| Name: APOB48R | Sequence: fasta or formatted (1088aa) | NCBI GI: 119220598 | |
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Description: apolipoprotein B48 receptor
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 12.9 140 3 C cysteine 0.7 8 1 D aspartate 3.9 42 2 E glutamate 18.5 201 6 F phenylalanine 0.8 9 1 G glycine 14.2 155 2 H histidine 1.6 17 1 I isoleucine 0.7 8 1 K lysine 2.2 24 2 L leucine 6.3 69 2 M methionine 1.4 15 2 N asparagine 0.7 8 1 P proline 5.3 58 2 Q glutamine 4.9 53 2 R arginine 7.4 81 3 S serine 6.5 71 3 T threonine 4.9 53 2 V valine 4.8 52 4 W tryptophan 1.7 19 1 Y tyrosine 0.5 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 apolipoprotein B48 receptor RPGR 0.041 retinitis pigmentosa GTPase regulator isoform C [Hom... RP1L1 0.037 retinitis pigmentosa 1-like 1 NES 0.030 nestin ANKRD24 0.024 ankyrin repeat domain 24 EHBP1L1 0.022 tangerin CLIC6 0.021 chloride intracellular channel 6 PALM3 0.020 hypothetical protein LOC342979 FLG 0.020 filaggrin C1orf173 0.020 hypothetical protein LOC127254 LOC100292370 0.019 PREDICTED: hypothetical protein HRNR 0.018 hornerin TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform c ... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform f... ACAN 0.017 aggrecan isoform 2 precursor ACAN 0.017 aggrecan isoform 1 precursor AKAP12 0.015 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.015 A kinase (PRKA) anchor protein 12 isoform 2 CRNN 0.015 cornulin HIRIP3 0.015 HIRA interacting protein 3 ARHGAP30 0.015 Rho GTPase activating protein 30 isoform 1 CROCC 0.014 ciliary rootlet coiled-coil CHGA 0.014 chromogranin A precursor BCAN 0.013 brevican isoform 1 TNKS1BP1 0.013 tankyrase 1-binding protein 1 PPP1R15A 0.013 protein phosphatase 1, regulatory subunit 15A [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
