 THSSIHPPTHSHPSTHPLIHPSI--HPPTHSPIHPS--IHPPTHPPTHPSIHSSIHLPTH 187
Query: 202 MPLHP--RPFVHASSPTALPPCLFTHGPSSMPLHP--RPFVHASSPTA-----LRPCLFT 252
+HP F+H S H P+ P+HP PF+H S +A + P L T
Sbjct: 188 SSIHPPTHSFIHPS----------IHPPTHSPIHPLTHPFIHPSDSSAASAGGVGPALQT 237
Query: 253 HGPSSMPLHPRP 264
M HPRP
Sbjct: 238 R----MSGHPRP 245
Score = 75.9 bits (185), Expect = 6e-14
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 48/232 (20%)
Query: 131 PTALPPCLFTHGPSSMP-LHP--RPFLHASSPTALPPCLFTHGP----SSMPLHP--RPF 181
P PP TH PS P +HP P +H S P + TH P + P+HP P
Sbjct: 23 PPLHPP---THSPSIHPSIHPPTHPSIHPSIHPPTHPSIHTHPPIHPHTHPPIHPPTHPS 79
Query: 182 VHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHAS 241
+H ++ P L H P+ +HP TH P+ +HP +H S
Sbjct: 80 IHPLIHPSIHPSL--HPPTHSSIHPS----------------THPPTHSSIHPS--IHPS 119
Query: 242 SPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTA 301
+ + P + H + +HP H S+ + P + H P+ P+HP +H +
Sbjct: 120 THPLIHPSI--HPSTHSSIHPPTHSHPSTHPLIHPSI--HPPTHSPIHPS--IHPPTHPP 173
Query: 302 LRPCLFT--HGPSSMPLHP------RPFVHASSSTSLHP--RPFIHASSSKS 343
P + + H P+ +HP P +H + + +HP PFIH S S +
Sbjct: 174 THPSIHSSIHLPTHSSIHPPTHSFIHPSIHPPTHSPIHPLTHPFIHPSDSSA 225
Score = 74.3 bits (181), Expect = 2e-13
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 62/247 (25%)
Query: 1 MHACSSTALHPRPFIHGFSFTTFLQQLFPHGSSTALHP--WPFIHGSSPMALHPRLFTHG 58
+H + ++H P IH PH + +HP P IH ++HP L H
Sbjct: 50 IHPPTHPSIHTHPPIH------------PH-THPPIHPPTHPSIHPLIHPSIHPSL--HP 94
Query: 59 PSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSM 118
P+ +++HP TH + S+HP + PS+ PL P +H S+ +++ P +H PS+
Sbjct: 95 PTHSSIHPS--THPPTHSSIHPSIH---PSTHPLI-HPSIHPSTHSSIHPPTHSH-PSTH 147
Query: 119 PLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHP 178
PL P +H + + + P + H P+ P HP +H+S H P+ +HP
Sbjct: 148 PLI-HPSIHPPTHSPIHPSI--HPPTHPPTHPS--IHSS----------IHLPTHSSIHP 192
Query: 179 --RPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTA-----LPPCLFTHGPSS 229
F+H S H P+ P+HP PF+H S +A + P L T
Sbjct: 193 PTHSFIHPS----------IHPPTHSPIHPLTHPFIHPSDSSAASAGGVGPALQTR---- 238
Query: 230 MPLHPRP 236
M HPRP
Sbjct: 239 MSGHPRP 245
Score = 67.0 bits (162), Expect = 3e-11
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 34/195 (17%)
Query: 159 PTALPPCLFTHGPSSMP-LHP--RPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSP 215
P PP TH PS P +HP P +H S P + TH P +HP + P
Sbjct: 23 PPLHPP---THSPSIHPSIHPPTHPSIHPSIHPPTHPSIHTHPP----IHPH-----THP 70
Query: 216 TALPPCLFTHGPSSMPL-HP--RPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPT 272
PP TH PS PL HP P +H + +++ P TH P+ +HP +H S+
Sbjct: 71 PIHPP---TH-PSIHPLIHPSIHPSLHPPTHSSIHPS--THPPTHSSIHPS--IHPSTHP 122
Query: 273 ALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSSTSL 330
+ P + H + +HP H S+ + P + H P+ P+HP P H + S+
Sbjct: 123 LIHPSI--HPSTHSSIHPPTHSHPSTHPLIHPSI--HPPTHSPIHPSIHPPTHPPTHPSI 178
Query: 331 HPRPFIHASSSKSLH 345
H IH + S+H
Sbjct: 179 HSS--IHLPTHSSIH 191
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 73.6 bits (179), Expect = 3e-13
Identities = 72/251 (28%), Positives = 97/251 (38%), Gaps = 35/251 (13%)
Query: 87 PSSMPLHPRPFVHASSPTALRP-CLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSS 145
P + P P ++ P P L P +PL P P PT P GP
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMP------PTGPAPS----GPPG 276
Query: 146 MPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLH 205
P P P +P PP H P+S P P VH +P P H P+S
Sbjct: 277 PPQLPPP-----APGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHP 331
Query: 206 PRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPR-- 263
P P VH +P PP H P+ P P VH + P P++ +HP+
Sbjct: 332 PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP 391
Query: 264 ------PFLHASSPTALRPCLFTHGPSSMPLHPR-PFVHASS---------PTALRPCLF 307
P +H +P + P PS+ +HP+ P VH S+ P LRP L
Sbjct: 392 GVHPPAPGMHPQAP-GVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLP 450
Query: 308 THGPSSMPLHP 318
+ GP ++P P
Sbjct: 451 SEGPGNIPPPP 461
Score = 72.4 bits (176), Expect = 7e-13
Identities = 65/223 (29%), Positives = 87/223 (39%), Gaps = 25/223 (11%)
Query: 114 GPSSMPLHPRPFVHASSPTA-LPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPS 172
GP + P P ++ P LP L P +PL P P PT P GP
Sbjct: 226 GPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMP------PTGPAPS-GPPGPP 278
Query: 173 SMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPL 232
+P P P VH +P H P+S P P VH +P PP H P+S
Sbjct: 279 QLP-PPAPGVHPPAPVV-------HPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330
Query: 233 HPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPR- 291
P P VH +P P H P+ P P +H + P + +HP
Sbjct: 331 PPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHP-------QAPGVHPAA 383
Query: 292 PFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRP 334
P VH +P P H P + +HP+P S+ +HP+P
Sbjct: 384 PAVHPQAPGVHPPAPGMH-PQAPGVHPQPPGVHPSAPGVHPQP 425
Score = 71.2 bits (173), Expect = 1e-12
Identities = 63/202 (31%), Positives = 85/202 (42%), Gaps = 28/202 (13%)
Query: 66 PCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF 125
P P H +P+ H P+S P P VH +P P H P+S
Sbjct: 283 PAPGVHPPAPV-------VHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSG------- 328
Query: 126 VHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPR-PFVHA 184
VH +P PP H P+ P +H +P PP H P S +HP+ P VH
Sbjct: 329 VHPPAPGVHPPAPGVHPPA-------PGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHP 381
Query: 185 SSPTALRPCLFTHGPSSMPLHPR-PFVHASSPTALPPCLFTHGPSSMPLHP-RPFVHASS 242
++P A+ P P + +HP+ P VH P P H P +HP P VH +
Sbjct: 382 AAP-AVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVH-PQPPGVHPSNPGVHPPT 439
Query: 243 --PTALRPCLFTHGPSSMPLHP 262
P LRP L + GP ++P P
Sbjct: 440 PMPPMLRPPLPSEGPGNIPPPP 461
Score = 62.8 bits (151), Expect = 5e-10
Identities = 62/206 (30%), Positives = 82/206 (39%), Gaps = 34/206 (16%)
Query: 135 PPCLFTHGPSSMPLHPRPFLHASSPTA-LPPCLFTHGPSSMPLHPRPFVHASSPTALRPC 193
PP L GP + P P ++ P LP L P +PL P P PT P
Sbjct: 220 PPSL-PAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMP------PTGPAPS 272
Query: 194 LFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTH 253
GP P P P +P PP H P+S P P VH +P P H
Sbjct: 273 ----GPPGPPQLPPP-----APGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVH 323
Query: 254 GPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSS 313
P+S P P +H +P P H P+ P VH +P H P S
Sbjct: 324 PPTSGVHPPAPGVHPPAPGVHPPAPGVHPPA-------PGVHPPAPG-------VHPPPS 369
Query: 314 MPLHPR-PFVHASSSTSLHPR-PFIH 337
+HP+ P VH ++ ++HP+ P +H
Sbjct: 370 AGVHPQAPGVH-PAAPAVHPQAPGVH 394
Score = 58.9 bits (141), Expect = 7e-09
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 18/180 (10%)
Query: 163 PPCLFTHGPSSMPLHPRPFVHASSPTALRP-CLFTHGPSSMPLHPRPFVHASSPTALPPC 221
PP L GP + P P ++ P P L P +PL P P +P+ P
Sbjct: 220 PPSL-PAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPT-GPAPSGPP-- 275
Query: 222 LFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTH 281
GP +P P P VH +P H P+S P P +H +P P H
Sbjct: 276 ----GPPQLP-PPAPGVHPPAPVV-------HPPASGVHPPAPGVHPPAPGVHPPAPGVH 323
Query: 282 GPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPR-PFIHASS 340
P+S P P VH +P P H P+ P P VH S +HP+ P +H ++
Sbjct: 324 PPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAA 383
>gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo
sapiens]
Length = 475
Score = 72.0 bits (175), Expect = 9e-13
Identities = 79/276 (28%), Positives = 114/276 (41%), Gaps = 66/276 (23%)
Query: 28 FPH----GSSTAL-----HPWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPM-- 76
FPH GSS AL H W P THGP S+ P H S +
Sbjct: 17 FPHKMPGGSSEALGTVRCHCWC-----------PHNGTHGPHSSGFQP----HNRSGLRV 61
Query: 77 -----SLHPRLFTHSPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVH 127
S+HP + H P+HP P +H+S+ ++ + H + +HP P VH
Sbjct: 62 NKGAASIHPPIHLH--IHPPIHPSIHPPMHSSTHPSIHLFIHIHSSTHPSIHPFIHPSVH 119
Query: 128 ASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPC-LFTHGPSSMPLHP--RPFVHA 184
S+ ++ P TH + +H PF+H P PP L H P +HP P +H
Sbjct: 120 PSNHPSVHPS--THPSTHPSIH--PFIH---PPVHPPIHLHIHPPIHPSVHPSTHPLIHP 172
Query: 185 SSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASS 242
++ P + H + + HP RP VH S+ + P + H P P+HP +H S
Sbjct: 173 PIHPSIHPPI--HPSTHLSTHPSIRPPVHPSTHPSTHPLI--HPPIHPPIHPS--IHPS- 225
Query: 243 PTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCL 278
TH P+ P+ P P H S + C+
Sbjct: 226 ---------THPPTHPPV-PHPSTHPSIHPSYMGCI 251
Score = 68.6 bits (166), Expect = 9e-12
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 42/233 (18%)
Query: 112 THGPSSMPLHPRPF----VHASSPTALPPC-LFTHGPSSMPLHPRPFLHASSPTALPPCL 166
THGP S P V+ + + PP L H P +HP +H+S+ ++ +
Sbjct: 43 THGPHSSGFQPHNRSGLRVNKGAASIHPPIHLHIHPPIHPSIHPP--MHSSTHPSIHLFI 100
Query: 167 FTHGPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPC-LF 223
H + +HP P VH S+ ++ P TH + +HP F+H P PP L
Sbjct: 101 HIHSSTHPSIHPFIHPSVHPSNHPSVHPS--THPSTHPSIHP--FIH---PPVHPPIHLH 153
Query: 224 THGPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHP--RPFLHASSPTALRPCLF 279
H P +HP P +H ++ P + H + + HP RP +H S+ + P +
Sbjct: 154 IHPPIHPSVHPSTHPLIHPPIHPSIHPPI--HPSTHLSTHPSIRPPVHPSTHPSTHPLI- 210
Query: 280 THGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHP 332
H P P+HP +H S TH P+ HP P H S+ S+HP
Sbjct: 211 -HPPIHPPIHPS--IHPS----------THPPT----HP-PVPHPSTHPSIHP 245
Score = 58.9 bits (141), Expect = 7e-09
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 168 THGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP------RPFVHASSPTALPPC 221
THGP S P + S + H P + +HP P +H+S+ ++
Sbjct: 43 THGPHSSGFQPH---NRSGLRVNKGAASIHPPIHLHIHPPIHPSIHPPMHSSTHPSIHLF 99
Query: 222 LFTHGPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLF 279
+ H + +HP P VH S+ ++ P TH + +HP F+H
Sbjct: 100 IHIHSSTHPSIHPFIHPSVHPSNHPSVHPS--THPSTHPSIHP--FIHPP---------- 145
Query: 280 THGPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSSTSLHP--R 333
H P + +HP P VH S+ + P P+HP P +H S+ S HP R
Sbjct: 146 VHPPIHLHIHPPIHPSVHPSTHPLIHP----------PIHPSIHPPIHPSTHLSTHPSIR 195
Query: 334 PFIHASSSKSLH 345
P +H S+ S H
Sbjct: 196 PPVHPSTHPSTH 207
Score = 56.2 bits (134), Expect = 5e-08
Identities = 61/195 (31%), Positives = 84/195 (43%), Gaps = 32/195 (16%)
Query: 9 LHP--RPFIHGFSFTTFLQQLFPHGSSTALHP--WPFIHGSSPMALHPRLFTHGPSSTAL 64
+HP P +H + + LF H S+ HP PFIH S + HP ++
Sbjct: 80 IHPSIHPPMHSSTHPSI--HLFIHIHSST-HPSIHPFIHPSVHPSNHP----------SV 126
Query: 65 HPCPFTHGSSPMSLHPRLFTHSPSSMP--LHPRPFVHASSPTALRPCLFTHGPSSMPLHP 122
HP TH S+ S+HP F H P P LH P +H S + P + H P +HP
Sbjct: 127 HPS--THPSTHPSIHP--FIHPPVHPPIHLHIHPPIHPSVHPSTHPLI--HPPIHPSIHP 180
Query: 123 --RPFVHASS-PTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPR 179
P H S+ P+ PP + PS+ PL P P+ P TH P+ P+ P
Sbjct: 181 PIHPSTHLSTHPSIRPPVHPSTHPSTHPLIHPPIHPPIHPSIHPS---THPPTHPPV-PH 236
Query: 180 PFVHASSPTALRPCL 194
P H S + C+
Sbjct: 237 PSTHPSIHPSYMGCI 251
Score = 42.4 bits (98), Expect = 7e-04
Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 29/133 (21%)
Query: 224 THGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFLHASSPTALRPC--LF 279
