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Search of human proteins with 38156701
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38156701 microphthalmia-associated transcription factor
isoform 3 [Homo sapiens]
(519 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38156701 microphthalmia-associated transcription factor isofo... 1033 0.0
gi|38156705 microphthalmia-associated transcription factor isofo... 971 0.0
gi|38156699 microphthalmia-associated transcription factor isofo... 967 0.0
gi|38156703 microphthalmia-associated transcription factor isofo... 966 0.0
gi|38156697 microphthalmia-associated transcription factor isofo... 810 0.0
gi|4557755 microphthalmia-associated transcription factor isofor... 804 0.0
gi|8659574 transcription factor E3 [Homo sapiens] 433 e-121
gi|24307933 transcription factor EB [Homo sapiens] 357 2e-98
gi|6912702 transcription factor EC isoform a [Homo sapiens] 284 1e-76
gi|64762402 transcription factor EC isoform b [Homo sapiens] 265 1e-70
gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens] 59 1e-08
gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens] 59 1e-08
gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens] 56 9e-08
gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens] 56 9e-08
gi|52630419 sterol regulatory element binding transcription fact... 54 3e-07
gi|22547195 sterol regulatory element binding transcription fact... 54 3e-07
gi|27477113 sterol regulatory element-binding transcription fact... 52 1e-06
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 52 2e-06
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|56549696 E1A binding protein p400 [Homo sapiens] 44 5e-04
gi|4758010 clock [Homo sapiens] 43 6e-04
gi|5453734 MAD4 [Homo sapiens] 43 8e-04
gi|31745180 aryl hydrocarbon receptor nuclear translocator-like ... 42 0.001
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo... 42 0.001
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 42 0.001
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 42 0.002
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 42 0.002
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 41 0.003
>gi|38156701 microphthalmia-associated transcription factor isoform
3 [Homo sapiens]
Length = 519
Score = 1033 bits (2672), Expect = 0.0
Identities = 519/519 (100%), Positives = 519/519 (100%)
Query: 1 MGHLENTSVVFPRAIFSLCEKETRKLTLCLFSRSSSAEHPGASKPPISSSSMTSRILLRQ 60
MGHLENTSVVFPRAIFSLCEKETRKLTLCLFSRSSSAEHPGASKPPISSSSMTSRILLRQ
Sbjct: 1 MGHLENTSVVFPRAIFSLCEKETRKLTLCLFSRSSSAEHPGASKPPISSSSMTSRILLRQ 60
Query: 61 QLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQT 120
QLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQT
Sbjct: 61 QLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQT 120
Query: 121 HLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSP 180
HLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSP
Sbjct: 121 HLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSP 180
Query: 181 MAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEI 240
MAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEI
Sbjct: 181 MAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEI 240
Query: 241 LGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALA 300
LGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALA
Sbjct: 241 LGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALA 300
Query: 301 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 360
KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE
Sbjct: 301 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 360
Query: 361 QQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPV 420
QQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPV
Sbjct: 361 QQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPV 420
Query: 421 LENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMD 480
LENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMD
Sbjct: 421 LENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMD 480
Query: 481 DTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 519
DTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 481 DTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 519
>gi|38156705 microphthalmia-associated transcription factor isoform
6 [Homo sapiens]
Length = 495
Score = 971 bits (2511), Expect = 0.0
Identities = 488/489 (99%), Positives = 488/489 (99%)
Query: 31 FSRSSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVP 90
FS SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVP
Sbjct: 7 FSHSSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVP 66
Query: 91 VSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKH 150
VSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKH
Sbjct: 67 VSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKH 126
Query: 151 ANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPG 210
ANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPG
Sbjct: 127 ANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPG 186
