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Search of human proteins with 38156699
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38156699 microphthalmia-associated transcription factor
isoform 1 [Homo sapiens]
(520 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38156699 microphthalmia-associated transcription factor isofo... 1036 0.0
gi|38156705 microphthalmia-associated transcription factor isofo... 967 0.0
gi|38156701 microphthalmia-associated transcription factor isofo... 967 0.0
gi|38156703 microphthalmia-associated transcription factor isofo... 966 0.0
gi|38156697 microphthalmia-associated transcription factor isofo... 810 0.0
gi|4557755 microphthalmia-associated transcription factor isofor... 804 0.0
gi|8659574 transcription factor E3 [Homo sapiens] 448 e-126
gi|24307933 transcription factor EB [Homo sapiens] 357 2e-98
gi|6912702 transcription factor EC isoform a [Homo sapiens] 284 1e-76
gi|64762402 transcription factor EC isoform b [Homo sapiens] 265 1e-70
gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens] 59 1e-08
gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens] 59 1e-08
gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens] 56 9e-08
gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens] 56 9e-08
gi|52630419 sterol regulatory element binding transcription fact... 54 3e-07
gi|22547195 sterol regulatory element binding transcription fact... 54 3e-07
gi|27477113 sterol regulatory element-binding transcription fact... 52 1e-06
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 52 2e-06
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|4758010 clock [Homo sapiens] 43 6e-04
gi|56549696 E1A binding protein p400 [Homo sapiens] 43 6e-04
gi|5453734 MAD4 [Homo sapiens] 43 8e-04
gi|31745180 aryl hydrocarbon receptor nuclear translocator-like ... 42 0.001
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo... 42 0.001
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 42 0.001
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 42 0.002
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 42 0.002
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 41 0.003
>gi|38156699 microphthalmia-associated transcription factor isoform
1 [Homo sapiens]
Length = 520
Score = 1036 bits (2680), Expect = 0.0
Identities = 520/520 (100%), Positives = 520/520 (100%)
Query: 1 MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLR 60
MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLR
Sbjct: 1 MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLR 60
Query: 61 QQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ 120
QQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ
Sbjct: 61 QQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ 120
Query: 121 THLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNS 180
THLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNS
Sbjct: 121 THLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNS 180
Query: 181 PMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEE 240
PMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEE
Sbjct: 181 PMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEE 240
Query: 241 ILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARAL 300
ILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARAL
Sbjct: 241 ILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARAL 300
Query: 301 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 360
AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR
Sbjct: 301 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 360
Query: 361 EQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEP 420
EQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEP
Sbjct: 361 EQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEP 420
Query: 421 VLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILM 480
VLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILM
Sbjct: 421 VLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILM 480
Query: 481 DDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 520
DDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 481 DDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 520
>gi|38156705 microphthalmia-associated transcription factor isoform
6 [Homo sapiens]
Length = 495
Score = 967 bits (2501), Expect = 0.0
Identities = 486/486 (100%), Positives = 486/486 (100%)
Query: 35 SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ 94
SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ
Sbjct: 10 SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ 69
Query: 95 TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ 154
TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ
Sbjct: 70 TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ 129
Query: 155 VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT 214
VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT
Sbjct: 130 VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT 189
Query: 215 HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG 274
HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG
Sbjct: 190 HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG 249
Query: 275 LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 334
LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK
Sbjct: 250 LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 309
Query: 335 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 394
SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR
Sbjct: 310 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 369
Query: 395 AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN 454
AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN
Sbjct: 370 AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN 429
Query: 455 LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME 514
LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME
Sbjct: 430 LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME 489
Query: 515 ETEHTC 520
ETEHTC
Sbjct: 490 ETEHTC 495
>gi|38156701 microphthalmia-associated transcription factor isoform
3 [Homo sapiens]
Length = 519
Score = 967 bits (2501), Expect = 0.0
Identities = 486/486 (100%), Positives = 486/486 (100%)
Query: 35 SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ 94
SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ
Sbjct: 34 SSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ 93
Query: 95 TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ 154
TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ
Sbjct: 94 TPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQ 153
Query: 155 VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT 214
VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT
Sbjct: 154 VLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNT 213
Query: 215 HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG 274
HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG
Sbjct: 214 HSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPG 273
Query: 275 LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 334
LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK
Sbjct: 274 LTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 333
Query: 335 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 394
SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR
Sbjct: 334 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 393
Query: 395 AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN 454
AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN
Sbjct: 394 AHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNN 453
Query: 455 LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME 514
LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME
Sbjct: 454 LGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME 513
Query: 515 ETEHTC 520
ETEHTC
Sbjct: 514 ETEHTC 519
>gi|38156703 microphthalmia-associated transcription factor isoform
2 [Homo sapiens]
Length = 504
Score = 966 bits (2497), Expect = 0.0
Identities = 485/485 (100%), Positives = 485/485 (100%)
Query: 36 SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQT 95
SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQT
Sbjct: 20 SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQT 79
Query: 96 PAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQV 155
PAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQV
Sbjct: 80 PAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQV 139
Query: 156 LSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTH 215
LSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTH
Sbjct: 140 LSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTH 199
Query: 216 SRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGL 275
SRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGL
Sbjct: 200 SRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGL 259
Query: 276 TISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKS 335
TISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKS
Sbjct: 260 TISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKS 319
Query: 336 NDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARA 395
NDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARA
Sbjct: 320 NDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARA 379
Query: 396 HGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNL 455
HGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNL
Sbjct: 380 HGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNL 439
Query: 456 GTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE 515
GTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE
Sbjct: 440 GTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE 499
Query: 516 TEHTC 520
TEHTC
Sbjct: 500 TEHTC 504
>gi|38156697 microphthalmia-associated transcription factor isoform
5 [Homo sapiens]
Length = 413
Score = 810 bits (2093), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%)
Query: 118 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 177
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
Query: 178 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 237
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