THGP S P + S + H P + +HP P +H ++ P LF
Sbjct: 43 THGPHSSGFQPH---NRSGLRVNKGAASIHPPIHLHIHPPIHPSIHPPMHSSTHPSIHLF 99
Query: 280 THGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSSTSLHP--RPF 335
H SS PF+H S +HP P VH S+ S HP PF
Sbjct: 100 IHIHSSTHPSIHPFIHPS------------------VHPSNHPSVHPSTHPSTHPSIHPF 141
Query: 336 IHASSSKSLHLRL 348
IH +HL +
Sbjct: 142 IHPPVHPPIHLHI 154
Score = 32.7 bits (73), Expect = 0.57
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 280 THGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSSTSLHP--RPF 335
THGP S P + S + H P + +HP P +H +S HP F
Sbjct: 43 THGPHSSGFQPH---NRSGLRVNKGAASIHPPIHLHIHPPIHPSIHPPMHSSTHPSIHLF 99
Query: 336 IHASSSKSLHLRLFSHSS 353
IH SS + F H S
Sbjct: 100 IHIHSSTHPSIHPFIHPS 117
>gi|239753972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 298
Score = 69.3 bits (168), Expect = 6e-12
Identities = 77/256 (30%), Positives = 113/256 (44%), Gaps = 58/256 (22%)
Query: 30 HGSST--ALHPWPF--IHGSSPMALHPRLFTHGP----SSTALHPC--PFTHGSSPMSLH 79
H SST +HP IH S+ + +HP TH P ++ +HP P H S+ ++H
Sbjct: 53 HPSSTHPPIHPSTHLPIHPSTHLPIHPS--THPPIHPSTNPPIHPSTNPPIHPSTHPTIH 110
Query: 80 PRLFTHSPSS-MPLHP------RPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPT 132
P TH PS+ +P+HP PF+H + + P P+ P+HP S
Sbjct: 111 PS--THPPSTYLPIHPSAHPLIHPFIHPLTHLFIHP-----PPTHSPIHPP----THSSI 159
Query: 133 ALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHP--RPFVHASSPTAL 190
LP L + P+ +HP P H P+ PP +HP P +H S+ T+
Sbjct: 160 HLPTHLSIYPPTYPSIHPPPTPH---PSIHPP-----------IHPSTHPLIHPSTHTST 205
Query: 191 RPCLFTHGPSSMPLHPRPFVHAS-SPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPC 249
P TH P+ P +P +H+S P PP TH + P+H H S+ + P
Sbjct: 206 HPP--THPPTHPPSNPS--IHSSIHPPIHPP---THPSTHPPIHSS--THPSTYFSTHPP 256
Query: 250 LFTHGPSSMPLHPRPF 265
L + P + RPF
Sbjct: 257 LLS--PKVLQKAFRPF 270
Score = 68.9 bits (167), Expect = 7e-12
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 57/232 (24%)
Query: 145 SMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPF--VHASSPTALRPCLFTHGPSSM 202
+ P HP +H SS PP H + +P+HP +H S+ + P ++
Sbjct: 45 NQPTHPT--IHPSSTH--PPI---HPSTHLPIHPSTHLPIHPSTHPPIHPS------TNP 91
Query: 203 PLHP--RPFVHASSPTALPPCLFTHGPSS-MPLHP------RPFVHASSPTALRPCLFTH 253
P+HP P +H S+ + P TH PS+ +P+HP PF+H + + P
Sbjct: 92 PIHPSTNPPIHPSTHPTIHPS--THPPSTYLPIHPSAHPLIHPFIHPLTHLFIHP----- 144
Query: 254 GPSSMPLHPRPFLHASSPT----------ALRPCLFTHGPSSMPLHP--RPFVHASSPTA 301
P+ P+HP PT ++ P H P+HP P +H S+ T+
Sbjct: 145 PPTHSPIHPPTHSSIHLPTHLSIYPPTYPSIHPPPTPHPSIHPPIHPSTHPLIHPSTHTS 204
Query: 302 LRPCLFTHGPSSMPLHP--RPFVHASSSTSLHP------RPFIHASSSKSLH 345
TH P+ P HP P +H+S +HP P IH+S+ S +
Sbjct: 205 ------THPPTHPPTHPPSNPSIHSSIHPPIHPPTHPSTHPPIHSSTHPSTY 250
Score = 56.6 bits (135), Expect = 4e-08
Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 35/197 (17%)
Query: 1 MHACSSTALHP--RPFIHGFSFTTFLQQLFPHGSSTALHP------WPFIHGSSPMALHP 52
+H ++ +HP P IH + T P + +HP PFIH + + +HP
Sbjct: 85 IHPSTNPPIHPSTNPPIHPSTHPTIHPSTHPPSTYLPIHPSAHPLIHPFIHPLTHLFIHP 144
Query: 53 RLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFT 112
P+ + +HP TH S + H L + P+ +HP P H S + P
Sbjct: 145 P-----PTHSPIHPP--THSSIHLPTH--LSIYPPTYPSIHPPPTPHPS----IHP---- 187
Query: 113 HGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHG 170
P+HP P +H S+ T+ P TH P+ P +P P P TH
Sbjct: 188 ------PIHPSTHPLIHPSTHTSTHPP--THPPTHPPSNPSIHSSIHPPIHPPTHPSTHP 239
Query: 171 PSSMPLHPRPFVHASSP 187
P HP + P
Sbjct: 240 PIHSSTHPSTYFSTHPP 256
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 66.6 bits (161), Expect = 4e-11
Identities = 71/282 (25%), Positives = 97/282 (34%), Gaps = 20/282 (7%)
Query: 59 PSSTALHPCPFTHGSSPMSL-HPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSS 117
P ST P P T S P + P T SP + P SP P ++
Sbjct: 1457 PISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTT 1516
Query: 118 MPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLH 177
+P P ++ T PP P++ P+ P +S T LPP P +
Sbjct: 1517 LPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-----PTSTTTLPPTTTPSPPPTTTTT 1571
Query: 178 PRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPF 237
P P S PT P T ++ P P ++ T PP P++ P+ P
Sbjct: 1572 PPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP--- 1628
Query: 238 VHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHAS 297
+S T L P P + P P S PT P P + P P S
Sbjct: 1629 --PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP----SPPITTTTTPPPTTTPS 1682
Query: 298 SPTALRP-----CLFTHGPSSMPLHPRPFVHASSSTSLHPRP 334
SP P + T P++ P P SST+ P
Sbjct: 1683 SPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPP 1724
Score = 59.7 bits (143), Expect = 4e-09
Identities = 73/292 (25%), Positives = 101/292 (34%), Gaps = 21/292 (7%)
Query: 56 THGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGP 115
T P +T P P + + P + P T + ++ P P ++ T P P
Sbjct: 1398 TPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPP 1457
Query: 116 SSMPLHPRPFVHASSPTAL--PPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSS 173
S P P S PT PP P++ P P S PT P T S+
Sbjct: 1458 ISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTP---ITPPAST 1514
Query: 174 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSSMP 231
L P ++P+ T P++ P P P +S T LPP P +
Sbjct: 1515 TTLPP-----TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTT 1569
Query: 232 LHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHP- 290
P P S PT P P+ P P S PT T P++ P P
Sbjct: 1570 TTPPPTTTPSPPTTTTP----SPPTITTTTPPPTTTPSPPTTTTT---TPPPTTTPSPPT 1622
Query: 291 -RPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSS 341
P +S T L P P + P P S T+ P P I +++
Sbjct: 1623 TTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTT 1674
Score = 37.0 bits (84), Expect = 0.030
Identities = 42/173 (24%), Positives = 59/173 (34%), Gaps = 14/173 (8%)
Query: 165 CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSP----TALPP 220
C+ T P + P P +S T L P P++ P P S P T PP
Sbjct: 1395 CITTPSPPTTTPSPPP----TSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPP 1450
Query: 221 CLFTHGPSSMPLHPRPFVHASSPTAL-RPCLFTHGPSSMPLHPRPFLHASSPTALRPCLF 279
P S P P S PT P T P + P SP P
Sbjct: 1451 TTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1510
Query: 280 THGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHP 332
+++P P ++ T P P++ P+ P +S+T+L P
Sbjct: 1511 PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-----PTSTTTLPP 1558
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 63.5 bits (153), Expect = 3e-10
Identities = 82/286 (28%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 40 PFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMP-LHPRPFV 98
P + SSP L P ++ P+ T + T S+P T +PSS P L P+P +
Sbjct: 40 PTLTPSSPPTLTP---SNTPTLTPSNTPTLTPSSTP--------TLTPSSTPTLTPQPIL 88
Query: 99 HASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASS 158
SS P+ P P +++PT P T PS+ P +S+
Sbjct: 89 TRSST-----------PTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPT----LTPSST 133
Query: 159 PTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHG-PSSMPLHPRPFVHASSPTA 217
PT P T PSS P+ R +P++ RP L P+ P +S+PT
Sbjct: 134 PTLTPSSTPTLTPSSRPILTRSSTPTLTPSS-RPILTRSSTPTLTPSSTPTLTPSSTPTL 192
Query: 218 LPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLF-----THGPSSMPLHPR---PFLHAS 269
P T PSS P+ R +P++ RP L T PSS P+ R P L S
Sbjct: 193 TPSSTPTLTPSSRPILTRSSTPTLTPSS-RPILTPSSTPTLTPSSRPILTRSSTPTLTPS 251
Query: 270 SPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMP 315
S L P ++ P+ P + +++PT T PSS P
Sbjct: 252 STPTLTP---SNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP 294
Score = 62.4 bits (150), Expect = 7e-10
Identities = 81/271 (29%), Positives = 116/271 (42%), Gaps = 53/271 (19%)
Query: 84 THSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGP 143
+++P+ P P +S+PT PSS P+ R +S+PT P T P
Sbjct: 5 SNTPTLTPSSPPTLTPSSTPTLT--------PSSQPILTR----SSTPTLTPSSPPTLTP 52
Query: 144 SSMPLHPRPFLHASSPTALPPCLFTHGPSSMP-LHPRPFVHASSPTALRPCLFTHGPSSM 202
S+ P +++PT P T PSS P L P+P + SS L P + P+
Sbjct: 53 SNTPT----LTPSNTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTP---SSPPTLT 105
Query: 203 PLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP 262
P + +++PT P T PSS P +S+PT PSS P+
Sbjct: 106 PSNTPTLTPSNTPTLTPSNTPTLTPSSTPT----LTPSSTPTLT--------PSSRPILT 153
Query: 263 RPFLHASSPTALRPCLFTHGPSSMPLHPR----PFVHASSPTALRPCLFTHGPSSMP-LH 317
R +S+PT PSS P+ R +S+PT T PSS P L
Sbjct: 154 R----SSTPTLT--------PSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLT 201
Query: 318 P--RPFVHASSSTSLHP--RPFIHASSSKSL 344
P RP + SS+ +L P RP + SS+ +L
Sbjct: 202 PSSRPILTRSSTPTLTPSSRPILTPSSTPTL 232
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 63.5 bits (153), Expect = 3e-10
Identities = 82/286 (28%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 40 PFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMP-LHPRPFV 98
P + SSP L P ++ P+ T + T S+P T +PSS P L P+P +
Sbjct: 40 PTLTPSSPPTLTP---SNTPTLTPSNTPTLTPSSTP--------TLTPSSTPTLTPQPIL 88
Query: 99 HASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASS 158
SS P+ P P +++PT P T PS+ P +S+
Sbjct: 89 TRSST-----------PTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPT----LTPSST 133
Query: 159 PTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHG-PSSMPLHPRPFVHASSPTA 217
PT P T PSS P+ R +P++ RP L P+ P +S+PT
Sbjct: 134 PTLTPSSTPTLTPSSRPILTRSSTPTLTPSS-RPILTRSSTPTLTPSSTPTLTPSSTPTL 192
Query: 218 LPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLF-----THGPSSMPLHPR---PFLHAS 269
P T PSS P+ R +P++ RP L T PSS P+ R P L S
Sbjct: 193 TPSSTPTLTPSSRPILTRSSTPTLTPSS-RPILTPSSTPTLTPSSRPILTRSSTPTLTPS 251
Query: 270 SPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMP 315
S L P ++ P+ P + +++PT T PSS P
Sbjct: 252 STPTLTP---SNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP 294
Score = 62.4 bits (150), Expect = 7e-10
Identities = 81/271 (29%), Positives = 116/271 (42%), Gaps = 53/271 (19%)
Query: 84 THSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGP 143
+++P+ P P +S+PT PSS P+ R +S+PT P T P
Sbjct: 5 SNTPTLTPSSPPTLTPSSTPTLT--------PSSQPILTR----SSTPTLTPSSPPTLTP 52
Query: 144 SSMPLHPRPFLHASSPTALPPCLFTHGPSSMP-LHPRPFVHASSPTALRPCLFTHGPSSM 202
S+ P +++PT P T PSS P L P+P + SS L P + P+
Sbjct: 53 SNTPT----LTPSNTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTP---SSPPTLT 105
Query: 203 PLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP 262
P + +++PT P T PSS P +S+PT PSS P+
Sbjct: 106 PSNTPTLTPSNTPTLTPSNTPTLTPSSTPT----LTPSSTPTLT--------PSSRPILT 153
Query: 263 RPFLHASSPTALRPCLFTHGPSSMPLHPR----PFVHASSPTALRPCLFTHGPSSMP-LH 317
R +S+PT PSS P+ R +S+PT T PSS P L
Sbjct: 154 R----SSTPTLT--------PSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLT 201
Query: 318 P--RPFVHASSSTSLHP--RPFIHASSSKSL 344
P RP + SS+ +L P RP + SS+ +L
Sbjct: 202 PSSRPILTRSSTPTLTPSSRPILTPSSTPTL 232
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 62.8 bits (151), Expect = 5e-10
Identities = 68/236 (28%), Positives = 93/236 (39%), Gaps = 19/236 (8%)
Query: 80 PRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLF 139