Query: 211 MNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLP 270
MNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLP
Sbjct: 187 MNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLP 246
Query: 271 PPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTL 330
PPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTL
Sbjct: 247 PPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTL 306
Query: 331 IPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEM 390
IPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEM
Sbjct: 307 IPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEM 366
Query: 391 QARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITF 450
QARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITF
Sbjct: 367 QARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITF 426
Query: 451 NNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSM 510
NNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSM
Sbjct: 427 NNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSM 486
Query: 511 SMEETEHTC 519
SMEETEHTC
Sbjct: 487 SMEETEHTC 495
>gi|38156699 microphthalmia-associated transcription factor isoform
1 [Homo sapiens]
Length = 520
Score = 967 bits (2501), Expect = 0.0
Identities = 486/486 (100%), Positives = 486/486 (100%)
Query: 34 SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ 93
SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ
Sbjct: 35 SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ 94
Query: 94 TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ 153
TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ
Sbjct: 95 TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ 154
Query: 154 VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT 213
VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT
Sbjct: 155 VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT 214
Query: 214 HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG 273
HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG
Sbjct: 215 HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG 274
Query: 274 LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 333
LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK
Sbjct: 275 LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 334
Query: 334 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 393
SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR
Sbjct: 335 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 394
Query: 394 AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN 453
AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN
Sbjct: 395 AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN 454
Query: 454 LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME 513
LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME
Sbjct: 455 LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME 514
Query: 514 ETEHTC 519
ETEHTC
Sbjct: 515 ETEHTC 520
>gi|38156703 microphthalmia-associated transcription factor isoform
2 [Homo sapiens]
Length = 504
Score = 966 bits (2497), Expect = 0.0
Identities = 485/485 (100%), Positives = 485/485 (100%)
Query: 35 SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQT 94
SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQT
Sbjct: 20 SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQT 79
Query: 95 PAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQV 154
PAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQV
Sbjct: 80 PAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQV 139
Query: 155 LSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTH 214
LSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTH
Sbjct: 140 LSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTH 199
Query: 215 SRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGL 274
SRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGL
Sbjct: 200 SRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGL 259
Query: 275 TISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKS 334
TISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKS
Sbjct: 260 TISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKS 319
Query: 335 NDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARA 394
NDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARA
Sbjct: 320 NDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARA 379
Query: 395 HGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNL 454
HGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNL
Sbjct: 380 HGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNL 439
Query: 455 GTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE 514
GTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE
Sbjct: 440 GTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE 499
Query: 515 TEHTC 519
TEHTC
Sbjct: 500 TEHTC 504
>gi|38156697 microphthalmia-associated transcription factor isoform
5 [Homo sapiens]
Length = 413
Score = 810 bits (2093), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%)
Query: 117 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 176
