SBSN 26933

Name: SBSN	Sequence: fasta or formatted (247aa)		NCBI GI: 38348366
Description: suprabasin		Referenced in: Skin and Related Tissues
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.0 32 2 C cysteine 0.4 1 1 D aspartate 2.8 7 2 E glutamate 6.9 17 1 F phenylalanine 1.2 3 1 G glycine 15.4 38 2 H histidine 6.1 15 2 I isoleucine 3.6 9 1 K lysine 6.5 16 1 L leucine 8.9 22 5 M methionine 1.6 4 1 N asparagine 7.7 19 2 P proline 2.0 5 1 Q glutamine 5.7 14 1 R arginine 2.0 5 1 S serine 6.5 16 3 T threonine 2.8 7 3 V valine 6.1 15 1 W tryptophan 0.8 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 suprabasin HRNR 0.051 hornerin FLG 0.032 filaggrin LOC727962 0.032 PREDICTED: similar to collagen, type I, alpha 2 [Ho... HNRNPM 0.032 heterogeneous nuclear ribonucleoprotein M isoform a ... HNRNPM 0.032 heterogeneous nuclear ribonucleoprotein M isoform b... RPGR 0.030 retinitis pigmentosa GTPase regulator isoform C [Hom... RPTN 0.030 repetin DMKN 0.028 dermokine isoform 3 precursor LOC653203 0.025 PREDICTED: hypothetical protein FLG2 0.023 filaggrin family member 2 COL6A6 0.017 collagen type VI alpha 6 COL1A1 0.017 alpha 1 type I collagen preproprotein OTUD7A 0.017 OTU domain containing 7A LOC100128960 0.017 PREDICTED: similar to paraneoplastic antigen MA2 [H... LOC100128960 0.017 PREDICTED: similar to Putative paraneoplastic antig... TPR 0.015 nuclear pore complex-associated protein TPR SLC13A1 0.015 solute carrier family 13 (sodium/sulfate symporters)... CGN 0.015 cingulin DMKN 0.013 dermokine isoform 4 precursor DMKN 0.013 dermokine isoform 5 precursor DMKN 0.013 dermokine isoform 2 precursor SRCAP 0.013 Snf2-related CBP activator protein COL9A3 0.013 alpha 3 type IX collagen EMILIN1 0.013 elastin microfibril interfacer 1 COL4A1 0.011 alpha 1 type IV collagen preproprotein SLC38A10 0.011 solute carrier family 38, member 10 isoform a SLC38A10 0.011 solute carrier family 38, member 10 isoform b APOB48R 0.011 apolipoprotein B48 receptor DMD 0.011 dystrophin Dp427c isoform Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.