P L SP ++ P + S L PC P+ P + +S+PT P
Sbjct: 52 PTLTPSSPPTLTPSNTPTLTPCSTPTLTPC---STPTLTPSNTPTLTPSSTPTLTPSSTP 108
Query: 140 THGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGP 199
T PSS P +S+PT P T PSS P R +S+PT T P
Sbjct: 109 TLTPSSTPT----LTPSSTPTLTPSSTPTLTPSSTPTLTR----SSTPTLTPSSTPTLTP 160
Query: 200 SSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMP 259
SS P +S+PT P T PSS P+ R +P++ + P+ P
Sbjct: 161 SSTPT----LTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTP 216
Query: 260 LHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMP 315
+ + +S+PT T PSS P R +S+PT T PSS P
Sbjct: 217 SNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTR----SSTPTLTPSSTPTLTPSSTP 268
Score = 58.9 bits (141), Expect = 7e-09
Identities = 71/248 (28%), Positives = 98/248 (39%), Gaps = 31/248 (12%)
Query: 40 PFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVH 99
P + SSP L P ++ L PC T +P S +P+ P +
Sbjct: 52 PTLTPSSPPTLTPS------NTPTLTPCS-TPTLTPCS--------TPTLTPSNTPTLTP 96
Query: 100 ASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSP 159
+S+PT T PSS P +S+PT P T PSS P R +S+P
Sbjct: 97 SSTPTLTPSSTPTLTPSSTPT----LTPSSTPTLTPSSTPTLTPSSTPTLTR----SSTP 148
Query: 160 TALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALP 219
T P T PSS P +S+PT T PSS P+ R +P++ P
Sbjct: 149 TLTPSSTPTLTPSSTPT----LTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTP 204
Query: 220 PCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLF 279
+ P+ P + + +S+PT T PSS P R +S+PT
Sbjct: 205 TLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTR----SSTPTLTPSSTP 260
Query: 280 THGPSSMP 287
T PSS P
Sbjct: 261 TLTPSSTP 268
Score = 49.3 bits (116), Expect = 6e-06
Identities = 72/244 (29%), Positives = 96/244 (39%), Gaps = 40/244 (16%)
Query: 114 GPSSMPLHPR----PFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTH 169
G + P PR P + SSP L P ++ P+ P S+PT P T
Sbjct: 38 GEMTGPYGPREMGTPTLTPSSPPTLTP---SNTPTLTPCSTPTLTPCSTPTLTPSNTPTL 94
Query: 170 GPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSS 229
PSS P +S+PT PSS P +S+PT P T PSS
Sbjct: 95 TPSSTPT----LTPSSTPTLT--------PSSTPT----LTPSSTPTLTPSSTPTLTPSS 138
Query: 230 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLH 289
P R +S+PT T PSS P +S+PT T PSS P+
Sbjct: 139 TPTLTR----SSTPTLTPSSTPTLTPSSTPT----LTPSSTPTLTPSSTPTLTPSSRPIL 190
Query: 290 PR----PFVHASSPTALRPCLFTHGPSSMPL---HPRPFVHASSSTSLHP--RPFIHASS 340
R +S+PT T PS+ P P + SS+ +L P RP + SS
Sbjct: 191 TRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSS 250
Query: 341 SKSL 344
+ +L
Sbjct: 251 TPTL 254
>gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 279
Score = 58.9 bits (141), Expect = 7e-09
Identities = 65/207 (31%), Positives = 88/207 (42%), Gaps = 45/207 (21%)
Query: 68 PFTHGSSPMSLHPRLFTHSPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHP--R 123
P H S S HP P+HP P +H S + P + H P+ +HP
Sbjct: 49 PSIHPSIHPSTHP----------PIHPSIHPSIHPSIHPPVHPSI--HPPTRPSIHPSIH 96
Query: 124 PFVHASSPTALPPCLFTHGPSSMPLHPR--PFLHASSPTALPPCL--FTHGPSSMPLHPR 179
P VH S+ + TH P+HP P +H S+ ++ P + F H P HP
Sbjct: 97 PPVHLSTHPS------THPSIHPPIHPSIYPSIHLSTHPSIHPPIHPFIHPSIHPPTHPS 150
Query: 180 PFVHASS-PTALRPCLFTHGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSSMPLHPRP 236
+HAS+ P P TH P+ HP P +H P A PP H P HP
Sbjct: 151 --IHASTHPLIHHPS--THPPTHPSTHPSIHPTIH---PRAHPP---IHPSIHSPTHPS- 199
Query: 237 FVHASSPTALRPCLFTHGPSSMP-LHP 262
+H S+ + P TH PS+ P +HP
Sbjct: 200 -IHPSTHPSTHP--LTH-PSTYPSIHP 222
Score = 58.5 bits (140), Expect = 1e-08
Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 198 GPSSMP-LHP--RPFVHASSPTALPPCLFTHGPSSMPLHP--RPFVHAS--SPTALRPCL 250
GPS P +HP P +H S ++ P + H P +HP RP +H S P L
Sbjct: 48 GPSIHPSIHPSTHPPIHPSIHPSIHPSI--HPPVHPSIHPPTRPSIHPSIHPPVHLSTHP 105
Query: 251 FTHGPSSMPLHPR--PFLHASSPTALRPCL--FTHGPSSMPLHPRPFVHASS-PTALRPC 305
TH P+HP P +H S+ ++ P + F H P HP +HAS+ P P
Sbjct: 106 STHPSIHPPIHPSIYPSIHLSTHPSIHPPIHPFIHPSIHPPTHPS--IHASTHPLIHHPS 163
Query: 306 LFTHGPSSMPLHP--RPFVHASSSTSLHP------RPFIHASSSKSLH 345
TH P+ HP P +H + +HP P IH S+ S H
Sbjct: 164 --THPPTHPSTHPSIHPTIHPRAHPPIHPSIHSPTHPSIHPSTHPSTH 209
Score = 56.6 bits (135), Expect = 4e-08
Identities = 60/187 (32%), Positives = 83/187 (44%), Gaps = 43/187 (22%)
Query: 36 LHP--WPFIHGSSPMALHPRLFTHGPSSTALHPCPF------THGSSPMSLHPRLFTHSP 87
+HP P IH S +HP + H P+ ++HP TH S+ S+HP
Sbjct: 63 IHPSIHPSIHPSIHPPVHPSI--HPPTRPSIHPSIHPPVHLSTHPSTHPSIHP------- 113
Query: 88 SSMPLHPR--PFVHASSPTALRPCL--FTHGPSSMPLHPRPFVHASS-PTALPPCLFTHG 142
P+HP P +H S+ ++ P + F H P HP +HAS+ P P TH
Sbjct: 114 ---PIHPSIYPSIHLSTHPSIHPPIHPFIHPSIHPPTHPS--IHASTHPLIHHPS--THP 166
Query: 143 PSSMPLHP--RPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPS 200
P+ HP P +H P A PP H P HP +H S+ + P TH PS
Sbjct: 167 PTHPSTHPSIHPTIH---PRAHPP---IHPSIHSPTHPS--IHPSTHPSTHP--LTH-PS 215
Query: 201 SMP-LHP 206
+ P +HP
Sbjct: 216 TYPSIHP 222
Score = 48.1 bits (113), Expect = 1e-05
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 254 GPSSMP-LHP--RPFLHASSPTALRPCLFTHGPSSMPLHP--RPFVHAS--SPTALRPCL 306
GPS P +HP P +H S ++ P + H P +HP RP +H S P L
Sbjct: 48 GPSIHPSIHPSTHPPIHPSIHPSIHPSI--HPPVHPSIHPPTRPSIHPSIHPPVHLSTHP 105
Query: 307 FTHGPSSMPLHPR--PFVHASSSTSLHP--RPFIHASSSKSLHLRLFSHSSCLV 356
TH P+HP P +H S+ S+HP PFIH S H + + + L+
Sbjct: 106 STHPSIHPPIHPSIYPSIHLSTHPSIHPPIHPFIHPSIHPPTHPSIHASTHPLI 159
Score = 35.0 bits (79), Expect = 0.12
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 27/114 (23%)
Query: 1 MHACSSTALHP--RPFIHGF-------SFTTFLQQLFPHGSS-----TALHP--WPFIHG 44
+H + ++HP PFIH S L H S+ + HP P IH
Sbjct: 123 IHLSTHPSIHPPIHPFIHPSIHPPTHPSIHASTHPLIHHPSTHPPTHPSTHPSIHPTIHP 182
Query: 45 SSPMALHPRLFTHGPSSTALHPC------PFTHGSSPMSLHPRLFTHSPSSMPL 92
+ +HP + H P+ ++HP P TH S+ S+HP T P + PL
Sbjct: 183 RAHPPIHPSI--HSPTHPSIHPSTHPSTHPLTHPSTYPSIHP---TIHPLTYPL 231
>gi|239746716 PREDICTED: hypothetical protein XP_002343819 [Homo
sapiens]
Length = 217
Score = 58.2 bits (139), Expect = 1e-08
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 176 LHPRP--FVHASSPTALRPCLFTHGPSSMPLHPRPF--VHASSPTALPPCLF--THGPSS 229
+HP F+H S ++ PC+ H P+ +HP + +H S + P + TH
Sbjct: 9 IHPSTHIFIHPSIHPSIHPCI--HPPTYSSIHPPTYSSIHPSVHPHIHPSIHPSTHPHIH 66
Query: 230 MPLHPR-PFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPL 288
+HP P +H S ++RP ++ +HP H S ++ P + H S +
Sbjct: 67 PSIHPSIPSIHPSIHPSIRPSTYSS------IHPST--HISIHPSIHPSIHLHIHPSTHI 118
Query: 289 HPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPR--PFIH 337
P +H+S + P + PS PL P +H S+ +HP+ P IH
Sbjct: 119 FIHPSIHSSIHASTHPHIH---PSIYPLFIHPSIHPSTHPPIHPQIHPSIH 166
Score = 56.2 bits (134), Expect = 5e-08
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 44/203 (21%)
Query: 36 LHP--WPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLH 93
+HP + FIH S+ + +HP + ++HPC H + S+HP ++ S+ H
Sbjct: 1 MHPSIYIFIHPSTHIFIHPSIHP------SIHPC--IHPPTYSSIHPPTYSSIHPSVHPH 52
Query: 94 PRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSSMPLHPR 151
P +H S+ + P + PS +HP P + S+ +++ P TH +HP
Sbjct: 53 IHPSIHPSTHPHIHPSIH---PSIPSIHPSIHPSIRPSTYSSIHPS--THISIHPSIHPS 107
Query: 152 PFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVH 211
LH T + F H P +H+S + P + PS PL P +H
Sbjct: 108 IHLHIHPSTHI----FIH----------PSIHSSIHASTHPHIH---PSIYPLFIHPSIH 150
Query: 212 ASSPTALPPCLFTHGPSSMPLHP 234
S TH P +HP
Sbjct: 151 PS----------THPPIHPQIHP 163
Score = 51.2 bits (121), Expect = 2e-06
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 232 LHPRP--FVHASSPTALRPCLFTHGPSSMPLHPRPF--LHASSPTALRPCLF--THGPSS 285
+HP F+H S ++ PC+ H P+ +HP + +H S + P + TH
Sbjct: 9 IHPSTHIFIHPSIHPSIHPCI--HPPTYSSIHPPTYSSIHPSVHPHIHPSIHPSTHPHIH 66
Query: 286 MPLHPR-PFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRP--FIHASSSK 342
+HP P +H S ++RP ++ S + P +H S +HP FIH S
Sbjct: 67 PSIHPSIPSIHPSIHPSIRPSTYSSIHPSTHISIHPSIHPSIHLHIHPSTHIFIHPSIHS 126
Query: 343 SLHLRLFSH 351
S+H H
Sbjct: 127 SIHASTHPH 135
Score = 51.2 bits (121), Expect = 2e-06
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 1 MHACSSTALHPRPF--IHGFSFTTFLQQLFPH-----GSSTALHPWPFIHGSSPMALHPR 53
+H +HP + IH ++++ + PH ST H P IH S P ++HP
Sbjct: 21 IHPSIHPCIHPPTYSSIHPPTYSSIHPSVHPHIHPSIHPSTHPHIHPSIHPSIP-SIHPS 79
Query: 54 LFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTH 113
+ ST P TH S S+HP + H S + P +H+S + P +
Sbjct: 80 IHPSIRPSTYSSIHPSTHISIHPSIHPSIHLHIHPSTHIFIHPSIHSSIHASTHPHIH-- 137
Query: 114 GPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHP 150
PS PL P +H S TH P +HP
Sbjct: 138 -PSIYPLFIHPSIHPS----------THPPIHPQIHP 163
Score = 50.8 bits (120), Expect = 2e-06
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 204 LHPRP--FVHASSPTALPPCLFTHGPSSMPLHPRPF--VHASSPTALRPCLF--THGPSS 257
+HP F+H S ++ PC+ H P+ +HP + +H S + P + TH
Sbjct: 9 IHPSTHIFIHPSIHPSIHPCI--HPPTYSSIHPPTYSSIHPSVHPHIHPSIHPSTHPHIH 66
Query: 258 MPLHPR-PFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL 316
+HP P +H S ++RP ++ +HP H S ++ P + H S +
Sbjct: 67 PSIHPSIPSIHPSIHPSIRPSTYSS------IHPS--THISIHPSIHPSIHLHIHPSTHI 118
Query: 317 HPRPFVHASSSTSLHPR-------PFIHASSSKSLH 345
P +H+S S HP FIH S S H
Sbjct: 119 FIHPSIHSSIHASTHPHIHPSIYPLFIHPSIHPSTH 154
>gi|193788649 retinoic acid induced 2 [Homo sapiens]
Length = 530
Score = 57.0 bits (136), Expect = 3e-08
Identities = 63/206 (30%), Positives = 73/206 (35%), Gaps = 29/206 (14%)
Query: 78 LHPRLFTHSPSSMPLHPRPFVHASSPTALRP------CLFTHGPSSMP--LHPRPFVHAS 129
L P SP MP+H + V SS L P + T GP +P L F H +
Sbjct: 78 LQPLCLGESPVVMPIHMQ--VEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLN 135
Query: 130 SPTALP---PCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHA-- 184
SP LP PC SS +H F A P A P L PS PF
Sbjct: 136 SPLVLPQEAPC------SSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQ 189
Query: 185 ---SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLH-----PRP 236
S L P P P+ P+PF SP P L P +PL P P
Sbjct: 190 NLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIP 249
Query: 237 FVHASSPTALRPCLFTHGPSSMPLHP 262
S + F PSS LHP
Sbjct: 250 IPMPQSSESKFSSSFPKPPSSFGLHP 275
Score = 48.9 bits (115), Expect = 8e-06
Identities = 60/208 (28%), Positives = 71/208 (34%), Gaps = 29/208 (13%)
Query: 132 TALPPCLFTHGPSSMPLHPRPFLHASSPTALPP------CLFTHGPSSMP--LHPRPFVH 183
T L P P MP+H + + SS L P + T GP +P L F H
Sbjct: 76 TVLQPLCLGESPVVMPIHMQ--VEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQH 133
Query: 184 ASSPTAL---RPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHA 240
+SP L PC SS +H F A P A P L PS PF
Sbjct: 134 LNSPLVLPQEAPC------SSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAV 187
Query: 241 -----SSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLH-----P 290
S L P P P+ P+PF SP L P +PL P
Sbjct: 188 LQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP 247
Query: 291 RPFVHASSPTALRPCLFTHGPSSMPLHP 318
P S + F PSS LHP
Sbjct: 248 IPIPMPQSSESKFSSSFPKPPSSFGLHP 275
Score = 31.6 bits (70), Expect = 1.3
Identities = 42/149 (28%), Positives = 52/149 (34%), Gaps = 15/149 (10%)
Query: 41 FIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPR-PFVH 99
F H +SP+ L SS+ +H F P + P+L S P P PF
