Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 38156697
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38156697 microphthalmia-associated transcription factor
isoform 5 [Homo sapiens]
(413 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38156697 microphthalmia-associated transcription factor isofo... 833 0.0
gi|4557755 microphthalmia-associated transcription factor isofor... 827 0.0
gi|38156705 microphthalmia-associated transcription factor isofo... 810 0.0
gi|38156703 microphthalmia-associated transcription factor isofo... 810 0.0
gi|38156701 microphthalmia-associated transcription factor isofo... 810 0.0
gi|38156699 microphthalmia-associated transcription factor isofo... 810 0.0
gi|8659574 transcription factor E3 [Homo sapiens] 371 e-103
gi|24307933 transcription factor EB [Homo sapiens] 309 3e-84
gi|6912702 transcription factor EC isoform a [Homo sapiens] 284 9e-77
gi|64762402 transcription factor EC isoform b [Homo sapiens] 265 7e-71
gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens] 59 8e-09
gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens] 59 8e-09
gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens] 56 7e-08
gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens] 56 7e-08
gi|52630419 sterol regulatory element binding transcription fact... 54 2e-07
gi|22547195 sterol regulatory element binding transcription fact... 54 2e-07
gi|27477113 sterol regulatory element-binding transcription fact... 52 1e-06
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 52 1e-06
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ... 45 2e-04
gi|4758010 clock [Homo sapiens] 43 5e-04
gi|5453734 MAD4 [Homo sapiens] 43 6e-04
gi|31745180 aryl hydrocarbon receptor nuclear translocator-like ... 42 8e-04
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo... 42 8e-04
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 42 8e-04
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 42 0.001
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 42 0.001
gi|30795242 aryl hydrocarbon receptor nuclear translocator isofo... 40 0.003
gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens] 40 0.003
>gi|38156697 microphthalmia-associated transcription factor isoform
5 [Homo sapiens]
Length = 413
Score = 833 bits (2153), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH
Sbjct: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
Query: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI
Sbjct: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
Query: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN
Sbjct: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
Query: 181 IKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTI 240
IKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTI
Sbjct: 181 IKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTI 240
Query: 241 LKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLC 300
LKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLC
Sbjct: 241 LKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLC 300
Query: 301 SPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSV 360
SPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSV
Sbjct: 301 SPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSV 360
Query: 361 PTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
PTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 361 PTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
>gi|4557755 microphthalmia-associated transcription factor isoform 4
[Homo sapiens]
Length = 419
Score = 827 bits (2136), Expect = 0.0
Identities = 413/419 (98%), Positives = 413/419 (98%), Gaps = 6/419 (1%)
Query: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH
Sbjct: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
Query: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI
Sbjct: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
Query: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN
Sbjct: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
Query: 181 IKRELT------ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR 234
IKRELT ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR
Sbjct: 181 IKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR 240
Query: 235 WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI 294
WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI
Sbjct: 241 WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI 300
Query: 295 PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA 354
PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA
Sbjct: 301 PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA 360
Query: 355 NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 361 NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
>gi|38156705 microphthalmia-associated transcription factor isoform
6 [Homo sapiens]
Length = 495
Score = 810 bits (2093), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 93 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 152
