Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PILRA Sequence: fasta or formatted (303aa) NCBI GI: 30179909
Description:

paired immunoglobulin-like type 2 receptor alpha isoform 1 precursor

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [230aa] paired immunoglobulin-like type 2 receptor alpha isoform 2 precursor
alt prot [175aa] paired immunoglobulin-like type 2 receptor alpha isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         14           1
 C cysteine            0.7          2           1
 D aspartate           2.6          8           2
 E glutamate           4.0         12           2
 F phenylalanine       3.0          9           1
 G glycine             6.6         20           2
 H histidine           2.0          6           1
 I isoleucine          4.0         12           1
 K lysine              4.0         12           1
 L leucine            10.6         32           3
 M methionine          1.3          4           1
 N asparagine          3.0          9           1
 P proline             7.9         24           2
 Q glutamine           5.9         18           2
 R arginine            8.3         25           3
 S serine             11.2         34           3
 T threonine           9.9         30           5
 V valine              5.0         15           1
 W tryptophan          2.3          7           1
 Y tyrosine            3.3         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paired immunoglobulin-like type 2 receptor alpha iso... 
PILRB                 0.578   paired immunoglobulin-like type 2 receptor beta isof...
PILRB                 0.578   paired immunoglobulin-like type 2 receptor beta isof...
PILRA                 0.498   paired immunoglobulin-like type 2 receptor alpha iso...
PILRA                 0.493   paired immunoglobulin-like type 2 receptor alpha iso...
CD300LF               0.029   NK inhibitory receptor precursor 
PILRB                 0.025   paired immunoglobulin-like type 2 receptor beta isof...
C17orf87              0.025   hypothetical protein LOC388325 
LRRN1                 0.024   leucine rich repeat neuronal 1 
SIGLEC5               0.022   sialic acid binding Ig-like lectin 5 
SIGLEC14              0.022   sialic acid binding Ig-like lectin 14 
CD22                  0.022   CD22 molecule 
SIGLEC15              0.020   sialic acid binding Ig-like lectin 15 
VSIG4                 0.019   V-set and immunoglobulin domain containing 4 isofor...
CSF1                  0.014   colony stimulating factor 1 isoform b precursor [Hom...
TIMD4                 0.014   T-cell immunoglobulin and mucin domain containing 4...
TIMD4                 0.014   T-cell immunoglobulin and mucin domain containing 4...
VPREB1                0.014   immunoglobulin iota chain precursor 
LOC730474             0.012   PREDICTED: hypothetical protein, partial 
SIGLEC11              0.012   sialic acid binding Ig-like lectin 11 isoform 2 [Ho...
SIGLEC11              0.012   sialic acid binding Ig-like lectin 11 isoform 1 [Ho...
CD8B                  0.012   CD8b antigen isoform 1 precursor 
CD8B                  0.012   CD8b antigen isoform 5 precursor 
CD8B                  0.012   CD8b antigen isoform 2 precursor 
CD8B                  0.012   CD8b antigen isoform 3 precursor 
CD244                 0.012   CD244 natural killer cell receptor 2B4 
LOC730474             0.012   PREDICTED: hypothetical protein 
NPTN                  0.012   neuroplastin isoform c precursor 
NPTN                  0.012   neuroplastin isoform b precursor 
IGSF9                 0.012   immunoglobulin superfamily, member 9 isoform a [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press