Sbjct: 131 FQHLNSPLVLPQEAPC---SSSTIHNNLFQGAEDPEA-QPQLLDLRIPSQPQEPTLPFEA 186
Query: 100 A-----SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLH----- 149
S L P P P+ P+PF SP P L P +PL
Sbjct: 187 VLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPI 246
Query: 150 PRPFLHASSPTALPPCLFTHGPSSMPLHP 178
P P S + F PSS LHP
Sbjct: 247 PIPIPMPQSSESKFSSSFPKPPSSFGLHP 275
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 56.6 bits (135), Expect = 4e-08
Identities = 86/307 (28%), Positives = 118/307 (38%), Gaps = 51/307 (16%)
Query: 59 PSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLH-PRPFVHASSPTALRPCLFTHGPSS 117
P S T SS +S + R SPS P P P + T L P + H P++
Sbjct: 1119 PESDTTPDLDTTPYSSTVSEYSRSPDPSPSPHPTTTPDPTMAPDPITTLNPTVTPHFPTT 1178
Query: 118 MPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLH 177
HP H PT + P++ P +PF + T +P T
Sbjct: 1179 P--HPTTTPH---PTTITHSTMIPDPTTTP---QPFTTITHSTMIPDPTTT--------- 1221
Query: 178 PRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHAS---SPTALPPCLFTHGPSSMPLHP 234
P+PF T P T P++ P HP H++ PT P T P++MP HP
Sbjct: 1222 PQPFTTMQPTTT--PHSTTPHPTTTP-HPTTITHSTMIPDPTTTPQPFTTMQPTTMP-HP 1277
Query: 235 RPFVHASSPTALRPCLFTHGPSSMPLHPR--------PFLHASSPTALRPCLFTHGPSSM 286
H PT T P++ P HP P+ + P T PSS
Sbjct: 1278 TTTPH---PTTTPHPTTTPHPTTTP-HPTMTPDPTTTPYPTTTPDPTTTPHPTTPDPSST 1333
Query: 287 PLHPRPFVHASSPTALRPCLF--THGPSSMP-LHPR-----PFVHASSST--SLHPRPFI 336
P+ S PT+L L T P+ P LHP+ P H S+S +L P P +
Sbjct: 1334 PV----ITTVSLPTSLGTELSSPTLAPTVKPSLHPQLTFTAPAPHTSTSQIPTLEPSPAL 1389
Query: 337 HASSSKS 343
+S S+S
Sbjct: 1390 ESSPSRS 1396
Score = 36.6 bits (83), Expect = 0.040
Identities = 61/256 (23%), Positives = 89/256 (34%), Gaps = 45/256 (17%)
Query: 115 PSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSP--TALPPCLFTHGPS 172
P++ L P + PP L HG + P P P P T P + GPS
Sbjct: 953 PTAGKLGPTLGAGTTRSPGSPPTLRVHGDTGSPRKPWPERRPPRPAATRTAPPTPSPGPS 1012
Query: 173 SMPLHPRPFVHASSPTALRPC------LFTHGPSSMPLHPRP--------------FVHA 212
+ P P P + + S L P + P + P P P F +
Sbjct: 1013 ASPGPPGPALTSDSSRELTPHSALTSEATSDAPDTSPPTPDPASRTNPDLILTSPDFALS 1072
Query: 213 SSPTALPPCLFTHGPSSMPLHPRPFVHASSP------TALRPC--LFTHGPSSMPLHPRP 264
+ +++ P L T PS PL P S P T+L P ++ L P
Sbjct: 1073 TPDSSVVPAL-TPEPSPTPLPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTTPDLDTTP 1131
Query: 265 FLHASSPTALRPCLFTHGPSSMP-LHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVH 323
+ S + P PS P P P + T L P + H P++ P P
Sbjct: 1132 YSSTVSEYSRSP---DPSPSPHPTTTPDPTMAPDPITTLNPTVTPHFPTT----PHP--- 1181
Query: 324 ASSSTSLHPRPFIHAS 339
+T+ HP H++
Sbjct: 1182 ---TTTPHPTTITHST 1194
>gi|239755446 PREDICTED: hypothetical protein [Homo sapiens]
Length = 394
Score = 56.6 bits (135), Expect = 4e-08
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 152 PFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFT--HGPSSMPLHP--R 207
P +H S + + P + PS P P +H+S+ ++ P + H P+ +HP
Sbjct: 114 PSIHPSINSFIHPSMH---PSIHPFIHPPTIHSSTHPSIHPSIHPSIHPPTHPSIHPSIH 170
Query: 208 PFVHASSPTALPPCLFTHGPSSMPLHPR--PFVHASSPTALRPCLFTHGPSSMPLHPRPF 265
PF+H S + P + S+ +HP P ++ S ++ P H P+HP
Sbjct: 171 PFIHPS----IHPSIHLSIHQSI-IHPLIYPLIYLSIHPSIHPSF--HASIYPPIHPS-- 221
Query: 266 LHASSPTALRPCLF--THGPSSMPLHP-RPFVHASSPTALRPCLFTHGPSSMP-LHPRPF 321
+H S+ ++ P + H P + H P VH+S +++ + PS+ P +HP
Sbjct: 222 IHLSTHLSIHPPIHPSVHSPIHLSTHSIHPSVHSSIHSSIHSSIH---PSTHPSIHP--L 276
Query: 322 VHASSSTSLHPRPFIHASSS 341
+H S S+HP F A+ S
Sbjct: 277 IHPSIHLSIHPENFYEAALS 296
Score = 54.7 bits (130), Expect = 1e-07
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 53/234 (22%)
Query: 32 SSTALHPW--PFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSS 89
S ++HP FIH S ++HP F H P+ +H TH S S+HP + H P+
Sbjct: 112 SHPSIHPSINSFIHPSMHPSIHP--FIHPPT---IHSS--THPSIHPSIHPSI--HPPTH 162
Query: 90 MPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSS 145
+HP PF+H S + P + S+ +HP P ++ S ++ P H
Sbjct: 163 PSIHPSIHPFIHPS----IHPSIHLSIHQSI-IHPLIYPLIYLSIHPSIHPSF--HASIY 215
Query: 146 MPLHPRPFLHASSPTALPPCLF--THGPSSMPLHP-RPFVHASSPTALRPCLFTHGPSSM 202
P+HP +H S+ ++ P + H P + H P VH+S +++ + PS+
Sbjct: 216 PPIHPS--IHLSTHLSIHPPIHPSVHSPIHLSTHSIHPSVHSSIHSSIHSSIH---PSTH 270
Query: 203 P-LHP--RPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHA--SSPTALRPCLF 251
P +HP P +H S +HP F A S+ + R C+F
Sbjct: 271 PSIHPLIHPSIHLS------------------IHPENFYEAALSTKSTSRMCIF 306
Score = 37.7 bits (86), Expect = 0.018
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 264 PFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVH 323
P +H S + + P + PS P P +H+S+ ++ P + P +H
Sbjct: 114 PSIHPSINSFIHPSMH---PSIHPFIHPPTIHSSTHPSIHPSI------------HPSIH 158
Query: 324 ASSSTSLHP--RPFIHASSSKSLHLRL 348
+ S+HP PFIH S S+HL +
Sbjct: 159 PPTHPSIHPSIHPFIHPSIHPSIHLSI 185
Score = 32.7 bits (73), Expect = 0.57
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 292 PFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHP--RPFIHASSSKSLH--LR 347
P +H S + + P + PS P P +H+S+ S+HP P IH + S+H +
Sbjct: 114 PSIHPSINSFIHPSMH---PSIHPFIHPPTIHSSTHPSIHPSIHPSIHPPTHPSIHPSIH 170
Query: 348 LFSHSS 353
F H S
Sbjct: 171 PFIHPS 176
>gi|239749927 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 56.6 bits (135), Expect = 4e-08
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 32 SSTALHPW--PFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSS 89
S ++HP FIH S ++HP F H P+ +H TH S S+HP + H P+
Sbjct: 12 SHPSIHPSINSFIHPSMHPSIHP--FIHPPT---IHSS--THPSIHPSIHPSI--HPPTH 62
Query: 90 MPLHP--RPFVHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTALPPCLFTHGPSS 145
+HP PF+H S + P + S+ +HP P ++ S ++ P H
Sbjct: 63 PSIHPSIHPFIHPS----IHPSIHLSIHQSI-IHPLIYPLIYLSIHPSIHPSF--HASIY 115
Query: 146 MPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPF--VHASSPTALRPCLFTHGPSSMP 203
P+HP +H S+ ++ P P+HP +H S+ ++ P + + SS+
Sbjct: 116 PPIHPS--IHLSTHLSIHP----------PIHPSVHSPIHLSTHLSIHPSVHSSIHSSI- 162
Query: 204 LHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHA--SSPTALRPCLF 251
+H S+ ++ P + H + +HP F A S+ + R C+F
Sbjct: 163 ---HSSIHPSTHPSIHPLI--HPSIHLSIHPENFYEAALSTKSTSRMCIF 207
Score = 55.5 bits (132), Expect = 8e-08
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 152 PFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFT--HGPSSMPLHP--R 207
P +H S + + P + PS P P +H+S+ ++ P + H P+ +HP
Sbjct: 14 PSIHPSINSFIHPSMH---PSIHPFIHPPTIHSSTHPSIHPSIHPSIHPPTHPSIHPSIH 70
Query: 208 PFVHASSPTALPPCLFTHGPSSMPLHPR--PFVHASSPTALRPCLFTHGPSSMPLHPRPF 265
PF+H S + P + S+ +HP P ++ S ++ P H P+HP
Sbjct: 71 PFIHPS----IHPSIHLSIHQSI-IHPLIYPLIYLSIHPSIHPSF--HASIYPPIHPS-- 121
Query: 266 LHASSPTALRPCLF--THGPSSMPLHP--RPFVHASSPTALRPCLFTHGPSSMP-LHPRP 320
+H S+ ++ P + H P + H P VH+S +++ + PS+ P +HP
Sbjct: 122 IHLSTHLSIHPPIHPSVHSPIHLSTHLSIHPSVHSSIHSSIHSSIH---PSTHPSIHP-- 176
Query: 321 FVHASSSTSLHPRPFIHASSS 341
+H S S+HP F A+ S
Sbjct: 177 LIHPSIHLSIHPENFYEAALS 197
Score = 52.8 bits (125), Expect = 5e-07
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 32/186 (17%)
Query: 180 PFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFT--HGPSSMPLHP--R 235
P +H S + + P + PS P P +H+S+ ++ P + H P+ +HP
Sbjct: 14 PSIHPSINSFIHPSMH---PSIHPFIHPPTIHSSTHPSIHPSIHPSIHPPTHPSIHPSIH 70
Query: 236 PFVHASSPTALRPCLFTHGPSSMPLHPR--PFLHASSPTALRPCLFTHGPSSMPLHPRPF 293
PF+H S + P + S+ +HP P ++ S ++ P H P+HP
Sbjct: 71 PFIHPS----IHPSIHLSIHQSI-IHPLIYPLIYLSIHPSIHPSF--HASIYPPIHPS-- 121
Query: 294 VHASSPTALRPCLF--THGP----SSMPLHP--RPFVHASSSTSLHP------RPFIHAS 339
+H S+ ++ P + H P + + +HP +H+S +S+HP P IH S
Sbjct: 122 IHLSTHLSIHPPIHPSVHSPIHLSTHLSIHPSVHSSIHSSIHSSIHPSTHPSIHPLIHPS 181
Query: 340 SSKSLH 345
S+H
Sbjct: 182 IHLSIH 187
Score = 49.3 bits (116), Expect = 6e-06
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 208 PFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFT--HGPSSMPLHP--R 263
P +H S + + P + PS P P +H+S+ ++ P + H P+ +HP
Sbjct: 14 PSIHPSINSFIHPSMH---PSIHPFIHPPTIHSSTHPSIHPSIHPSIHPPTHPSIHPSIH 70
Query: 264 PFLHASSPTALRPCLFTHGPSSMPLHPR--PFVHASSPTALRPCLFTHGPSSMPLHPRPF 321
PF+H S + P + S+ +HP P ++ S ++ P H P+HP
Sbjct: 71 PFIHPS----IHPSIHLSIHQSI-IHPLIYPLIYLSIHPSIHPSF--HASIYPPIHPS-- 121
Query: 322 VHASSSTSLHP--RPFIHASSSKSLHLRLFS--HSS 353
+H S+ S+HP P +H+ S HL + HSS
Sbjct: 122 IHLSTHLSIHPPIHPSVHSPIHLSTHLSIHPSVHSS 157
Score = 39.3 bits (90), Expect = 0.006
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 30/170 (17%)
Query: 1 MHACSSTALHP------RPFIHGFSFTTFLQQLFPHGSSTALHP--WPFIHGSSPMALHP 52
+H ++HP P IH F + + + +HP +P I+ S ++HP
Sbjct: 49 IHPSIHPSIHPPTHPSIHPSIHPFIHPSIHPSIHLSIHQSIIHPLIYPLIYLSIHPSIHP 108
Query: 53 RLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPF--VHASSPTALRPCL 110
H +HP H S+ +S+HP P+HP +H S+ ++ P +
Sbjct: 109 SF--HASIYPPIHPS--IHLSTHLSIHP----------PIHPSVHSPIHLSTHLSIHPSV 154
Query: 111 FTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPT 160
+ SS+ +H S+ ++ P + H + +HP F A+ T
Sbjct: 155 HSSIHSSI----HSSIHPSTHPSIHPLI--HPSIHLSIHPENFYEAALST 198
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 55.5 bits (132), Expect = 8e-08
Identities = 91/304 (29%), Positives = 118/304 (38%), Gaps = 45/304 (14%)
Query: 45 SSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHP-----RLFTHSP----SSMPLHPR 95
S P+ L P T+L P + SSP+++HP L +HSP SS+ + P
Sbjct: 454 SPPLQAPLSLPASPPLQTSLSPA-VSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPL 512
Query: 96 PFVHASSPTALR--PCLFTHGP-SSMP-LHPRPFVHASSPTALP---------PCLFTHG 142
+ +P +L+ P T P ++P L P P AS+P P PC
Sbjct: 513 ETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAP 572
Query: 143 PSSMPLHP--RPFLHASSPTALPPCLFT---HGPSSMPLHP--RPFVHASSPTALRPCLF 195
PS + P P A+ P PP L + G S PL P P A AL P
Sbjct: 573 PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQA 632
Query: 196 THG-PSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHAS-SPTALRPCLFTH 253
P+S PL P +P AL L P S P P P V A SP A P
Sbjct: 633 PPSPPASPPLSPLATPSPQAPNALAVHLL-QAPFSPP--PSPPVQAPFSPPASPPV---- 685
Query: 254 GPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHP--RPFVHASSPTALRPCLFTHGP 311
PS+ P P A+ P + P P+S P+ P P A P A P P
Sbjct: 686 SPSATPPSQAPPSLAAPPLQVPP----SPPASPPMSPSATPPPQAPPPLAAPPLQVPPSP 741
Query: 312 SSMP 315
+ P
Sbjct: 742 PASP 745
Score = 53.9 bits (128), Expect = 2e-07
Identities = 91/333 (27%), Positives = 121/333 (36%), Gaps = 53/333 (15%)
Query: 46 SPMALHPRLFTHGPSSTALHPC---PFTHGSSPMSLHPRLFTHSPSSMPLH--PRPFVHA 100
SP+A P P AL P P S P+S +P+++ +H PF
Sbjct: 612 SPLATPP---PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 668
Query: 101 SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTAL----------PPCLFTHGPSSMPLHP 150
SP P P+S P+ P + +P +L PP PS+ P
Sbjct: 669 PSPPVQAPF---SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 725
Query: 151 RPFLHASSPTALPPCLFTHGPSSMPLHPRPFVH---ASSPTALRPCLFTHGPSSMPLHPR 207
P A+ P +PP P S P P V A+ P + P P+S+P+ P
Sbjct: 726 APPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPP----SPPASLPMSPL 781
Query: 208 PFVHASSPTALPPCLFTHGPSSMPLHPRPFVHAS--SPTALRPC--LFTHGPSSMPLHPR 263
A P PP L T ++P P F + SP+A P L T P + P+