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
Query: 177 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 236
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
Query: 237 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 296
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA
Sbjct: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 190
Query: 297 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 356
RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK
Sbjct: 191 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 250
Query: 357 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 416
LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK
Sbjct: 251 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 310
Query: 417 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 476
QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED
Sbjct: 311 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 370
Query: 477 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 519
ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 371 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
>gi|4557755 microphthalmia-associated transcription factor isoform 4
[Homo sapiens]
Length = 419
Score = 804 bits (2076), Expect = 0.0
Identities = 402/409 (98%), Positives = 403/409 (98%), Gaps = 6/409 (1%)
Query: 117 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 176
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
Query: 177 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 236
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
Query: 237 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT---- 292
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT
Sbjct: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIF 190
Query: 293 --ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 350
ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS
Sbjct: 191 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
Query: 351 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 410
VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL
Sbjct: 251 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 310
Query: 411 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 470
VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM
Sbjct: 311 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 370
Query: 471 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 519
GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 371 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 433 bits (1114), Expect = e-121
Identities = 273/541 (50%), Positives = 330/541 (60%), Gaps = 108/541 (19%)
Query: 27 TLCLFSRSSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQ 86
T S SSSA G S+ P SSS +SR+LLRQQLMR Q QEQERRE++++ AA F
Sbjct: 88 TPATLSASSSA---GGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPS 144
Query: 87 QRVPVSQTPAINV------SVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQ 140
P +PAI+V + P QVP EVLKVQTHLENPT+YH+QQA+RQQVKQ
Sbjct: 145 ---PAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQ 201
Query: 141 YLSTTLANKHANQVLSLPCPNQPGDHVMPPVPG----------SSAPNSPMAMLTLNSNC 190
YLSTTL K A+Q L+ P PG P+P SAPNSPMA+LT+ S+
Sbjct: 202 YLSTTLGPKLASQALTPP----PGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSS 257
Query: 191 EKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMD---PA 247
EKE +DDVID+IISLESSYN+E+L +
Sbjct: 258 EKE----------------------------IDDVIDEIISLESSYNDEMLSYLPGGTTG 289
Query: 248 LQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKD 307
LQ+ +TLPVSGNL+D+Y +QG+ P +T+SNSCPA LPNIKRE++E+EA+AL KERQKKD
Sbjct: 290 LQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKD 349
Query: 308 NHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKEL 367
NHNLIERRRRFNINDRIKELGTLIPKS+DP+MRWNKGTILKASVDYIRKLQ+EQQR+K+L
Sbjct: 350 NHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDL 409
Query: 368 ENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQD 427
E+RQ+ LE ANR L LRIQELE+QA+ HGL + P+ GL S + S
Sbjct: 410 ESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLS-----------LATTSASDS 458
Query: 428 LLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSK-------------- 473
L D+ + G TF ++G G N + P S
Sbjct: 459 LKPEQLDI----EEEGRPGAATF--HVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGD 512
Query: 474 --------LEDILMDD-----------TLSPV-GVTDPLLSSVSPGASKTSSRRSSMSME 513
LEDILM++ LSP+ +DPLLSSVSP SK SSRRSS SME
Sbjct: 513 LGDPFHLGLEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSME 572
Query: 514 E 514
E
Sbjct: 573 E 573
>gi|24307933 transcription factor EB [Homo sapiens]
Length = 476
Score = 357 bits (915), Expect = 2e-98
Identities = 230/509 (45%), Positives = 300/509 (58%), Gaps = 83/509 (16%)
Query: 52 MTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ-------TPAINVSVPTT 104
M SRI LR QLMREQ Q++E+RE+ Q+ +MQQ+ Q TPAIN P
Sbjct: 1 MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQLGGPPTPAINT--PVH 58
Query: 105 LPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSL------P 158
