Guide to the Human Genome
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Name: NR2C2 Sequence: fasta or formatted (615aa) NCBI GI: 36950991
Description:

nuclear receptor subfamily 2, group C, member 2

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         43           2
 C cysteine            2.4         15           1
 D aspartate           5.4         33           1
 E glutamate           5.5         34           2
 F phenylalanine       2.9         18           2
 G glycine             5.9         36           3
 H histidine           1.6         10           2
 I isoleucine          7.2         44           2
 K lysine              5.2         32           2
 L leucine             9.4         58           2
 M methionine          2.3         14           1
 N asparagine          3.6         22           2
 P proline             4.6         28           1
 Q glutamine           6.2         38           2
 R arginine            4.6         28           1
 S serine             10.7         66           4
 T threonine           7.2         44           2
 V valine              5.7         35           2
 W tryptophan          0.5          3           1
 Y tyrosine            2.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor subfamily 2, group C, member 2 [Hom... 
NR2C1                 0.576   nuclear receptor subfamily 2, group C, member 1 iso...
NR2C1                 0.405   nuclear receptor subfamily 2, group C, member 1 iso...
NR2C1                 0.403   nuclear receptor subfamily 2, group C, member 1 isof...
NR2F1                 0.105   nuclear receptor subfamily 2, group F, member 1 [Homo...
NR2F2                 0.102   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.102   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.102   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.102   nuclear receptor subfamily 2, group F, member 2 isof...
RXRG                  0.094   retinoid X receptor, gamma isoform a 
RXRA                  0.092   retinoid X receptor, alpha 
NR2F6                 0.092   nuclear receptor subfamily 2, group F, member 6 [Hom...
RXRB                  0.085   retinoid X receptor, beta 
RORB                  0.084   RAR-related orphan receptor B 
HNF4A                 0.082   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.082   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.082   hepatocyte nuclear factor 4 alpha isoform b 
HNF4A                 0.082   hepatocyte nuclear factor 4 alpha isoform f 
HNF4A                 0.082   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.082   hepatocyte nuclear factor 4 alpha isoform d 
RARG                  0.082   retinoic acid receptor, gamma isoform 1 
RARA                  0.082   retinoic acid receptor, alpha isoform 1 
RARA                  0.082   retinoic acid receptor, alpha isoform 1 
NR2E1                 0.082   nuclear receptor subfamily 2, group E, member 1 [Homo...
RARB                  0.080   retinoic acid receptor, beta isoform 1 
RARA                  0.079   retinoic acid receptor, alpha isoform 2 
RARG                  0.079   retinoic acid receptor, gamma isoform 2 
HNF4G                 0.078   hepatocyte nuclear factor 4, gamma 
RORC                  0.073   RAR-related orphan receptor C isoform a 
RORC                  0.073   RAR-related orphan receptor C isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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