Sbjct: 782 ----AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 837
Query: 264 PFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSP---TALRPCLFTHGPSSMPLHPRP 320
P L P L P P P P S P AL P GP P P
Sbjct: 838 PLLQVPPSPPASPTL--QAPRRPPT-PGPDTSVSGPRLTLALAP-----GP------PPP 883
Query: 321 FVHASSSTSLHPRPFIHASSSKSLHLRLFSHSS 353
+ SST P H+SS+ S L + S
Sbjct: 884 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 916
Score = 40.8 bits (94), Expect = 0.002
Identities = 75/261 (28%), Positives = 97/261 (37%), Gaps = 41/261 (15%)
Query: 75 PMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTAL 134
P+S P L T SPS P P A P T PS P P SP+A
Sbjct: 298 PLSSSP-LATPSPSGTKARPVP----PPDNAATPLPATLPPSPPLATPLPLA-PPSPSAP 351
Query: 135 PPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHA-SSPTALRPC 193
P P + P P + P PP L T P +P H+ +SP+ P
Sbjct: 352 PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVP-------HSLTSPSLQAP- 403
Query: 194 LFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTH 253
PS + L + A++ P TH S + + PR AS + RP +
Sbjct: 404 -----PSPLALSS---LQATTSLGSPTLQATH--SFLTMSPRQ-TQASLTSPSRPA--ST 450
Query: 254 GPSSMPLHPRPFLHASSP--TALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGP 311
P S PL L AS P T+L P + P S PL P SS L +H P
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAV---SPLSSPLTIHPLQALSS-------LASHSP 500
Query: 312 SSMPLHPRPFVHASSSTSLHP 332
+ PL + +SL P
Sbjct: 501 QA-PLSSLIMPPLETQSSLAP 520
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 55.5 bits (132), Expect = 8e-08
Identities = 88/319 (27%), Positives = 106/319 (33%), Gaps = 49/319 (15%)
Query: 27 LFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHS 86
L P L P P SP P L + P L P P SP S P L
Sbjct: 788 LSPQAEGPHLSPQPEELHLSPQTEEPHL-SPVPEEPCLSPQPEESHLSPQSEEPCLSPRP 846
Query: 87 PSSM--------PLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCL 138
S PL PRP P P +PL P P + SP P L
Sbjct: 847 EESHLSPELEKPPLSPRPEKPPEEPGQCP------APEELPLFPPPGEPSLSPLLGEPAL 900
Query: 139 FTHGPSSMPLHPRPF---LHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLF 195
P PL P P L S +L P L P PL P + A++P AL P
Sbjct: 901 SE--PGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSP--IITAAAPPALSPL-- 954
Query: 196 THGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGP 255
G P + SP A P P+ P P + + P + P + P
Sbjct: 955 --GELEYPFGAKGDSDPESPLAAPIL-------ETPISPPPEANCTDPEPVPPMILPPSP 1005
Query: 256 SSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTA--LRPCLFTHGPSS 313
S P+ P +SP + P P PL V +SP + P L PS
Sbjct: 1006 GS-PVGP------ASPILMEPL----PPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPS- 1053
Query: 314 MPLHP-RPFVHASSSTSLH 331
PL P V S LH
Sbjct: 1054 -PLSPIGKVVGVSDEAELH 1071
Score = 49.7 bits (117), Expect = 5e-06
Identities = 81/309 (26%), Positives = 104/309 (33%), Gaps = 49/309 (15%)
Query: 59 PSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRP-FVHASSPTALRPCL------- 110
P + L P P +SP RL + P +P P P +H S P P
Sbjct: 444 PEESPLSPPPEESPTSPPPEASRL-SPPPEELPASPLPEALHLSRPLEESPLSPPPEESP 502
Query: 111 FTHGPSSMPLHPRPFVHASSPTALPP-----CLFTHGPSSMPLHPRPFLHA-------SS 158
+ P S P P S P PP + P + PL P PF +
Sbjct: 503 LSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSP-PFEESPLSPPPEEL 561
Query: 159 PTALPP--CLFTHGPSSMPLHPRPFVHASSPTALRPCLF--------THGPSSMPLHPRP 208
PT+ PP + P P+ P P SP LF + P PL P P
Sbjct: 562 PTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPP 621
Query: 209 FVHASSPTALPP--CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFL 266
SP PP + P P+ P P V SP + L + P PL P P
Sbjct: 622 EASRLSP---PPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRL-SPPPEESPLSPPP-- 675
Query: 267 HASSPTALRP--CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHA 324
SPT+ P + P P P P +SP + S+PL P +
Sbjct: 676 -EESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLM------SLPLEESPLLPL 728
Query: 325 SSSTSLHPR 333
L PR
Sbjct: 729 PEEPQLCPR 737
Score = 48.5 bits (114), Expect = 1e-05
Identities = 71/273 (26%), Positives = 88/273 (32%), Gaps = 41/273 (15%)
Query: 72 GSSPMSLHPRLFTHSPSSMPLHPRPFVH------ASSPTALRP--CLFTHGPSSMPLHPR 123
G + + L P+L MPL P P SPT+ P + P +P P
Sbjct: 420 GKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPL 479
Query: 124 P-FVHAS-----SPTALPP--CLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMP 175
P +H S SP + PP + P S P P S P PP P S P
Sbjct: 480 PEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPP 539
Query: 176 LHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPR 235
P + L P P +P P P SP P P+ P
Sbjct: 540 PEASPLSPPFEESPLSP-----PPEELPTSPPPEASRLSPP----------PEESPMSPP 584
Query: 236 PFVHASSPTALRPCLF--------THGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMP 287
P SP LF + P PL P P SP + P P
Sbjct: 585 PEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPP-EDSPMSPPPEESP 643
Query: 288 LHPRPFVHASSPTALRPCLFTHGPSSMPLHPRP 320
+ P P V SP + L + P PL P P
Sbjct: 644 MSPPPEVSRLSPLPVVSRL-SPPPEESPLSPPP 675
Score = 47.8 bits (112), Expect = 2e-05
Identities = 98/327 (29%), Positives = 116/327 (35%), Gaps = 81/327 (24%)
Query: 35 ALH----PWPFIHGSSPMALHPRLFTHGPSSTA---------LHPCPFTHGSSPMSLHP- 80
ALH P P GS P A P +F P++ A L P GS P P
Sbjct: 2101 ALHLRIPPQPGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKP---PAGSVPGPDSPG 2157
Query: 81 RLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFT 140
LF P +P V + P L P + PL PR PTA P
Sbjct: 2158 ELFLKLPPQVPAQ----VPSQDPFGLAP--------AYPLEPR------FPTAPPTYPPY 2199
Query: 141 HGPSSMPLHPRPFLHASS-PTALPPCLFTHGPSSMPLH----PRPFVHASSPTALRPCL- 194
P+ P P P L ASS P A P F P P H P PF+ P+ +
Sbjct: 2200 PSPTGAPAQP-PMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVP 2258
Query: 195 ----FTHGPSSMPL-HPRPF-------------VHASSPTALPPCL-FTHGPSSMPLHPR 235
G +S PL P PF + ASSP+ PP L F PSS
Sbjct: 2259 ESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSG----- 2313
Query: 236 PFVHASSPTALRPCLFTHGPSSMPLHPRPF-LHASSP-TALRPCLFTHGPSSMPLHPRPF 293
H P +F PL PR + SP LRP P + L P P
Sbjct: 2314 --THLGGLELKTPDVF-----KAPLTPRASQVEPQSPGLGLRP---QEPPPAQALAPSPP 2363
Query: 294 VHASSPTALRPCLFTHGPSSMPLHPRP 320
H P RP +T + PL PRP
Sbjct: 2364 SH---PDIFRPGSYTDPYAQPPLTPRP 2387
Score = 45.4 bits (106), Expect = 9e-05
Identities = 79/273 (28%), Positives = 96/273 (35%), Gaps = 63/273 (23%)
Query: 86 SPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLH----PRPFVHASSPT----ALP-- 135
SP+ P P +S P A +P F P P H P PF+ P+ A+P
Sbjct: 2201 SPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPES 2260
Query: 136 PCLFTHGPSSMPLHPRPF-------------LHASSPTALPPCL-FTHGPSS-------- 173
P + S L P PF L ASSP+ PP L F PSS
Sbjct: 2261 PGVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLE 2320
Query: 174 --------MPLHPRPF-VHASSP-TALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLF 223
PL PR V SP LRP P + L P P S P P +
Sbjct: 2321 LKTPDVFKAPLTPRASQVEPQSPGLGLRP---QEPPPAQALAPSP---PSHPDIFRPGSY 2374
Query: 224 THGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGP 283
T + PL PRP P C P S+P P + AS +
Sbjct: 2375 TDPYAQPPLTPRP-----QPPPPESCC-ALPPRSLPSDPFSRVPASPQ--------SQSS 2420
Query: 284 SSMPLHPRPF-VHASSPTALRPCLFTHGPSSMP 315
S PL PRP A P+ + P + P S P
Sbjct: 2421 SQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRP 2453
Score = 38.1 bits (87), Expect = 0.014
Identities = 66/252 (26%), Positives = 86/252 (34%), Gaps = 50/252 (19%)
Query: 29 PHGSSTALHPWPFIHGSSPMALHPRLFTHG--PSSTALHPCPFTHGSSPMSLHPRLFTHS 86
P L P P SP+ P L G P S P + P SL P+L
Sbjct: 875 PAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEP-SLSPQLMPPD 933
Query: 87 PSSMPLHPRPFVHASSPTALRPCLFTHGPSSM-----------------PLHPRPFVHAS 129
P PL P + A++P AL P P P+ P P + +
Sbjct: 934 PLPPPLSP--IITAAAPPALSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCT 991
Query: 130 SPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTA 189
P +PP + P S P+ P +SP + P P PL V +SP +
Sbjct: 992 DPEPVPPMILPPSPGS-PVGP------ASPILMEPL----PPQCSPLLQHSLVPQNSPPS 1040
Query: 190 LRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPS-SMPLHPRPFVHASSP--TAL 246
C P ++PL S P+ L P G S LH S P AL
Sbjct: 1041 --QC----SPPALPL--------SVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPAL 1086
Query: 247 RPCLFTHGPSSM 258
P + PS M
Sbjct: 1087 EPSATSPLPSPM 1098
Score = 35.8 bits (81), Expect = 0.068
Identities = 72/251 (28%), Positives = 87/251 (34%), Gaps = 44/251 (17%)
Query: 37 HPWPFIHGS--SPMA---LHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRL-FTHSPSSM 90
HP F GS P A L PR P S P P + S P S P + S S
Sbjct: 2365 HPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALP-PRSLPSDPFSRVPASPQSQSSSQS 2423
Query: 91 PLHPRPF-VHASSPTALRPCLFTHGPSSMP-LHPR---PF--VHASSPTALPPCLFTHG- 142
PL PRP A P+ + P + P S P P+ PF +H P F G
Sbjct: 2424 PLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGS 2483
Query: 143 -----------PSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALR 191
P+++P P LHA P+ PP F P + FV SP
Sbjct: 2484 LAHTSLGAGGFPAALPAGPAGELHAKVPSGQPP-NFVRSPGT-----GAFVGTPSPMRFT 2537
Query: 192 PCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLF 251
PS P P+P LPP HG +S P P + T
Sbjct: 2538 FPQAVGEPSLKPPVPQP--------GLPP---PHGINS-HFGPGPTLGKPQSTNYTVATG 2585
Query: 252 THGPSSMPLHP 262
PS PL P
Sbjct: 2586 NFHPSGSPLGP 2596
Score = 30.8 bits (68), Expect = 2.2
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Query: 40 PFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVH 99
P H SSP AL P L G + P + + S TH + + P
Sbjct: 4005 PLQHFSSPGALGPTLLLTGKEQNTVDPAVSSEATEGPS------THQGGPLAIGTTPESM 4058
Query: 100 ASSPTALRPCLFTHGPSSMPL-HPRPFVHASSPTALPP 136
A+ P ++P L G S + L P+P SS PP
Sbjct: 4059 ATEPGEVKPSL--SGDSQLLLVQPQPQPQPSSLQLQPP 4094
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 53.5 bits (127), Expect = 3e-07
Identities = 75/282 (26%), Positives = 101/282 (35%), Gaps = 47/282 (16%)
Query: 56 THGPSSTALHPCPFTHGSSPMSLH----PRLFTHSPSSM--------PLHPRP------F 97
TH P+ + P +P+S P T +PS + P P P
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 98 VHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHAS 157
+ +SSP R T P +P P P + P A PP P P P P +
Sbjct: 913 MTSSSPKKARA---TPAPKGIPASPSPKGAPTPPAATPP-----SPKGGPATPSPKWAPT 964
Query: 158 SPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTA 217
P A PP P P P P + P A P P P P P +PT
Sbjct: 965 PPAATPP-----SPKGGPATPSPKGAPTPPAATPP-----SPKGGPATPSP---KGAPT- 1010
Query: 218 LPPCLFTHGPSSMPLHPRPFVH-ASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRP 276
PP + P P PF AS+P A P P++ PL P ++P A P
Sbjct: 1011 -PPAVTPPSPKGSPA-ATPFPKGASTPPAATPPSPKGSPAATPL---PKGAPTTPAATLP 1065
Query: 277 CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP 318
GP++ L P A++P + + T P P+ P
Sbjct: 1066 SP-KGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPP 1106
Score = 52.4 bits (124), Expect = 7e-07
Identities = 72/274 (26%), Positives = 104/274 (37%), Gaps = 40/274 (14%)
Query: 46 SPMALHPRLFTHGPSSTALHPCPFTHGSS-PMSLHPRLFTHSPSSMPLHPRPFVHASSPT 104
+P A+ P P++T PF G+S P + P SP++ PL P ++P
Sbjct: 1010 TPPAVTPPSPKGSPAAT-----PFPKGASTPPAATPPSPKGSPAATPL---PKGAPTTPA 1061
Query: 105 ALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPP 164
