Guide to the Human Genome
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Name: RXRG Sequence: fasta or formatted (463aa) NCBI GI: 5902068
Description:

retinoid X receptor, gamma isoform a

Referenced in:

Nuclear Receptors

Other entries for this name:
alt prot [33aa] retinoid X receptor, gamma isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         32           2
 C cysteine            2.8         13           1
 D aspartate           4.5         21           1
 E glutamate           6.3         29           2
 F phenylalanine       3.0         14           3
 G glycine             7.3         34           2
 H histidine           2.8         13           1
 I isoleucine          4.5         21           1
 K lysine              5.4         25           1
 L leucine             9.9         46           3
 M methionine          3.5         16           1
 N asparagine          3.5         16           1
 P proline             6.7         31           2
 Q glutamine           2.8         13           1
 R arginine            5.6         26           1
 S serine              9.7         45           3
 T threonine           5.6         26           1
 V valine              5.4         25           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   retinoid X receptor, gamma isoform a 
RXRA                  0.672   retinoid X receptor, alpha 
RXRB                  0.606   retinoid X receptor, beta 
NR2F1                 0.278   nuclear receptor subfamily 2, group F, member 1 [Homo...
NR2F2                 0.277   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F6                 0.270   nuclear receptor subfamily 2, group F, member 6 [Hom...
HNF4A                 0.258   hepatocyte nuclear factor 4 alpha isoform f 
HNF4A                 0.258   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.258   hepatocyte nuclear factor 4 alpha isoform d 
HNF4A                 0.256   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.256   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.256   hepatocyte nuclear factor 4 alpha isoform b 
HNF4G                 0.254   hepatocyte nuclear factor 4, gamma 
RARG                  0.217   retinoic acid receptor, gamma isoform 2 
RARB                  0.216   retinoic acid receptor, beta isoform 1 
RARG                  0.214   retinoic acid receptor, gamma isoform 1 
NR2E3                 0.214   photoreceptor-specific nuclear receptor isoform b [Ho...
ESRRG                 0.211   estrogen-related receptor gamma isoform 2 
ESRRG                 0.211   estrogen-related receptor gamma isoform 2 
ESRRG                 0.211   estrogen-related receptor gamma isoform 1 
ESRRG                 0.211   estrogen-related receptor gamma isoform 2 
RARA                  0.210   retinoic acid receptor, alpha isoform 1 
RARA                  0.210   retinoic acid receptor, alpha isoform 2 
RARA                  0.210   retinoic acid receptor, alpha isoform 1 
ESRRB                 0.206   estrogen-related receptor beta 
NR2E1                 0.202   nuclear receptor subfamily 2, group E, member 1 [Homo...
ESRRA                 0.187   estrogen-related receptor alpha 
NR2E3                 0.174   photoreceptor-specific nuclear receptor isoform a [Ho...
NR4A1                 0.171   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR4A1                 0.171   nuclear receptor subfamily 4, group A, member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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