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 153 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 212
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA
Sbjct: 213 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 272
Query: 191 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 250
RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK
Sbjct: 273 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 332
Query: 251 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 310
LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK
Sbjct: 333 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 392
Query: 311 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 370
QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED
Sbjct: 393 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 452
Query: 371 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 453 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 495
>gi|38156703 microphthalmia-associated transcription factor isoform
2 [Homo sapiens]
Length = 504
Score = 810 bits (2093), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 102 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 161
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 162 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 221
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA
Sbjct: 222 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 281
Query: 191 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 250
RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK
Sbjct: 282 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 341
Query: 251 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 310
LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK
Sbjct: 342 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 401
Query: 311 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 370
QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED
Sbjct: 402 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 461
Query: 371 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 462 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 504
>gi|38156701 microphthalmia-associated transcription factor isoform
3 [Homo sapiens]
Length = 519
Score = 810 bits (2093), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 117 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 176
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 177 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 236
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA
Sbjct: 237 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 296
Query: 191 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 250
RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK
Sbjct: 297 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 356
Query: 251 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 310
LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK
Sbjct: 357 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 416
Query: 311 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 370
QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED
Sbjct: 417 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 476
Query: 371 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 477 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 519
>gi|38156699 microphthalmia-associated transcription factor isoform
1 [Homo sapiens]
Length = 520
Score = 810 bits (2093), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 118 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 177
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 178 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 237
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA
Sbjct: 238 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEA 297
Query: 191 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 250
RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK
Sbjct: 298 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRK 357
Query: 251 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 310
LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK
Sbjct: 358 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 417
Query: 311 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 370
QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED
Sbjct: 418 QEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLED 477
Query: 371 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 478 ILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 520
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 371 bits (953), Expect = e-103
Identities = 227/445 (51%), Positives = 275/445 (61%), Gaps = 96/445 (21%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPG--- 67
+VQTHLENPT+YH+QQA+RQQVKQYLSTTL K A+Q L+ P PG P+P
Sbjct: 178 KVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPP----PGPASAQPLPAPEA 233
Query: 68 -------SSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