A P P P P + P A PP P P P P P A PP
Sbjct: 1062 ATLP-----SPKGGPATPSLKGAPTPPAATPP-----SPKGGPATPSPKGAPMPPAATPP 1111
Query: 165 CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFT 224
G ++ P P A++P + + L T P P P A++P + L T
Sbjct: 1112 SP-KGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTP-----AATPPSPKGGLAT 1165
Query: 225 HGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPS 284
P P P A++P + + L T P P P A++P + + L T P
Sbjct: 1166 PPPKGAPTTP-----AATPPSPKGGLATPSPKGAPTTP-----AATPPSPKGGLATPSPK 1215
Query: 285 SMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP 318
P P A++P + + L T P P P
Sbjct: 1216 GAPTTP-----AATPPSPKGGLATPSPKGAPTTP 1244
Score = 47.4 bits (111), Expect = 2e-05
Identities = 70/289 (24%), Positives = 93/289 (32%), Gaps = 38/289 (13%)
Query: 59 PSSTALHP-CPFTHGSSPMSLHPRLFTHSPSSMPLHPRP--------FVHASSPTALRPC 109
P++T L P T + P + SP P P P ASSP A+ P
Sbjct: 1529 PTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPS 1588
Query: 110 LFTHGPSSMPLHPRPFVHASSP--TALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLF 167
+ PS L P V + SP PP + P P P P +SP P L
Sbjct: 1589 TYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLK 1648
Query: 168 THGPS----------SMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTA 217
S ++P + PTAL+ L P S P+ ++PT
Sbjct: 1649 DSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPI-------ITAPTR 1701
Query: 218 LPPCLFTHGPSSMPLHPRPFVHAS-----SPTALRPCLFTHGPSSMPLHPRPFLHASSPT 272
P +S P+ P P S A P L SS + H+
Sbjct: 1702 KGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGP 1761
Query: 273 ALRPCLFTHGPSSMPLHPRPFVHA-SSPTALRPCLFTHGPSSMPLHPRP 320
P +S PL F P + P S+PL P P
Sbjct: 1762 LAPP----ESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSP 1806
Score = 40.4 bits (93), Expect = 0.003
Identities = 74/330 (22%), Positives = 101/330 (30%), Gaps = 57/330 (17%)
Query: 46 SPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTA 105
+P + P GP+++ P ++P S T P P P V SP
Sbjct: 1288 NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPA--VTPPSPKG 1345
Query: 106 LRPCLFTHGPSSM--PLHPRPFVHASSPTALP-----PCLFTHGPSSMPLHPRPFLHASS 158
P L PSS P P + P A P P + P P P P +S
Sbjct: 1346 T-PTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS 1404
Query: 159 PTALP-------PCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVH 211
P +P T ++ P A +P +L+ T P P P
Sbjct: 1405 PAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGD 1464
Query: 212 ASSPTALPPC----------LFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLH 261
+ P PP + P P P P +PT P + P +P
Sbjct: 1465 PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM---GAPTL--PAVIPSSPKEVPAT 1519
Query: 262 PRPFLHASSPTA-----------------LRPCLFTHGPSSMPLHPRP--------FVHA 296
P +PTA + P + P P P P A
Sbjct: 1520 PSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEA 1579
Query: 297 SSPTALRPCLFTHGPSSMPLHPRPFVHASS 326
SSP A+ P + PS L P V + S
Sbjct: 1580 SSPPAVTPSTYKGAPSPKELLIPPAVTSPS 1609
Score = 29.3 bits (64), Expect = 6.3
Identities = 48/169 (28%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 143 PSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSM 202
P S L L PT PPC + P PL S+ P +S
Sbjct: 27 PMSSALSVTAALGQPGPTLPPPC--SPAPQQCPL--------SAANQASPFPSPSTIAST 76
Query: 203 PLHPRPFVHASSPTALPPCLFTHGPSSMP--LHP--RPFVHASSPTALRPCLFTHGPSSM 258
PL PF +SS TALP P+ +P + P P A + + P L SS
Sbjct: 77 PLEV-PFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSA 135
Query: 259 PLHPRPFLHASSP------TALRPCLFTHGPSSMPLHPRPFVHASSPTA 301
PL L A +P +A P L T PS + S+P A
Sbjct: 136 PL----ALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIA 180
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 53.1 bits (126), Expect = 4e-07
Identities = 96/345 (27%), Positives = 116/345 (33%), Gaps = 42/345 (12%)
Query: 29 PHGSSTALHPWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHG-SSPMSLHPRLFTHSP 87
PH SS + + P P PS A P T SP F SP
Sbjct: 325 PHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP 384
Query: 88 SSMPLHPRPFVHASSPTALRPCLFTHGP-SSMPLHPRPFVHASSPTAL-----------P 135
PL P A AL P P +S PL P +P AL P
Sbjct: 385 PLSPLATPP-PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 443
Query: 136 PCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLF 195
P P S P P A+ P+ PP L ++ PL P AS P + P
Sbjct: 444 PSPPVQAPFSPPASPPVSPSATPPSQAPPSL-----AAPPLQVPPSPPASPP--MSPSAT 496
Query: 196 THGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHAS--SPTALRPC--LF 251
+ PL P A P PP L T ++P P F + SP+A P L
Sbjct: 497 PPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 556
Query: 252 THGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSP---TALRPCLFT 308
T P + P+ P L P L P P P P S P AL P
Sbjct: 557 TPPPQAPPVLAAPLLQVPPSPPASPTL--QAPRRPPT-PGPDTSVSGPRLTLALAP---- 609
Query: 309 HGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKSLHLRLFSHSS 353
GP P P + SST P H+SS+ S L + S
Sbjct: 610 -GP------PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 647
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 53.1 bits (126), Expect = 4e-07
Identities = 85/303 (28%), Positives = 101/303 (33%), Gaps = 49/303 (16%)
Query: 52 PRLFTHGP--SSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPC 109
P+L T GP S+TA+ P GS S P + P P P H AL P
Sbjct: 205 PQLPTPGPTPSATAVPP----QGSPTASQAP-----NQPQAPTAPVPHTHIQQAPALHP- 254
Query: 110 LFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTH 169
P P P H S L P + G S P H +P LH P P
Sbjct: 255 -------QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG--PHSLQA 305
Query: 170 GP-SSMPLHPRPF------VHASSPTALRP-CLFTHGPSSMPLHPRPFVHASSP--TALP 219
GP P P+PF +P P + H +P P LP
Sbjct: 306 GPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLP 365
Query: 220 PCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF---LHASSPTALRP 276
P P +MP H +P P P H P P PF + P AL+P
Sbjct: 366 P-----APLAMP-HIKPPPTTPIPQLPAPQAHKHPPHLS--GPSPFSMNANLPPPPALKP 417
Query: 277 --CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLH--- 331
L TH P S P + S P P S L P P H T LH
Sbjct: 418 LSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVA 475
Query: 332 PRP 334
P+P
Sbjct: 476 PQP 478
Score = 42.4 bits (98), Expect = 7e-04
Identities = 74/286 (25%), Positives = 87/286 (30%), Gaps = 45/286 (15%)
Query: 38 PWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPL--HPR 95
P P H S L P + G S H P HG P HS + PL HP
Sbjct: 260 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG------PHSLQAGPLLQHPG 313
Query: 96 PFVHASSPTALRPCLFTHGPSSMPLHPR---PFVHASSPTALPPCLFTHGPSSMPLHPRP 152
P P L P + G + + P P P + P PL P P
Sbjct: 314 P----PQPFGLPP-QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP 368
Query: 153 FLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHA 212
+ P PP + +P P P H P P F+ + P
Sbjct: 369 L---AMPHIKPP-----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP--------- 411
Query: 213 SSPTALPP--CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASS 270
P AL P L TH P S P + S P P S L P P H
Sbjct: 412 --PPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--P 467
Query: 271 PTALRPCLFTHGPSSMPLHPRPFVHASSPTALRP-CLFTHGPSSMP 315
PT L P PFV P P C T P + P
Sbjct: 468 PTGLHQV-----APQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGP 508
Score = 40.4 bits (93), Expect = 0.003
Identities = 42/149 (28%), Positives = 46/149 (30%), Gaps = 19/149 (12%)
Query: 154 LHASSPTALPPCLFTHGPSSMPLH--------PRPFVHASSPTALRPCLFTHGPSSMPLH 205
L A P P T PSS P P P A P P
Sbjct: 180 LQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTA 239
Query: 206 PRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF 265
P P H AL P P P P H S L+P + G S P H +P
Sbjct: 240 PVPHTHIQQAPALHP--------QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPP 291
Query: 266 LHASSPTALRPCLFTHGP-SSMPLHPRPF 293
LH P P GP P P+PF
Sbjct: 292 LHGQGPPG--PHSLQAGPLLQHPGPPQPF 318
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 53.1 bits (126), Expect = 4e-07
Identities = 85/303 (28%), Positives = 101/303 (33%), Gaps = 49/303 (16%)
Query: 52 PRLFTHGP--SSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPC 109
P+L T GP S+TA+ P GS S P + P P P H AL P
Sbjct: 759 PQLPTPGPTPSATAVPP----QGSPTASQAP-----NQPQAPTAPVPHTHIQQAPALHP- 808
Query: 110 LFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTH 169
P P P H S L P + G S P H +P LH P P
Sbjct: 809 -------QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG--PHSLQA 859
Query: 170 GP-SSMPLHPRPF------VHASSPTALRP-CLFTHGPSSMPLHPRPFVHASSP--TALP 219
GP P P+PF +P P + H +P P LP
Sbjct: 860 GPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLP 919
Query: 220 PCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF---LHASSPTALRP 276
P P +MP H +P P P H P P PF + P AL+P
Sbjct: 920 P-----APLAMP-HIKPPPTTPIPQLPAPQAHKHPPHLS--GPSPFSMNANLPPPPALKP 971
Query: 277 --CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLH--- 331
L TH P S P + S P P S L P P H T LH
Sbjct: 972 LSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVA 1029
Query: 332 PRP 334
P+P
Sbjct: 1030 PQP 1032
Score = 42.4 bits (98), Expect = 7e-04
Identities = 74/286 (25%), Positives = 87/286 (30%), Gaps = 45/286 (15%)
Query: 38 PWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPL--HPR 95
P P H S L P + G S H P HG P HS + PL HP
Sbjct: 814 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG------PHSLQAGPLLQHPG 867
Query: 96 PFVHASSPTALRPCLFTHGPSSMPLHPR---PFVHASSPTALPPCLFTHGPSSMPLHPRP 152
P P L P + G + + P P P + P PL P P
Sbjct: 868 P----PQPFGLPP-QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP 922
Query: 153 FLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHA 212
+ P PP + +P P P H P P F+ + P
Sbjct: 923 L---AMPHIKPP-----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP--------- 965
Query: 213 SSPTALPP--CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASS 270
P AL P L TH P S P + S P P S L P P H
Sbjct: 966 --PPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--P 1021
Query: 271 PTALRPCLFTHGPSSMPLHPRPFVHASSPTALRP-CLFTHGPSSMP 315
PT L P PFV P P C T P + P
Sbjct: 1022 PTGLHQV-----APQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGP 1062
Score = 40.4 bits (93), Expect = 0.003
Identities = 42/149 (28%), Positives = 46/149 (30%), Gaps = 19/149 (12%)
Query: 154 LHASSPTALPPCLFTHGPSSMPLH--------PRPFVHASSPTALRPCLFTHGPSSMPLH 205
L A P P T PSS P P P A P P
Sbjct: 734 LQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTA 793
Query: 206 PRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF 265
P P H AL P P P P H S L+P + G S P H +P
Sbjct: 794 PVPHTHIQQAPALHP--------QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPP 845
Query: 266 LHASSPTALRPCLFTHGP-SSMPLHPRPF 293
LH P P GP P P+PF
Sbjct: 846 LHGQGPPG--PHSLQAGPLLQHPGPPQPF 872
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 53.1 bits (126), Expect = 4e-07
Identities = 85/303 (28%), Positives = 101/303 (33%), Gaps = 49/303 (16%)
Query: 52 PRLFTHGP--SSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPC 109
P+L T GP S+TA+ P GS S P + P P P H AL P
Sbjct: 759 PQLPTPGPTPSATAVPP----QGSPTASQAP-----NQPQAPTAPVPHTHIQQAPALHP- 808