S VP EVLKVQ++LENPT YH+QQ+Q Q+V++YLS T NK A + P
Sbjct: 59 FQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPP 118
Query: 159 CPNQPG---DHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHS 215
PG HV+ G+SAPNSPMAML + SN E+E
Sbjct: 119 PAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERE---------------------- 156
Query: 216 RASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLT 275
+DDVID+I+ L+ ++LG ++P +QM NTLP+S + +++Y + L
Sbjct: 157 ------LDDVIDNIMRLD-----DVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLV 205
Query: 276 --ISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 333
S+SCPA+L KRELT++E+RALAKERQKKDNHNLIERRRRFNINDRIKELG LIPK
Sbjct: 206 GVTSSSCPADLTQ-KRELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPK 264
Query: 334 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 393
+ND D+RWNKGTILKASVDYIR++Q++ Q+++ELEN ++LE N+ L LRIQELEMQAR
Sbjct: 265 ANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQAR 324
Query: 394 AHGLSLIPSTGLCSPDLVNRIIKQE-PVLENCSQDL--------------LQHHADLTCT 438
HGL +G+ +L +++KQE P E + L L A L
Sbjct: 325 VHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLP 384
Query: 439 TTLDLTDGTITFNNNLGTG---TEANQAYSVPTKMG----------SKLEDILMDDTLSP 485
T + F+++L G E Y P G L+ +L+DD+L P
Sbjct: 385 TQPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLP 444
Query: 486 VGVTDPLLSSVSPGASKTSSRRSSMSMEE 514
+ +DPLLS++SP ASK SSRRSS SMEE
Sbjct: 445 L-ASDPLLSTMSPEASKASSRRSSFSMEE 472
>gi|6912702 transcription factor EC isoform a [Homo sapiens]
Length = 347
Score = 284 bits (727), Expect = 1e-76
Identities = 171/296 (57%), Positives = 214/296 (72%), Gaps = 16/296 (5%)
Query: 222 MDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLY-GNQGLPP--PGLTISN 278
M+DVI+DII +ESS+ EE D L M TL SG+++D+Y G QG+ P GLT S
Sbjct: 61 MEDVIEDIIGMESSFKEEGA---DSPLLMQRTL--SGSILDVYSGEQGISPINMGLT-SA 114
Query: 279 SCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPD 338
SCP++LP +KRE+TE++ RALAKERQKKDNHNLIERRRR+NIN RIKELGTLIPKSNDPD
Sbjct: 115 SCPSSLP-MKREITETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPD 173
Query: 339 MRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLS 398
MRWNKGTILKASV+YI+ LQ+EQQRA+ELE+RQKKLE ANR LLLRIQELE+QAR HGL
Sbjct: 174 MRWNKGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLP 233
Query: 399 LIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGT 458
+ S G + DL + KQ+ E S D Q ++ + +L D I F++ L T
Sbjct: 234 TLASLG--TVDLGAHVTKQQSHPEQNSVDYCQQ-LTVSQGPSPELCDQAIAFSDPLSYFT 290
Query: 459 EANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE 514
+ + +S K +L+ +L+DDT+SP G TDPLLS+ SP SK SSRRSS S ++
Sbjct: 291 DLS--FSAALKEEQRLDGMLLDDTISPFG-TDPLLSATSPAVSKESSRRSSFSSDD 343
>gi|64762402 transcription factor EC isoform b [Homo sapiens]
Length = 318
Score = 265 bits (676), Expect = 1e-70
Identities = 154/262 (58%), Positives = 194/262 (74%), Gaps = 11/262 (4%)
Query: 256 VSGNLIDLY-GNQGLPP--PGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLI 312
+SG+++D+Y G QG+ P GLT S SCP++LP +KRE+TE++ RALAKERQKKDNHNLI
Sbjct: 61 LSGSILDVYSGEQGISPINMGLT-SASCPSSLP-MKREITETDTRALAKERQKKDNHNLI 118
Query: 313 ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQK 372
ERRRR+NIN RIKELGTLIPKSNDPDMRWNKGTILKASV+YI+ LQ+EQQRA+ELE+RQK
Sbjct: 119 ERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQRARELEHRQK 178
Query: 373 KLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHH 432
KLE ANR LLLRIQELE+QAR HGL + S G + DL + KQ+ E S D Q
Sbjct: 179 KLEQANRRLLLRIQELEIQARTHGLPTLASLG--TVDLGAHVTKQQSHPEQNSVDYCQQ- 235
Query: 433 ADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPL 492
++ + +L D I F++ L T+ + +S K +L+ +L+DDT+SP G TDPL
Sbjct: 236 LTVSQGPSPELCDQAIAFSDPLSYFTDLS--FSAALKEEQRLDGMLLDDTISPFG-TDPL 292
Query: 493 LSSVSPGASKTSSRRSSMSMEE 514
LS+ SP SK SSRRSS S ++
Sbjct: 293 LSATSPAVSKESSRRSSFSSDD 314
>gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
Length = 279
Score = 58.9 bits (141), Expect = 1e-08
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 301 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 358
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 165 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 224
Query: 359 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 400
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 225 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 273
>gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]
Length = 346
Score = 58.9 bits (141), Expect = 1e-08
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 301 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 358
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 232 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 291
Query: 359 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 400
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 292 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 340
>gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]
Length = 310
