HNF4A 35227

Name: HNF4A	Sequence: fasta or formatted (442aa)		NCBI GI: 71725341
Description: hepatocyte nuclear factor 4 alpha isoform e		Referenced in: Liver Nuclear Receptors
Other entries for this name: alt prot [474aa] hepatocyte nuclear factor 4 alpha isoform b alt prot [464aa] hepatocyte nuclear factor 4 alpha isoform a alt prot [417aa] hepatocyte nuclear factor 4 alpha isoform c alt prot [395aa] hepatocyte nuclear factor 4 alpha isoform f alt prot [452aa] hepatocyte nuclear factor 4 alpha isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 31 1 C cysteine 2.7 12 1 D aspartate 5.4 24 2 E glutamate 5.4 24 1 F phenylalanine 2.7 12 2 G glycine 6.1 27 2 H histidine 2.7 12 2 I isoleucine 6.1 27 2 K lysine 5.4 24 2 L leucine 10.9 48 5 M methionine 2.9 13 1 N asparagine 3.6 16 1 P proline 6.6 29 2 Q glutamine 5.0 22 1 R arginine 5.9 26 2 S serine 8.8 39 2 T threonine 3.6 16 1 V valine 5.9 26 2 W tryptophan 0.5 2 1 Y tyrosine 2.7 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatocyte nuclear factor 4 alpha isoform e HNF4A 0.988 hepatocyte nuclear factor 4 alpha isoform d HNF4A 0.964 hepatocyte nuclear factor 4 alpha isoform a HNF4A 0.954 hepatocyte nuclear factor 4 alpha isoform b HNF4A 0.794 hepatocyte nuclear factor 4 alpha isoform f HNF4A 0.759 hepatocyte nuclear factor 4 alpha isoform c HNF4G 0.684 hepatocyte nuclear factor 4, gamma RXRA 0.281 retinoid X receptor, alpha RXRG 0.273 retinoid X receptor, gamma isoform a RXRB 0.273 retinoid X receptor, beta NR2F6 0.236 nuclear receptor subfamily 2, group F, member 6 [Hom... NR2F2 0.229 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.225 nuclear receptor subfamily 2, group F, member 1 [Homo... ESRRB 0.184 estrogen-related receptor beta NR2E3 0.184 photoreceptor-specific nuclear receptor isoform b [Ho... ESRRG 0.177 estrogen-related receptor gamma isoform 2 ESRRG 0.177 estrogen-related receptor gamma isoform 2 ESRRG 0.177 estrogen-related receptor gamma isoform 1 ESRRG 0.177 estrogen-related receptor gamma isoform 2 NR2E1 0.176 nuclear receptor subfamily 2, group E, member 1 [Homo... RARB 0.167 retinoic acid receptor, beta isoform 1 ESRRA 0.159 estrogen-related receptor alpha RARA 0.157 retinoic acid receptor, alpha isoform 1 RARA 0.157 retinoic acid receptor, alpha isoform 2 RARA 0.157 retinoic acid receptor, alpha isoform 1 RARG 0.156 retinoic acid receptor, gamma isoform 2 RARG 0.156 retinoic acid receptor, gamma isoform 1 NR2E3 0.150 photoreceptor-specific nuclear receptor isoform a [Ho... NR4A2 0.139 nuclear receptor subfamily 4, group A, member 2 [Homo... THRB 0.138 thyroid hormone receptor, beta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.