Query: 110 LFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTH 169
P P P H S L P + G S P H +P LH P P
Sbjct: 809 -------QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG--PHSLQA 859
Query: 170 GP-SSMPLHPRPF------VHASSPTALRP-CLFTHGPSSMPLHPRPFVHASSP--TALP 219
GP P P+PF +P P + H +P P LP
Sbjct: 860 GPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLP 919
Query: 220 PCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF---LHASSPTALRP 276
P P +MP H +P P P H P P PF + P AL+P
Sbjct: 920 P-----APLAMP-HIKPPPTTPIPQLPAPQAHKHPPHLS--GPSPFSMNANLPPPPALKP 971
Query: 277 --CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLH--- 331
L TH P S P + S P P S L P P H T LH
Sbjct: 972 LSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVA 1029
Query: 332 PRP 334
P+P
Sbjct: 1030 PQP 1032
Score = 42.4 bits (98), Expect = 7e-04
Identities = 74/286 (25%), Positives = 87/286 (30%), Gaps = 45/286 (15%)
Query: 38 PWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPL--HPR 95
P P H S L P + G S H P HG P HS + PL HP
Sbjct: 814 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPG------PHSLQAGPLLQHPG 867
Query: 96 PFVHASSPTALRPCLFTHGPSSMPLHPR---PFVHASSPTALPPCLFTHGPSSMPLHPRP 152
P P L P + G + + P P P + P PL P P
Sbjct: 868 P----PQPFGLPP-QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP 922
Query: 153 FLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHA 212
+ P PP + +P P P H P P F+ + P
Sbjct: 923 L---AMPHIKPP-----PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPP--------- 965
Query: 213 SSPTALPP--CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASS 270
P AL P L TH P S P + S P P S L P P H
Sbjct: 966 --PPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--P 1021
Query: 271 PTALRPCLFTHGPSSMPLHPRPFVHASSPTALRP-CLFTHGPSSMP 315
PT L P PFV P P C T P + P
Sbjct: 1022 PTGLHQV-----APQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGP 1062
Score = 40.4 bits (93), Expect = 0.003
Identities = 42/149 (28%), Positives = 46/149 (30%), Gaps = 19/149 (12%)
Query: 154 LHASSPTALPPCLFTHGPSSMPLH--------PRPFVHASSPTALRPCLFTHGPSSMPLH 205
L A P P T PSS P P P A P P
Sbjct: 734 LQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTA 793
Query: 206 PRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPF 265
P P H AL P P P P H S L+P + G S P H +P
Sbjct: 794 PVPHTHIQQAPALHP--------QRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPP 845
Query: 266 LHASSPTALRPCLFTHGP-SSMPLHPRPF 293
LH P P GP P P+PF
Sbjct: 846 LHGQGPPG--PHSLQAGPLLQHPGPPQPF 872
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 52.8 bits (125), Expect = 5e-07
Identities = 98/347 (28%), Positives = 117/347 (33%), Gaps = 45/347 (12%)
Query: 27 LFPHGSSTALHPWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHG-SSPMSLHPRLFTH 85
L P SS P P + P P PS A P T SP F
Sbjct: 287 LGPLSSSPLATPSP---SAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP 343
Query: 86 SPSSMPLHPRPFVHASSPTALRPCLFTHGP-SSMPLHPRPFVHASSPTAL---------- 134
SP PL P A AL P P +S PL P +P AL
Sbjct: 344 SPPLSPLATPP-PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS 402
Query: 135 -PPCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPC 193
PP P S P P A+ P+ PP L ++ PL P AS P + P
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL-----AAPPLQVPPSPPASPP--MSPS 455
Query: 194 LFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHAS--SPTALRPC-- 249
+ PL P A P PP L T ++P P F + SP+A P
Sbjct: 456 ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 515
Query: 250 LFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSP---TALRPCL 306
L T P + P+ P L P L P P P P S P AL P
Sbjct: 516 LATPPPQAPPVLAAPLLQVPPSPPASPTL--QAPRRPPT-PGPDTSVSGPRLTLALAP-- 570
Query: 307 FTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKSLHLRLFSHSS 353
GP P P + SST P H+SS+ S L + S
Sbjct: 571 ---GP------PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 608
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.4 bits (124), Expect = 7e-07
Identities = 75/298 (25%), Positives = 116/298 (38%), Gaps = 48/298 (16%)
Query: 51 HPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCL 110
HP+L+ G P G S P+ HP P ++P ++
Sbjct: 216 HPQLYPGGTGGVLSGPPMGPKGGGAASS-----VGGPNGGKQHPPP----TTPISVSSSG 266
Query: 111 FTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHP--RPFLHASSPTALPPCLFT 168
+ P + P P + P+A PP F H ++P P RP +AS A PP L
Sbjct: 267 ASGAPPTKP-PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNAS---ASPPGL-- 320
Query: 169 HGPSSMPLH-PRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGP 227
G +P H P P L P GP P A SP +LPP
Sbjct: 321 -GAQPLPGHLPSPHAMGQGMGGLPP-----GPEKGP------TLAPSPHSLPPA-----S 363
Query: 228 SSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHA--SSPTALRPCLFTHGPSS 285
SS P P F ++SS ++ + SS P P A S P + P P+S
Sbjct: 364 SSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP------PTS 417
Query: 286 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKS 343
+ + +P + + P+ +++ GP P P+ ++++ HP PF ++ ++S
Sbjct: 418 LSVSNQPPKY-TQPSLPSQAVWSQGPPPPP----PYGRLLANSNAHPGPFPPSTGAQS 470
Score = 41.6 bits (96), Expect = 0.001
Identities = 72/273 (26%), Positives = 99/273 (36%), Gaps = 55/273 (20%)
Query: 91 PLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTAL-----PPC--LFTHGP 143
P HP P P + +P T P P V +PT PP +F P
Sbjct: 158 PYHPPPLF----PPSPQPPDSTPRQPEASFEPHPSV---TPTGYHAPMEPPTSRMFQAPP 210
Query: 144 SSMPLHPRPFLHASSPTALPPCL---------FTHGPSSMPLHPRPFVHASSPTALRPCL 194
+ P HP+ + + P + GP+ HP P ++P ++
Sbjct: 211 GAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPP----TTPISVSSSG 266
Query: 195 FTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHP--RPFVHAS-SPTALRPCLF 251
+ P + P P + P+A PP F H ++P P RP +AS SP L
Sbjct: 267 ASGAPPTKP-PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGL----- 320
Query: 252 THGPSSMPLH-PRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHG 310
G +P H P P L P GP P A SP +L P
Sbjct: 321 --GAQPLPGHLPSPHAMGQGMGGLPP-----GPEKGP------TLAPSPHSLPPA----- 362
Query: 311 PSSMPLHPRPFVHASSSTSLHPRPFIHASSSKS 343
SS P P F ++SSS+S +SSS S
Sbjct: 363 SSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSS 395
Score = 40.0 bits (92), Expect = 0.004
Identities = 71/262 (27%), Positives = 95/262 (36%), Gaps = 42/262 (16%)
Query: 112 THGPSSMPLHPRPFVHASSPTALPPCLFTHGP-SSMPLHPRPFLHASSPTALPPC--LFT 168
+ GP+ P HP P P+ PP P +S HP PP +F
Sbjct: 152 SQGPAR-PYHPPPLF---PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQ 207
Query: 169 HGPSSMPLHPRPFVHASSPTALRPCL---------FTHGPSSMPLHPRPF----VHASSP 215
P + P HP+ + + P + GP+ HP P V +S
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 216 TALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFLHAS-SPT 272
+ PP T P++ P + P+A P F H ++P P RP +AS SP
Sbjct: 268 SGAPP---TKPPTT------PVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPP 318
Query: 273 ALRPCLFTHGPSSMPLH-PRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLH 331
L G +P H P P L P GP+ P P ASSS
Sbjct: 319 GL-------GAQPLPGHLPSPHAMGQGMGGLPPGP-EKGPTLAP-SPHSLPPASSSAPAP 369
Query: 332 PRPFIHASSSKSLHLRLFSHSS 353
P F ++SSS S S SS
Sbjct: 370 PMRFPYSSSSSSSAAASSSSSS 391
Score = 39.3 bits (90), Expect = 0.006
Identities = 68/240 (28%), Positives = 86/240 (35%), Gaps = 40/240 (16%)
Query: 25 QQLFPHGSSTALHPWPFIH---GSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPR 81
QQ HG+S P F H G S HP + PS +L P P P
Sbjct: 499 QQQQHHGNSGPPPPGAFPHPLEGGSSHHAHP--YAMSPSLGSLRPYPPGPAHLPPPHSQV 556
Query: 82 LFTHS-PSSMPLHPRPFVHASSPTALRPCLF---THGPSSMP--LHPRPFVHASSPTALP 135
++ + P+ P+ +S+ PC + GP P P P V SS T L
Sbjct: 557 SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSAT-LS 615
Query: 136 PCLFTHGPS------SMPLHPRPF-LHASSP----TALPPCLFTHGPSSMPLHPRPFVHA 184
+ T S + P P P+ A SP TA PP P S P
Sbjct: 616 TVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRG 675
Query: 185 SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMP-LHPRPFVHASSP 243
+SP A GP + +P P LPP GPS +P L P P AS P
Sbjct: 676 TSPPA--------GPGTF----KPGSPTVGPGPLPPA----GPSGLPSLPPPPAAPASGP 719
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.4 bits (124), Expect = 7e-07
Identities = 75/298 (25%), Positives = 116/298 (38%), Gaps = 48/298 (16%)
Query: 51 HPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCL 110
HP+L+ G P G S P+ HP P ++P ++
Sbjct: 216 HPQLYPGGTGGVLSGPPMGPKGGGAASS-----VGGPNGGKQHPPP----TTPISVSSSG 266
Query: 111 FTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHP--RPFLHASSPTALPPCLFT 168
+ P + P P + P+A PP F H ++P P RP +AS A PP L
Sbjct: 267 ASGAPPTKP-PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNAS---ASPPGL-- 320
Query: 169 HGPSSMPLH-PRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGP 227
G +P H P P L P GP P A SP +LPP
Sbjct: 321 -GAQPLPGHLPSPHAMGQGMGGLPP-----GPEKGP------TLAPSPHSLPPA-----S 363
Query: 228 SSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHA--SSPTALRPCLFTHGPSS 285
SS P P F ++SS ++ + SS P P A S P + P P+S
Sbjct: 364 SSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP------PTS 417
Query: 286 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFIHASSSKS 343
+ + +P + + P+ +++ GP P P+ ++++ HP PF ++ ++S
Sbjct: 418 LSVSNQPPKY-TQPSLPSQAVWSQGPPPPP----PYGRLLANSNAHPGPFPPSTGAQS 470
Score = 41.6 bits (96), Expect = 0.001
Identities = 72/273 (26%), Positives = 99/273 (36%), Gaps = 55/273 (20%)
Query: 91 PLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTAL-----PPC--LFTHGP 143
P HP P P + +P T P P V +PT PP +F P
Sbjct: 158 PYHPPPLF----PPSPQPPDSTPRQPEASFEPHPSV---TPTGYHAPMEPPTSRMFQAPP 210
Query: 144 SSMPLHPRPFLHASSPTALPPCL---------FTHGPSSMPLHPRPFVHASSPTALRPCL 194
+ P HP+ + + P + GP+ HP P ++P ++
Sbjct: 211 GAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPP----TTPISVSSSG 266
Query: 195 FTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHP--RPFVHAS-SPTALRPCLF 251
+ P + P P + P+A PP F H ++P P RP +AS SP L
Sbjct: 267 ASGAPPTKP-PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGL----- 320
Query: 252 THGPSSMPLH-PRPFLHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHG 310
G +P H P P L P GP P A SP +L P
Sbjct: 321 --GAQPLPGHLPSPHAMGQGMGGLPP-----GPEKGP------TLAPSPHSLPPA----- 362
Query: 311 PSSMPLHPRPFVHASSSTSLHPRPFIHASSSKS 343
SS P P F ++SSS+S +SSS S
Sbjct: 363 SSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSS 395
Score = 40.0 bits (92), Expect = 0.004
Identities = 71/262 (27%), Positives = 95/262 (36%), Gaps = 42/262 (16%)
Query: 112 THGPSSMPLHPRPFVHASSPTALPPCLFTHGP-SSMPLHPRPFLHASSPTALPPC--LFT 168
+ GP+ P HP P P+ PP P +S HP PP +F
Sbjct: 152 SQGPAR-PYHPPPLF---PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQ 207
Query: 169 HGPSSMPLHPRPFVHASSPTALRPCL---------FTHGPSSMPLHPRPF----VHASSP 215
P + P HP+ + + P + GP+ HP P V +S
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 216 TALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHP--RPFLHAS-SPT 272
+ PP T P++ P + P+A P F H ++P P RP +AS SP
Sbjct: 268 SGAPP---TKPPTT------PVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPP 318
Query: 273 ALRPCLFTHGPSSMPLH-PRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLH 331