SAPNSPMA+LT+ S+ EKE +DDVI
Sbjct: 234 AHTTGPTGSAPNSPMALLTIGSSSEKE----------------------------IDDVI 265
Query: 121 DDIISLESSYNEEILGLMD---PALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPAN 177
D+IISLESSYN+E+L + LQ+ +TLPVSGNL+D+Y +QG+ P +T+SNSCPA
Sbjct: 266 DEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAE 325
Query: 178 LPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 237
LPNIKRE++E+EA+AL KERQKKDNHNLIERRRRFNINDRIKELGTLIPKS+DP+MRWNK
Sbjct: 326 LPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNK 385
Query: 238 GTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPST 297
GTILKASVDYIRKLQ+EQQR+K+LE+RQ+ LE ANR L LRIQELE+QA+ HGL + P+
Sbjct: 386 GTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTP 445
Query: 298 GLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQA 357
GL S + S L D+ + G TF ++G G N
Sbjct: 446 GLLS-----------LATTSASDSLKPEQLDI----EEEGRPGAATF--HVGGGPAQNAP 488
Query: 358 YSVPTKMGSK----------------------LEDILMDD-----------TLSPV-GVT 383
+ P S LEDILM++ LSP+ +
Sbjct: 489 HQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGALSPLRAAS 548
Query: 384 DPLLSSVSPGASKTSSRRSSMSMEE 408
DPLLSSVSP SK SSRRSS SMEE
Sbjct: 549 DPLLSSVSPAVSKASSRRSSFSMEE 573
>gi|24307933 transcription factor EB [Homo sapiens]
Length = 476
Score = 309 bits (792), Expect = 3e-84
Identities = 196/437 (44%), Positives = 260/437 (59%), Gaps = 74/437 (16%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSL------PCPNQPG---DHV 61
+VQ++LENPT YH+QQ+Q Q+V++YLS T NK A + P PG HV
Sbjct: 71 KVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPPPAASPGVRAGHV 130
Query: 62 MPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVID 121
+ G+SAPNSPMAML + SN E+E +DDVID
Sbjct: 131 LSSSAGNSAPNSPMAMLHIGSNPERE----------------------------LDDVID 162
Query: 122 DIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLT--ISNSCPANLP 179
+I+ L+ ++LG ++P +QM NTLP+S + +++Y + L S+SCPA+L
Sbjct: 163 NIMRLD-----DVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLT 217
Query: 180 NIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGT 239
KRELT++E+RALAKERQKKDNHNLIERRRRFNINDRIKELG LIPK+ND D+RWNKGT
Sbjct: 218 Q-KRELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGT 276
Query: 240 ILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGL 299
ILKASVDYIR++Q++ Q+++ELEN ++LE N+ L LRIQELEMQAR HGL +G+
Sbjct: 277 ILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGM 336
Query: 300 CSPDLVNRIIKQE-PVLENCSQDL--------------LQHHADLTCTTTLDLTDGTITF 344
+L +++KQE P E + L L A L T + F
Sbjct: 337 NMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLPTQPPSPFHHLDF 396
Query: 345 NNNLGTG---TEANQAYSVPTKMG----------SKLEDILMDDTLSPVGVTDPLLSSVS 391
+++L G E Y P G L+ +L+DD+L P+ +DPLLS++S
Sbjct: 397 SHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLPL-ASDPLLSTMS 455
Query: 392 PGASKTSSRRSSMSMEE 408
P ASK SSRRSS SMEE
Sbjct: 456 PEASKASSRRSSFSMEE 472
>gi|6912702 transcription factor EC isoform a [Homo sapiens]
Length = 347
Score = 284 bits (727), Expect = 9e-77
Identities = 171/296 (57%), Positives = 214/296 (72%), Gaps = 16/296 (5%)
Query: 116 MDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLY-GNQGLPP--PGLTISN 172
M+DVI+DII +ESS+ EE D L M TL SG+++D+Y G QG+ P GLT S
Sbjct: 61 MEDVIEDIIGMESSFKEEGA---DSPLLMQRTL--SGSILDVYSGEQGISPINMGLT-SA 114
Query: 173 SCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPD 232
SCP++LP +KRE+TE++ RALAKERQKKDNHNLIERRRR+NIN RIKELGTLIPKSNDPD
Sbjct: 115 SCPSSLP-MKREITETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPD 173
Query: 233 MRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLS 292
MRWNKGTILKASV+YI+ LQ+EQQRA+ELE+RQKKLE ANR LLLRIQELE+QAR HGL
Sbjct: 174 MRWNKGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLP 233
Query: 293 LIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGT 352
+ S G + DL + KQ+ E S D Q ++ + +L D I F++ L T
Sbjct: 234 TLASLG--TVDLGAHVTKQQSHPEQNSVDYCQQ-LTVSQGPSPELCDQAIAFSDPLSYFT 290
Query: 353 EANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEE 408
+ + +S K +L+ +L+DDT+SP G TDPLLS+ SP SK SSRRSS S ++
Sbjct: 291 DLS--FSAALKEEQRLDGMLLDDTISPFG-TDPLLSATSPAVSKESSRRSSFSSDD 343
>gi|64762402 transcription factor EC isoform b [Homo sapiens]
Length = 318
Score = 265 bits (676), Expect = 7e-71
Identities = 154/262 (58%), Positives = 194/262 (74%), Gaps = 11/262 (4%)
Query: 150 VSGNLIDLY-GNQGLPP--PGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLI 206
+SG+++D+Y G QG+ P GLT S SCP++LP +KRE+TE++ RALAKERQKKDNHNLI
Sbjct: 61 LSGSILDVYSGEQGISPINMGLT-SASCPSSLP-MKREITETDTRALAKERQKKDNHNLI 118
Query: 207 ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQK 266
ERRRR+NIN RIKELGTLIPKSNDPDMRWNKGTILKASV+YI+ LQ+EQQRA+ELE+RQK
Sbjct: 119 ERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQRARELEHRQK 178
Query: 267 KLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHH 326
KLE ANR LLLRIQELE+QAR HGL + S G + DL + KQ+ E S D Q
Sbjct: 179 KLEQANRRLLLRIQELEIQARTHGLPTLASLG--TVDLGAHVTKQQSHPEQNSVDYCQQ- 235