Query: 238 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 297
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA
Sbjct: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 190
Query: 298 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 357
RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK
Sbjct: 191 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 250
Query: 358 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 417
LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK
Sbjct: 251 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 310
Query: 418 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 477
QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED
Sbjct: 311 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 370
Query: 478 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 520
ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 371 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
>gi|4557755 microphthalmia-associated transcription factor isoform 4
[Homo sapiens]
Length = 419
Score = 804 bits (2076), Expect = 0.0
Identities = 402/409 (98%), Positives = 403/409 (98%), Gaps = 6/409 (1%)
Query: 118 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 177
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
Query: 178 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 237
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
Query: 238 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT---- 293
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT
Sbjct: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIF 190
Query: 294 --ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 351
ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS
Sbjct: 191 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
Query: 352 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 411
VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL
Sbjct: 251 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 310
Query: 412 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 471
VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM
Sbjct: 311 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 370
Query: 472 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 520
GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 371 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 448 bits (1153), Expect = e-126
Identities = 285/582 (48%), Positives = 347/582 (59%), Gaps = 124/582 (21%)
Query: 4 ESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSS-----------------AEHPGASKP 46
ESGIV D E+ +P ++YELKSQPL SS + G S+
Sbjct: 46 ESGIVADIELENVL--DPDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRT 103
Query: 47 PISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINV------ 100
P SSS +SR+LLRQQLMR Q QEQERRE++++ AA F P +PAI+V
Sbjct: 104 PAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPS---PAPASPAISVVGVSAG 160
Query: 101 SVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPC 160
+ P QVP EVLKVQTHLENPT+YH+QQA+RQQVKQYLSTTL K A+Q L+ P
Sbjct: 161 GHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPP- 219
Query: 161 PNQPGDHVMPPVPG----------SSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECP 210
PG P+P SAPNSPMA+LT+ S+ EKE
Sbjct: 220 ---PGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSEKE---------------- 260
Query: 211 GMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMD---PALQMANTLPVSGNLIDLYGN 267
+DDVID+IISLESSYN+E+L + LQ+ +TLPVSGNL+D+Y +
Sbjct: 261 ------------IDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSS 308
Query: 268 QGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKE 327
QG+ P +T+SNSCPA LPNIKRE++E+EA+AL KERQKKDNHNLIERRRRFNINDRIKE
Sbjct: 309 QGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKE 368
Query: 328 LGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQ 387
LGTLIPKS+DP+MRWNKGTILKASVDYIRKLQ+EQQR+K+LE+RQ+ LE ANR L LRIQ
Sbjct: 369 LGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQ 428
Query: 388 ELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDG 447
ELE+QA+ HGL + P+ GL S + S L D+ + G
Sbjct: 429 ELELQAQIHGLPVPPTPGLLS-----------LATTSASDSLKPEQLDI----EEEGRPG 473
Query: 448 TITFNNNLGTGTEANQAYSVPTKMGSK----------------------LEDILMDD--- 482
TF ++G G N + P S LEDILM++
Sbjct: 474 AATF--HVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEG 531
Query: 483 --------TLSPV-GVTDPLLSSVSPGASKTSSRRSSMSMEE 515
LSP+ +DPLLSSVSP SK SSRRSS SMEE
Sbjct: 532 VVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
>gi|24307933 transcription factor EB [Homo sapiens]
Length = 476
Score = 357 bits (915), Expect = 2e-98
Identities = 230/509 (45%), Positives = 300/509 (58%), Gaps = 83/509 (16%)
Query: 53 MTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ-------TPAINVSVPTT 105
M SRI LR QLMREQ Q++E+RE+ Q+ +MQQ+ Q TPAIN P
Sbjct: 1 MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQLGGPPTPAINT--PVH 58
Query: 106 LPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSL------P 159
S VP EVLKVQ++LENPT YH+QQ+Q Q+V++YLS T NK A + P