L G +P H P P L P GP+ P P ASSS
Sbjct: 319 GL-------GAQPLPGHLPSPHAMGQGMGGLPPGP-EKGPTLAP-SPHSLPPASSSAPAP 369
Query: 332 PRPFIHASSSKSLHLRLFSHSS 353
P F ++SSS S S SS
Sbjct: 370 PMRFPYSSSSSSSAAASSSSSS 391
Score = 39.3 bits (90), Expect = 0.006
Identities = 68/240 (28%), Positives = 86/240 (35%), Gaps = 40/240 (16%)
Query: 25 QQLFPHGSSTALHPWPFIH---GSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPR 81
QQ HG+S P F H G S HP + PS +L P P P
Sbjct: 499 QQQQHHGNSGPPPPGAFPHPLEGGSSHHAHP--YAMSPSLGSLRPYPPGPAHLPPPHSQV 556
Query: 82 LFTHS-PSSMPLHPRPFVHASSPTALRPCLF---THGPSSMP--LHPRPFVHASSPTALP 135
++ + P+ P+ +S+ PC + GP P P P V SS T L
Sbjct: 557 SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSAT-LS 615
Query: 136 PCLFTHGPS------SMPLHPRPF-LHASSP----TALPPCLFTHGPSSMPLHPRPFVHA 184
+ T S + P P P+ A SP TA PP P S P
Sbjct: 616 TVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRG 675
Query: 185 SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMP-LHPRPFVHASSP 243
+SP A GP + +P P LPP GPS +P L P P AS P
Sbjct: 676 TSPPA--------GPGTF----KPGSPTVGPGPLPPA----GPSGLPSLPPPPAAPASGP 719
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 50.4 bits (119), Expect = 3e-06
Identities = 78/314 (24%), Positives = 111/314 (35%), Gaps = 34/314 (10%)
Query: 45 SSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPT 104
+SP H + GP+ T L P S+ +L P L S PRP A+ P+
Sbjct: 303 TSPTNPHQHMAVGGPAQTPLLPAKL---SASNALDPML-PASVGGSTRTPRPA--AAQPS 356
Query: 105 ALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHASSPTALPP 164
+ T P S+P P + P P PSS P PT+ P
Sbjct: 357 --QKITATKIPKSLPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRPV 414
Query: 165 CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPL------HPRPFVHASSPTAL 218
P+ P+ P + P + RP T S P+ + HAS P +
Sbjct: 415 PARVSRPAEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASA 474
Query: 219 PPCLFTHGP------SSMPLHPRPFVHASSP--TALRPCLFTHGPSSMPLHPRPFLHASS 270
TH P SS P ++ P T + P T P + P P P S+
Sbjct: 475 RTS--THKPPPFTALSSSPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAVPTP---GSA 529
Query: 271 PTALRPCLFTH-----GPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHAS 325
PT + + + GP S P P P + + T PS P P+P +
Sbjct: 530 PTGSKKPIGSEASKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTRPS--PRQPQPSQQTT 587
Query: 326 SSTSLHPRPFIHAS 339
+ L P F+ +S
Sbjct: 588 PALVLAPAQFLSSS 601
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 49.7 bits (117), Expect = 5e-06
Identities = 68/314 (21%), Positives = 114/314 (36%), Gaps = 17/314 (5%)
Query: 40 PFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVH 99
P SP P+ ++ P+S + P ++ + + P ++SP+S P +
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1657
Query: 100 ASSPTALRPCLFTHGPSSMPLHPR-PFVHASSPTALP--PCLFTHGPSSMPLHPR----- 151
+ + + P ++ P+S P P +SP+ P P PS P P
Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717
Query: 152 PFLHASSPTALP--PCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPR-- 207
P +SP+ P P PS P P + + T P PS P P
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 208 PFVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLH 267
P SPT+ P PS P P ++ S P T+ PSS P +
Sbjct: 1778 PTSPNYSPTS--PSYSPTSPSYSPTSPS---YSPSSPRYTPQSPTYTPSSPSYSPSSPSY 1832
Query: 268 ASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSS 327
+ + P ++ PSS P ++ + P + P+S P ++ +S
Sbjct: 1833 SPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1892
Query: 328 TSLHPRPFIHASSS 341
+ P ++ +S
Sbjct: 1893 PTYSPTSPVYTPTS 1906
Score = 49.3 bits (116), Expect = 6e-06
Identities = 72/290 (24%), Positives = 107/290 (36%), Gaps = 28/290 (9%)
Query: 57 HGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGPS 116
+ P+S + P ++ + S P ++SP+S P ++ + + P ++ P+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 117 SMPLHP-RPFVHASSPTALP--PCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSS 173
S P P +SP+ P P PS P P + SPT+ P P+
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-----SYSPTS--PSYSPTSPNY 1748
Query: 174 MPLHPR--PFVHASSPTALRPCLFTHGPSSMPLHPR--PFVHASSPTALPPCLFTHGPSS 229
P P P + SPT+ P P+ P P P + SPT+ P PS
Sbjct: 1749 SPTSPNYTPTSPSYSPTS--PSYSPTSPNYTPTSPNYSPTSPSYSPTS--PSYSPTSPSY 1804
Query: 230 MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPR-----PFLHASSP--TALRPCLFTHG 282
P PR + + T P PS P P+ P SSP T P
Sbjct: 1805 SPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1864
Query: 283 PSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHP 332
P P P+ +SPT P + P+S P V+ +S P
Sbjct: 1865 PKYSPTSPK--YSPTSPT-YSPTTPKYSPTSPTYSPTSPVYTPTSPKYSP 1911
Score = 49.3 bits (116), Expect = 6e-06
Identities = 73/308 (23%), Positives = 116/308 (37%), Gaps = 28/308 (9%)
Query: 56 THGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGP 115
++ P+S + P ++ + S P ++SP+S P ++ + + P ++ P
Sbjct: 1663 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Query: 116 SSMPLHP-RPFVHASSPTALPPCLFTHGPSSMPLHPR--PFLHASSPTALPPCLFTHGPS 172
+S P P +SP+ P P+ P P P + SPT+ P P+
Sbjct: 1723 TSPSYSPTSPSYSPTSPSYSPT-----SPNYSPTSPNYTPTSPSYSPTS--PSYSPTSPN 1775
Query: 173 SMPLHPR--PFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSM 230
P P P + SPT+ P PS P PR + + T P PS
Sbjct: 1776 YTPTSPNYSPTSPSYSPTS--PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYS 1833
Query: 231 PLHPR-----PFVHASSP--TALRPCLFTHGPSSMPLHPR--PFLHASSPTALR--PCLF 279
P P+ P SSP T P P P P+ P SPT + P
Sbjct: 1834 PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1893
Query: 280 THGPSSMPLHP-RPFVHASSPT--ALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFI 336
T+ P+S P P +SPT P P+ P P+ ++ +S P
Sbjct: 1894 TYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPT 1953
Query: 337 HASSSKSL 344
++ +S ++
Sbjct: 1954 YSLTSPAI 1961
Score = 46.6 bits (109), Expect = 4e-05
Identities = 66/289 (22%), Positives = 107/289 (37%), Gaps = 17/289 (5%)
Query: 56 THGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLFTHGP 115
++ P+S + P ++ + S P ++SP+S P ++ + + P ++ P
Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708
Query: 116 SSMPLHPR-PFVHASSPTALP--PCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPS 172
+S P P +SP+ P P PS P P + + T P PS
Sbjct: 1709 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPS 1768
Query: 173 SMPLHPR--PFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSM 230
P P P SPT+ P PS P P ++ S P T+ PSS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTS--PSYSPTSPSYSPTSPS---YSPSSPRYTPQSPTYTPSSP 1823
Query: 231 PLHP-RPFVHASSP--TALRPCLFTHGPSSMPLHPR--PFLHASSPTALR--PCLFTHGP 283
P P +SP T P P P P+ P SPT+ + P T+ P
Sbjct: 1824 SYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Query: 284 SSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHP 332
++ P ++ + P + P+S P ++ +S + P
Sbjct: 1884 TTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 41.2 bits (95), Expect = 0.002
Identities = 81/325 (24%), Positives = 124/325 (38%), Gaps = 32/325 (9%)
Query: 31 GSSTALHPWPFIHGSSPM--ALHPRLFTH-GPSSTALHPCPFTHGSSPMSLHPRLFTHSP 87
G S A+ PW G++P A P + + P + P + S + ++ +P
Sbjct: 1512 GISPAMTPWN--QGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTP 1569
Query: 88 SS--MPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHAS---SPTALPPCLFTHG 142
S P P++ S A+ P P+ P P + S SPT+ P
Sbjct: 1570 GSPGSPGPSSPYI-PSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTS--PSYSPTS 1626
Query: 143 PSSMPLHPR--PFLHASSPTA--LPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHG 198
PS P P P + SPT+ P ++ P+S P ++ + + P ++
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 199 PSSMPLHP-RPFVHASSPTALP--PCLFTHGPSSMPLHP--RPFVHASSPTALRPCLFTH 253
P+S P P +SP+ P P PS P P P + SPT+ P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS--PSYSPT 1744
Query: 254 GPSSMPLHPR--PFLHASSPTALRPCLFTHGPSSMPLHPR--PFVHASSPT--ALRPCLF 307
P+ P P P + SPT+ P P+ P P P + SPT + P
Sbjct: 1745 SPNYSPTSPNYTPTSPSYSPTS--PSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Query: 308 THGPSSMPLHPRPFVHASSSTSLHP 332
++ PSS P+ + SS S P
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSP 1827
Score = 32.3 bits (72), Expect = 0.75
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 10/151 (6%)
Query: 52 PRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPFVHASSPTALRPCLF 111
P+ T+ PSS + P ++ + P ++SPSS P ++ + P
Sbjct: 1813 PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Query: 112 THGPSSMPLHP-RPFVHASSPTALP--PCLFTHGPSSMPLHP-----RPFLHASSPTALP 163
+ P+S P P +SPT P P P P P P +SPT P
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 164 --PCLFTHGPSSMPLHPRPFVHASSPTALRP 192
P T+ P+S P ++ + A+ P
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
Score = 30.4 bits (67), Expect = 2.8
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 5/187 (2%)
Query: 158 SPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPR-PFVHASSPT 216
SP P T G P P++ S A+ P ++ P+S PR P +
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYI-PSPGGAMSP---SYSPTSPAYEPRSPGGYTPQSP 1613
Query: 217 ALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRP 276
+ P ++ P+S P ++ + + P ++ P+S P ++ + + P
Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673
Query: 277 CLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSSTSLHPRPFI 336
++ P+S P ++ + + P ++ P+S P ++ +S S P
Sbjct: 1674 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1733
Query: 337 HASSSKS 343
++ +S S
Sbjct: 1734 YSPTSPS 1740
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 48.9 bits (115), Expect = 8e-06
Identities = 66/262 (25%), Positives = 92/262 (35%), Gaps = 57/262 (21%)
Query: 38 PWPFIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPRPF 97
P P +HG+ P + P G +P+ + P + P P P
Sbjct: 280 PPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSP--------TPPPPPPPL 331
Query: 98 VHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFLHAS 157
A S ++LR + + P +P P P A A+PP P+ + + P LH +
Sbjct: 332 PSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPP-----PPAPLQIAP-GVLHPA 385
Query: 158 SPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFVHASSPTA 217
P PP + P P V ++P ++P+HP P
Sbjct: 386 PPPIAPPL----------VQPSPPVARAAPVC----------ETVPVHPLP---QGEVQG 422
Query: 218 LPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPC 277
LPP P P P P + SSP + H PS LHP P TA P
Sbjct: 423 LPP------PPPPPPLPPPGIRPSSPVTV--TALAHPPSG--LHPTP------STAPGP- 465
Query: 278 LFTHGPSSMPLHPRPFVHASSP 299
H P P P + AS P
Sbjct: 466 ---HVPLMPPSPPSQVIPASEP 484
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.136 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,884,504
Number of Sequences: 37866
Number of extensions: 1609745
Number of successful extensions: 8886
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 349
Number of HSP's that attempted gapping in prelim test: 6043
Number of HSP's gapped (non-prelim): 1576
length of query: 389
length of database: 18,247,518
effective HSP length: 104
effective length of query: 285
effective length of database: 14,309,454
effective search space: 4078194390
effective search space used: 4078194390
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.