Query: 327 ADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPL 386
++ + +L D I F++ L T+ + +S K +L+ +L+DDT+SP G TDPL
Sbjct: 236 LTVSQGPSPELCDQAIAFSDPLSYFTDLS--FSAALKEEQRLDGMLLDDTISPFG-TDPL 292
Query: 387 LSSVSPGASKTSSRRSSMSMEE 408
LS+ SP SK SSRRSS S ++
Sbjct: 293 LSATSPAVSKESSRRSSFSSDD 314
>gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
Length = 279
Score = 58.9 bits (141), Expect = 8e-09
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 195 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 252
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 165 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 224
Query: 253 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 294
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 225 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 273
>gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]
Length = 346
Score = 58.9 bits (141), Expect = 8e-09
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 195 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 252
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 232 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 291
Query: 253 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 294
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 292 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 340
>gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]
Length = 310
Score = 55.8 bits (133), Expect = 7e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 187 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 244
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
Query: 245 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 292
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
Query: 293 LI 294
++
Sbjct: 303 VV 304
>gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]
Length = 251
Score = 55.8 bits (133), Expect = 7e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 187 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 244
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
Query: 245 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 292
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
Query: 293 LI 294
++
Sbjct: 244 VV 245
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 54.3 bits (129), Expect = 2e-07
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 181 IKRELTESEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGT 239
I R S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK
Sbjct: 335 INRLAAGSKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSA 391
Query: 240 ILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL 275
+L+ ++DYIR LQ Q+ K+ + H ++ L
Sbjct: 392 VLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSL 427
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 54.3 bits (129), Expect = 2e-07
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 181 IKRELTESEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGT 239
I R S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK
Sbjct: 305 INRLAAGSKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSA 361
Query: 240 ILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL 275
+L+ ++DYIR LQ Q+ K+ + H ++ L
Sbjct: 362 VLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSL 397
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 52.0 bits (123), Expect = 1e-06
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 195 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 254
KE +++ HN+IE+R R +IND+I EL L+ + D + +K +L+ ++DYI+ LQ+
Sbjct: 327 KEGERRTTHNIIEKRYRSSINDKIIELKDLVMGT---DAKMHKSGVLRKAIDYIKYLQQV 383
Query: 255 QQRAKELENRQKKLEHANRHLL 276
+ ++ EN KL + LL
Sbjct: 384 NHKLRQ-ENMVLKLANQKNKLL 404
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 51.6 bits (122), Expect = 1e-06
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 184 ELTESEARALAKERQK-KDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILK 242
E+TE+E + R+K ++ HN +ER R+ IN I +G LIP S P ++ +K IL
Sbjct: 3 EMTENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIPCS--PALKQSKNMILD 60
Query: 243 ASVDYIRKLQRE----------QQRAKELENRQKKLEHANR 273
+ YI +L+R+ ++A+E++ +K+LE +
Sbjct: 61 QAFKYITELKRQNDELLLNGGNNEQAEEIKKLRKQLEEIQK 101
>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
isoform b [Homo sapiens]
Length = 582
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 179 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 238
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 14 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 69
Query: 239 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 278
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 70 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 110
>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 179 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 238
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
Query: 239 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 278
