RORB 11511

Name: RORB	Sequence: fasta or formatted (459aa)		NCBI GI: 19743907
Description: RAR-related orphan receptor B		Referenced in: Circadian Rhythms Nuclear Receptors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 29 1 C cysteine 3.9 18 1 D aspartate 3.9 18 2 E glutamate 6.5 30 3 F phenylalanine 3.7 17 2 G glycine 5.4 25 2 H histidine 2.6 12 1 I isoleucine 6.8 31 2 K lysine 6.3 29 2 L leucine 9.6 44 3 M methionine 2.2 10 1 N asparagine 5.4 25 2 P proline 3.5 16 2 Q glutamine 8.5 39 3 R arginine 4.8 22 2 S serine 7.0 32 3 T threonine 4.8 22 1 V valine 4.6 21 2 W tryptophan 0.7 3 1 Y tyrosine 3.5 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAR-related orphan receptor B RORA 0.616 RAR-related orphan receptor A isoform d RORA 0.615 RAR-related orphan receptor A isoform b RORA 0.614 RAR-related orphan receptor A isoform c RORA 0.612 RAR-related orphan receptor A isoform a RORC 0.453 RAR-related orphan receptor C isoform b RORC 0.450 RAR-related orphan receptor C isoform a NR1D2 0.124 nuclear receptor subfamily 1, group D, member 2 iso... NR1D2 0.124 nuclear receptor subfamily 1, group D, member 2 iso... NR1D1 0.119 nuclear receptor subfamily 1, group D, member 1 [Hom... NR5A2 0.112 nuclear receptor subfamily 5, group A, member 2 isof... NR5A2 0.112 nuclear receptor subfamily 5, group A, member 2 isofo... NR2C2 0.110 nuclear receptor subfamily 2, group C, member 2 [Hom... RARG 0.103 retinoic acid receptor, gamma isoform 2 RARG 0.103 retinoic acid receptor, gamma isoform 1 RARB 0.101 retinoic acid receptor, beta isoform 1 RARA 0.101 retinoic acid receptor, alpha isoform 1 RARA 0.101 retinoic acid receptor, alpha isoform 2 RARA 0.101 retinoic acid receptor, alpha isoform 1 NR6A1 0.099 nuclear receptor subfamily 6, group A, member 1 isof... NR2F2 0.099 nuclear receptor subfamily 2, group F, member 2 isof... NR6A1 0.099 nuclear receptor subfamily 6, group A, member 1 isof... PPARA 0.098 peroxisome proliferative activated receptor, alpha [... PPARA 0.098 peroxisome proliferative activated receptor, alpha [H... PPARG 0.098 peroxisome proliferative activated receptor gamma i... PPARG 0.098 peroxisome proliferative activated receptor gamma is... PPARG 0.098 peroxisome proliferative activated receptor gamma i... PPARG 0.098 peroxisome proliferative activated receptor gamma i... NR2F1 0.097 nuclear receptor subfamily 2, group F, member 1 [Homo... RXRA 0.096 retinoid X receptor, alpha Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.