Score = 55.8 bits (133), Expect = 9e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 293 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 350
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
Query: 351 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 398
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
Query: 399 LI 400
++
Sbjct: 303 VV 304
>gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]
Length = 251
Score = 55.8 bits (133), Expect = 9e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 293 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 350
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
Query: 351 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 398
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
Query: 399 LI 400
++
Sbjct: 244 VV 245
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 54.3 bits (129), Expect = 3e-07
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 287 IKRELTESEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGT 345
I R S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK
Sbjct: 335 INRLAAGSKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSA 391
Query: 346 ILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL 381
+L+ ++DYIR LQ Q+ K+ + H ++ L
Sbjct: 392 VLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSL 427
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 54.3 bits (129), Expect = 3e-07
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 287 IKRELTESEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGT 345
I R S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK
Sbjct: 305 INRLAAGSKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSA 361
Query: 346 ILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL 381
+L+ ++DYIR LQ Q+ K+ + H ++ L
Sbjct: 362 VLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSL 397
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 52.0 bits (123), Expect = 1e-06
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 301 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 360
KE +++ HN+IE+R R +IND+I EL L+ + D + +K +L+ ++DYI+ LQ+
Sbjct: 327 KEGERRTTHNIIEKRYRSSINDKIIELKDLVMGT---DAKMHKSGVLRKAIDYIKYLQQV 383
Query: 361 QQRAKELENRQKKLEHANRHLL 382
+ ++ EN KL + LL
Sbjct: 384 NHKLRQ-ENMVLKLANQKNKLL 404
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 51.6 bits (122), Expect = 2e-06
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 290 ELTESEARALAKERQK-KDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILK 348
E+TE+E + R+K ++ HN +ER R+ IN I +G LIP S P ++ +K IL
Sbjct: 3 EMTENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIPCS--PALKQSKNMILD 60
Query: 349 ASVDYIRKLQRE----------QQRAKELENRQKKLEHANR 379
+ YI +L+R+ ++A+E++ +K+LE +
Sbjct: 61 QAFKYITELKRQNDELLLNGGNNEQAEEIKKLRKQLEEIQK 101
Score = 29.3 bits (64), Expect = 9.1
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 63 MREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHL 122
+++Q Q+Q++++QQQ+ Q A +++R + Q + VP S P V H
Sbjct: 1460 IKQQQQQQQQQQQQQQQQQAGQLRERHHLYQ---MQHHVPHAESSVHSQPHNV-----HQ 1511
Query: 123 ENPTKYHIQQAQRQQVKQYLST---TLANKHANQVLSLPCPNQPGDH 166
+ + +Q +++ + Q T +L KH S QP H
Sbjct: 1512 QRTLQQEVQMQKKRNLVQGTQTSQLSLQPKHHGTDQSRSKTGQPHPH 1558
>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
isoform b [Homo sapiens]
Length = 582
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 285 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 344
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 14 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 69
Query: 345 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 384
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 70 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 110
>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 285 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 344
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
Query: 345 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 384
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 285 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 344
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
Query: 345 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 384
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 43.5 bits (101), Expect = 5e-04
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 39/158 (24%)
Query: 32 SRSSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPV 91
S+++ + PG + P LLRQQ ++Q Q+Q++++QQQ+ Q Q QQ+
Sbjct: 2697 SQATGVQLPGKTITPAHFQ------LLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ--- 2747
Query: 92 SQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHA 151
TT S QVP ++Q ++P Q+K T +
Sbjct: 2748 -----------TTTTSQVQVP----QIQGQAQSPA----------QIKAVGKLTPEHLIK 2782
Query: 152 NQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSN 189
Q L P QP PP SAP P A + + ++
Sbjct: 2783 MQKQKLQMPPQP-----PPPQAQSAPPQPTAQVQVQTS 2815
Score = 29.6 bits (65), Expect = 7.0
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 52 MTSRILLRQQLMREQMQEQERREQ-----QQKLQAAQFM----QQRVPVSQTPAINVSVP 102