Sbjct: 59 FQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPP 118
Query: 160 CPNQPG---DHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHS 216
PG HV+ G+SAPNSPMAML + SN E+E
Sbjct: 119 PAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERE---------------------- 156
Query: 217 RASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLT 276
+DDVID+I+ L+ ++LG ++P +QM NTLP+S + +++Y + L
Sbjct: 157 ------LDDVIDNIMRLD-----DVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLV 205
Query: 277 --ISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 334
S+SCPA+L KRELT++E+RALAKERQKKDNHNLIERRRRFNINDRIKELG LIPK
Sbjct: 206 GVTSSSCPADLTQ-KRELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPK 264
Query: 335 SNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQAR 394
+ND D+RWNKGTILKASVDYIR++Q++ Q+++ELEN ++LE N+ L LRIQELEMQAR
Sbjct: 265 ANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQAR 324
Query: 395 AHGLSLIPSTGLCSPDLVNRIIKQE-PVLENCSQDL--------------LQHHADLTCT 439
HGL +G+ +L +++KQE P E + L L A L
Sbjct: 325 VHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLP 384
Query: 440 TTLDLTDGTITFNNNLGTG---TEANQAYSVPTKMG----------SKLEDILMDDTLSP 486
T + F+++L G E Y P G L+ +L+DD+L P
Sbjct: 385 TQPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLP 444
Query: 487 VGVTDPLLSSVSPGASKTSSRRSSMSMEE 515
+ +DPLLS++SP ASK SSRRSS SMEE
Sbjct: 445 L-ASDPLLSTMSPEASKASSRRSSFSMEE 472
>gi|6912702 transcription factor EC isoform a [Homo sapiens]
Length = 347
Score = 284 bits (727), Expect = 1e-76
Identities = 171/296 (57%), Positives = 214/296 (72%), Gaps = 16/296 (5%)
Query: 223 MDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLY-GNQGLPP--PGLTISN 279
M+DVI+DII +ESS+ EE D L M TL SG+++D+Y G QG+ P GLT S
Sbjct: 61 MEDVIEDIIGMESSFKEEGA---DSPLLMQRTL--SGSILDVYSGEQGISPINMGLT-SA 114
Query: 280 SCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPD 339
SCP++LP +KRE+TE++ RALAKERQKKDNHNLIERRRR+NIN RIKELGTLIPKSNDPD
Sbjct: 115 SCPSSLP-MKREITETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPD 173
Query: 340 MRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLS 399
MRWNKGTILKASV+YI+ LQ+EQQRA+ELE+RQKKLE ANR LLLRIQELE+QAR HGL
Sbjct: 174 MRWNKGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLP 233
Query: 400 LIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGT 459
+ S G + DL + KQ+ E S D Q ++ + +L D I F++ L T
Sbjct: 234 TLASLG--TVDLGAHVTKQQSHPEQNSVDYCQQ-LTVSQGPSPELCDQAIAFSDPLSYFT 290
Query: 460 EANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE 515
+ + +S K +L+ +L+DDT+SP G TDPLLS+ SP SK SSRRSS S ++
Sbjct: 291 DLS--FSAALKEEQRLDGMLLDDTISPFG-TDPLLSATSPAVSKESSRRSSFSSDD 343
>gi|64762402 transcription factor EC isoform b [Homo sapiens]
Length = 318
Score = 265 bits (676), Expect = 1e-70
Identities = 154/262 (58%), Positives = 194/262 (74%), Gaps = 11/262 (4%)
Query: 257 VSGNLIDLY-GNQGLPP--PGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLI 313
+SG+++D+Y G QG+ P GLT S SCP++LP +KRE+TE++ RALAKERQKKDNHNLI
Sbjct: 61 LSGSILDVYSGEQGISPINMGLT-SASCPSSLP-MKREITETDTRALAKERQKKDNHNLI 118
Query: 314 ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQK 373
ERRRR+NIN RIKELGTLIPKSNDPDMRWNKGTILKASV+YI+ LQ+EQQRA+ELE+RQK
Sbjct: 119 ERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQRARELEHRQK 178
Query: 374 KLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHH 433
KLE ANR LLLRIQELE+QAR HGL + S G + DL + KQ+ E S D Q
Sbjct: 179 KLEQANRRLLLRIQELEIQARTHGLPTLASLG--TVDLGAHVTKQQSHPEQNSVDYCQQ- 235
Query: 434 ADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPL 493
++ + +L D I F++ L T+ + +S K +L+ +L+DDT+SP G TDPL
Sbjct: 236 LTVSQGPSPELCDQAIAFSDPLSYFTDLS--FSAALKEEQRLDGMLLDDTISPFG-TDPL 292
Query: 494 LSSVSPGASKTSSRRSSMSMEE 515
LS+ SP SK SSRRSS S ++
Sbjct: 293 LSATSPAVSKESSRRSSFSSDD 314
>gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
Length = 279
Score = 58.9 bits (141), Expect = 1e-08
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 302 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 359
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 165 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 224
Query: 360 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 401
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 225 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 273
>gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]
Length = 346
Score = 58.9 bits (141), Expect = 1e-08
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 302 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 359
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 232 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 291
Query: 360 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 401
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 292 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 340
>gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]
Length = 310
Score = 55.8 bits (133), Expect = 9e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 294 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 351
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