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 179 PNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 238
P+ + E TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct: 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
Query: 239 TILKASVDYIRKLQREQQRAKELENRQKKL-EHANRHLLLR 278
T+L+ +V +++ L+ E + L + +HL+LR
Sbjct: 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 43.1 bits (100), Expect = 5e-04
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 195 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 254
K++ K+ + N E++RR N IKELG+++P + + +K T+L+ S+D++RK +
Sbjct: 31 KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGN---ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 255 QQRAKELENRQ 265
++ E RQ
Sbjct: 88 TAQSDASEIRQ 98
>gi|5453734 MAD4 [Homo sapiens]
Length = 209
Score = 42.7 bits (99), Expect = 6e-04
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 183 RELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILK 242
RE T++ A + K + +HN +E+ RR + +++L L+P D R ++LK
Sbjct: 39 REKTKA-AGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD-STRHTTLSLLK 96
Query: 243 ASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQA 286
+ +I+KL+ + +RA + +++L+ +R L R+++L +Q+
Sbjct: 97 RAKVHIKKLEEQDRRALSI---KEQLQQEHRFLKRRLEQLSVQS 137
>gi|31745180 aryl hydrocarbon receptor nuclear translocator-like 2
[Homo sapiens]
Length = 636
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 195 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 254
K + ++ H+ E+RRR +N+ I+EL +IP+ N + +K T+L+ +V ++R L+
Sbjct: 104 KMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGL 163
Query: 255 QQRAKELENRQKKL-EHANRHLLLRIQE 281
R L ++ RHL+L+ E
Sbjct: 164 TNSYVGSNYRPSFLQDNELRHLILKTAE 191
>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
2 [Homo sapiens]
Length = 328
Score = 42.4 bits (98), Expect = 8e-04
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 186 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 245
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 246 DYIRKLQ 252
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 42.4 bits (98), Expect = 8e-04
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 186 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 245
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 246 DYIRKLQ 252
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 160 NQGLPPPGLTISNSCPANLPNI--KRELTESEARALAKERQKKDNHNLIERRRRFNINDR 217
++ PP S + P L ++ + + S + +++ +++ NHN++ER+RR ++
Sbjct: 341 SEDAPPQKKIKSEASPRPLKSVIPPKAKSLSPRNSDSEDSERRRNHNILERQRRNDLRSS 400
Query: 218 IKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQR----AKELENRQ----KKLE 269
L +P+ + + K ILK + +Y+ LQ E+ + ++L+ RQ KK+E
Sbjct: 401 FLTLRDHVPELVKNE-KAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIE 459
Query: 270 HA 271
HA
Sbjct: 460 HA 461
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 158 YGNQGLPPPGLTISNSCPAN---------------LPNIKRELTESEARALAK------E 196
Y + PPP + P++ LP SE R+ +
Sbjct: 172 YSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDH 231
Query: 197 RQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW----NKGTILKASVDYIRKLQ 252
R + +H ER R + +R + P D R+ ++G Y R +
Sbjct: 232 RHRDHSHGRGERHRSLDRRERGRS-----PDRRRQDSRYRSDYDRGRTPSRHRSYERSRE 286
Query: 253 REQQRAKELENRQK-KLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 310
RE++R + +NR+ LE + + +E + R++GLS++P C+P+L IIK
Sbjct: 287 RERERHRHRDNRRSPSLERSYK------KEYKRSGRSYGLSVVPEPAGCTPELPGEIIK 339
>gi|30795242 aryl hydrocarbon receptor nuclear translocator isoform
3 [Homo sapiens]
Length = 774
Score = 40.4 bits (93), Expect = 0.003
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 195 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ 252
KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V +++ L+
Sbjct: 71 KERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLR 128
>gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens]
Length = 193
Score = 40.4 bits (93), Expect = 0.003
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 174 CPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDM 233
CP P + +A + + HN +E+RRR + ++ L +P D
Sbjct: 33 CPHRSPGPIHRRKKRPPQAPGAQDSGRSVHNELEKRRRAQLKRCLERLKQQMPLGADC-A 91
Query: 234 RWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGL-- 291
R+ ++L+ + +I+KL+ ++QRA++L+ R + + + + L +++ L A L
Sbjct: 92 RYTTLSLLRRARMHIQKLEDQEQRARQLKERLRSKQQSLQRQLEQLRGLAGAAERERLRA 151
Query: 292 SLIPSTGLCS 301
+ S+GL S
Sbjct: 152 DSLDSSGLSS 161
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,639,442
Number of Sequences: 37866
Number of extensions: 780667
Number of successful extensions: 3578
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 3398
Number of HSP's gapped (non-prelim): 297
length of query: 413
length of database: 18,247,518
effective HSP length: 105
effective length of query: 308
effective length of database: 14,271,588
effective search space: 4395649104
effective search space used: 4395649104
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.