M + L+QQ +++Q Q + Q QQK+ A Q QQ+V + PA+
Sbjct: 2926 MQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFL 2985
Query: 103 TTLPSATQVPMEVLKVQTHL-----------ENPTK--YHIQQAQRQQVKQYLSTTLANK 149
TT S Q +VQT + + P + A +Q Q ++ T A
Sbjct: 2986 TTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATA 3045
Query: 150 HANQVLSLP 158
QV +P
Sbjct: 3046 AGQQVQMIP 3054
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 43.1 bits (100), Expect = 6e-04
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 301 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 360
K++ K+ + N E++RR N IKELG+++P + + +K T+L+ S+D++RK +
Sbjct: 31 KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGN---ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 361 QQRAKELENRQ 371
++ E RQ
Sbjct: 88 TAQSDASEIRQ 98
>gi|5453734 MAD4 [Homo sapiens]
Length = 209
Score = 42.7 bits (99), Expect = 8e-04
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 289 RELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILK 348
RE T++ A + K + +HN +E+ RR + +++L L+P D R ++LK
Sbjct: 39 REKTKA-AGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD-STRHTTLSLLK 96
Query: 349 ASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQA 392
+ +I+KL+ + +RA + +++L+ +R L R+++L +Q+
Sbjct: 97 RAKVHIKKLEEQDRRALSI---KEQLQQEHRFLKRRLEQLSVQS 137
>gi|31745180 aryl hydrocarbon receptor nuclear translocator-like 2
[Homo sapiens]
Length = 636
Score = 42.4 bits (98), Expect = 0.001
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 301 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 360
K + ++ H+ E+RRR +N+ I+EL +IP+ N + +K T+L+ +V ++R L+
Sbjct: 104 KMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGL 163
Query: 361 QQRAKELENRQKKL-EHANRHLLLRIQE 387
R L ++ RHL+L+ E
Sbjct: 164 TNSYVGSNYRPSFLQDNELRHLILKTAE 191
>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
2 [Homo sapiens]
Length = 328
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 292 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 351
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 352 DYIRKLQ 358
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 292 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 351
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 352 DYIRKLQ 358
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 41.6 bits (96), Expect = 0.002
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 266 NQGLPPPGLTISNSCPANLPNI--KRELTESEARALAKERQKKDNHNLIERRRRFNINDR 323
++ PP S + P L ++ + + S + +++ +++ NHN++ER+RR ++
Sbjct: 341 SEDAPPQKKIKSEASPRPLKSVIPPKAKSLSPRNSDSEDSERRRNHNILERQRRNDLRSS 400
Query: 324 IKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQR----AKELENRQ----KKLE 375
L +P+ + + K ILK + +Y+ LQ E+ + ++L+ RQ KK+E
Sbjct: 401 FLTLRDHVPELVKNE-KAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIE 459
Query: 376 HA 377
HA
Sbjct: 460 HA 461
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 264 YGNQGLPPPGLTISNSCPAN---------------LPNIKRELTESEARALAK------E 302
Y + PPP + P++ LP SE R+ +
Sbjct: 172 YSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDH 231
Query: 303 RQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW----NKGTILKASVDYIRKLQ 358
R + +H ER R + +R + P D R+ ++G Y R +
Sbjct: 232 RHRDHSHGRGERHRSLDRRERGRS-----PDRRRQDSRYRSDYDRGRTPSRHRSYERSRE 286
Query: 359 REQQRAKELENRQK-KLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 416
RE++R + +NR+ LE + + +E + R++GLS++P C+P+L IIK
Sbjct: 287 RERERHRHRDNRRSPSLERSYK------KEYKRSGRSYGLSVVPEPAGCTPELPGEIIK 339
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 60 QQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ 119
Q++ + Q+Q+Q++++QQQ+ Q Q +Q + P+ Q P P P + L Q
Sbjct: 239 QRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPP---------PSQALPQQ 289
Query: 120 THLENPTKYHIQQAQRQQ--VKQYLSTTLANKHANQVLSLPCPNQPGD--HVMPPVPGSS 175
+ T++H Q QQ V Q + L + Q L PG + PP+
Sbjct: 290 LQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVR 349
Query: 176 AP 177
AP
Sbjct: 350 AP 351
Score = 35.8 bits (81), Expect = 0.097
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 47 ISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLP 106
+S+++ +++ L+Q +++Q Q+Q+ ++QQQ A Q QQ+ Q A ++
Sbjct: 144 VSTATPQTQLQLQQVALQQQQQQQQFQQQQQ--AALQQQQQQQQQQQFQAQQSAMQQQFQ 201
Query: 107 SATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ 153
+ Q ++ + Q ++ K H Q Q+ Q +Q +A Q
Sbjct: 202 AVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQ 248
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,611,919
Number of Sequences: 37866
Number of extensions: 970427
Number of successful extensions: 7460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 5484
Number of HSP's gapped (non-prelim): 1110
length of query: 519
length of database: 18,247,518
effective HSP length: 107
effective length of query: 412
effective length of database: 14,195,856
effective search space: 5848692672
effective search space used: 5848692672
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.