Query: 352 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 399
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
Query: 400 LI 401
++
Sbjct: 303 VV 304
>gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]
Length = 251
Score = 55.8 bits (133), Expect = 9e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 294 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 351
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
Query: 352 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 399
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
Query: 400 LI 401
++
Sbjct: 244 VV 245
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 54.3 bits (129), Expect = 3e-07
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 288 IKRELTESEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGT 346
I R S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK
Sbjct: 335 INRLAAGSKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSA 391
Query: 347 ILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL 382
+L+ ++DYIR LQ Q+ K+ + H ++ L
Sbjct: 392 VLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSL 427
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 54.3 bits (129), Expect = 3e-07
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 288 IKRELTESEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGT 346
I R S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK
Sbjct: 305 INRLAAGSKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSA 361
Query: 347 ILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL 382
+L+ ++DYIR LQ Q+ K+ + H ++ L
Sbjct: 362 VLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSL 397
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 52.0 bits (123), Expect = 1e-06
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 302 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 361
KE +++ HN+IE+R R +IND+I EL L+ + D + +K +L+ ++DYI+ LQ+
Sbjct: 327 KEGERRTTHNIIEKRYRSSINDKIIELKDLVMGT---DAKMHKSGVLRKAIDYIKYLQQV 383
Query: 362 QQRAKELENRQKKLEHANRHLL 383
+ ++ EN KL + LL
Sbjct: 384 NHKLRQ-ENMVLKLANQKNKLL 404
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 51.6 bits (122), Expect = 2e-06
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 291 ELTESEARALAKERQK-KDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILK 349
E+TE+E + R+K ++ HN +ER R+ IN I +G LIP S P ++ +K IL
Sbjct: 3 EMTENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIPCS--PALKQSKNMILD 60
Query: 350 ASVDYIRKLQRE----------QQRAKELENRQKKLEHANR 380
+ YI +L+R+ ++A+E++ +K+LE +
Sbjct: 61 QAFKYITELKRQNDELLLNGGNNEQAEEIKKLRKQLEEIQK 101
Score = 29.3 bits (64), Expect = 9.1
Identities = 35/182 (19%), Positives = 72/182 (39%), Gaps = 35/182 (19%)
Query: 22 KTYYELKSQPL----KSSSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQ 77
+T + SQP + + +++H A + + + ++ + ++Q Q+Q++++QQ
Sbjct: 1415 QTEVQCGSQPSVAEQQQTQASQHLQALQQHVPAQGVSHLHSNHLYIKQQQQQQQQQQQQQ 1474
Query: 78 QKLQAAQF--------MQQRVPVSQTPA----------------INVSVPTTLPSATQVP 113
Q+ QA Q MQ VP +++ + + L TQ
Sbjct: 1475 QQQQAGQLRERHHLYQMQHHVPHAESSVHSQPHNVHQQRTLQQEVQMQKKRNLVQGTQTS 1534
Query: 114 MEVLKVQTHLENPTKY-------HIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGD 166
L+ + H + ++ H QQ Q+Q + + S+ N S N P +
Sbjct: 1535 QLSLQPKHHGTDQSRSKTGQPHPHHQQMQQQMQQHFGSSQTEKSCENPSTSRNHHNHPQN 1594
Query: 167 HV 168
H+
Sbjct: 1595 HL 1596
>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
isoform b [Homo sapiens]
Length = 582
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 286 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 345
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 14 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 69
Query: 346 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 385
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 70 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 110
>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 286 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 345
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
Query: 346 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 385
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 286 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 345
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
Query: 346 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 385
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 43.1 bits (100), Expect = 6e-04
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 302 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 361
K++ K+ + N E++RR N IKELG+++P + + +K T+L+ S+D++RK +
Sbjct: 31 KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGN---ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 362 QQRAKELENRQ 372
++ E RQ
Sbjct: 88 TAQSDASEIRQ 98
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 43.1 bits (100), Expect = 6e-04
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 58 LLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVL 117
LLRQQ ++Q Q+Q++++QQQ+ Q Q QQ+ TT S QVP
Sbjct: 2716 LLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ--------------TTTTSQVQVP---- 2757
Query: 118 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 177
++Q ++P Q+K T + Q L P QP PP SA
Sbjct: 2758 QIQGQAQSPA----------QIKAVGKLTPEHLIKMQKQKLQMPPQP-----PPPQAQSA 2802
Query: 178 PNSPMAMLTLNSN 190
P P A + + ++
Sbjct: 2803 PPQPTAQVQVQTS 2815
Score = 29.6 bits (65), Expect = 7.0
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 53 MTSRILLRQQLMREQMQEQERREQ-----QQKLQAAQFM----QQRVPVSQTPAINVSVP 103
M + L+QQ +++Q Q + Q QQK+ A Q QQ+V + PA+
Sbjct: 2926 MQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFL 2985
Query: 104 TTLPSATQVPMEVLKVQTHL-----------ENPTK--YHIQQAQRQQVKQYLSTTLANK 150
TT S Q +VQT + + P + A +Q Q ++ T A
Sbjct: 2986 TTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATA 3045
Query: 151 HANQVLSLP 159
QV +P
Sbjct: 3046 AGQQVQMIP 3054
>gi|5453734 MAD4 [Homo sapiens]
Length = 209
Score = 42.7 bits (99), Expect = 8e-04
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 290 RELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILK 349
RE T++ A + K + +HN +E+ RR + +++L L+P D R ++LK
Sbjct: 39 REKTKA-AGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD-STRHTTLSLLK 96
Query: 350 ASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQA 393
+ +I+KL+ + +RA + +++L+ +R L R+++L +Q+
Sbjct: 97 RAKVHIKKLEEQDRRALSI---KEQLQQEHRFLKRRLEQLSVQS 137
>gi|31745180 aryl hydrocarbon receptor nuclear translocator-like 2
[Homo sapiens]
Length = 636
Score = 42.4 bits (98), Expect = 0.001
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 302 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 361
K + ++ H+ E+RRR +N+ I+EL +IP+ N + +K T+L+ +V ++R L+
Sbjct: 104 KMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGL 163
Query: 362 QQRAKELENRQKKL-EHANRHLLLRIQE 388
R L ++ RHL+L+ E
Sbjct: 164 TNSYVGSNYRPSFLQDNELRHLILKTAE 191
>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
2 [Homo sapiens]
Length = 328
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 293 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 352
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 353 DYIRKLQ 359
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 293 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 352
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 353 DYIRKLQ 359
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 41.6 bits (96), Expect = 0.002
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 267 NQGLPPPGLTISNSCPANLPNI--KRELTESEARALAKERQKKDNHNLIERRRRFNINDR 324
++ PP S + P L ++ + + S + +++ +++ NHN++ER+RR ++
Sbjct: 341 SEDAPPQKKIKSEASPRPLKSVIPPKAKSLSPRNSDSEDSERRRNHNILERQRRNDLRSS 400
Query: 325 IKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQR----AKELENRQ----KKLE 376
L +P+ + + K ILK + +Y+ LQ E+ + ++L+ RQ KK+E
Sbjct: 401 FLTLRDHVPELVKNE-KAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIE 459
Query: 377 HA 378
HA
Sbjct: 460 HA 461
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 265 YGNQGLPPPGLTISNSCPAN---------------LPNIKRELTESEARALAK------E 303
Y + PPP + P++ LP SE R+ +
Sbjct: 172 YSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDH 231
Query: 304 RQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW----NKGTILKASVDYIRKLQ 359
R + +H ER R + +R + P D R+ ++G Y R +
Sbjct: 232 RHRDHSHGRGERHRSLDRRERGRS-----PDRRRQDSRYRSDYDRGRTPSRHRSYERSRE 286
Query: 360 REQQRAKELENRQK-KLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 417
RE++R + +NR+ LE + + +E + R++GLS++P C+P+L IIK
Sbjct: 287 RERERHRHRDNRRSPSLERSYK------KEYKRSGRSYGLSVVPEPAGCTPELPGEIIK 339
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 61 QQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ 120
Q++ + Q+Q+Q++++QQQ+ Q Q +Q + P+ Q P P P + L Q
Sbjct: 239 QRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPP---------PSQALPQQ 289
Query: 121 THLENPTKYHIQQAQRQQ--VKQYLSTTLANKHANQVLSLPCPNQPGD--HVMPPVPGSS 176
+ T++H Q QQ V Q + L + Q L PG + PP+
Sbjct: 290 LQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVR 349
Query: 177 AP 178
AP
Sbjct: 350 AP 351
Score = 35.8 bits (81), Expect = 0.097
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 30 QPLKSSSSAEHPGASKPPISSSSMTSRILLRQQLMREQM----QEQERREQQQKLQAAQF 85
QP+ S S PG S S ++ S + QL +Q+ Q+Q+++ QQQ+ A Q
Sbjct: 121 QPM-SLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQ 179
Query: 86 MQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLST 145
QQ+ Q A ++ + Q ++ + Q ++ K H Q Q+ Q +Q
Sbjct: 180 QQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQ 239
Query: 146 TLANKHANQ 154
+A Q
Sbjct: 240 RIAQLQLQQ 248
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,856,426
Number of Sequences: 37866
Number of extensions: 993816
Number of successful extensions: 7828
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 5727
Number of HSP's gapped (non-prelim): 1179
length of query: 520
length of database: 18,247,518
effective HSP length: 107
effective length of query: 413
effective length of database: 14,195,856
effective search space: 5862888528
effective search space used: 5862888528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.