HNF4A 25344

Name: HNF4A	Sequence: fasta or formatted (474aa)		NCBI GI: 31077205
Description: hepatocyte nuclear factor 4 alpha isoform b		Referenced in: Liver Nuclear Receptors
Other entries for this name: alt prot [464aa] hepatocyte nuclear factor 4 alpha isoform a alt prot [417aa] hepatocyte nuclear factor 4 alpha isoform c alt prot [395aa] hepatocyte nuclear factor 4 alpha isoform f alt prot [452aa] hepatocyte nuclear factor 4 alpha isoform d alt prot [442aa] hepatocyte nuclear factor 4 alpha isoform e
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 35 2 C cysteine 2.7 13 1 D aspartate 5.9 28 2 E glutamate 5.5 26 1 F phenylalanine 2.7 13 2 G glycine 5.9 28 2 H histidine 2.5 12 2 I isoleucine 5.7 27 2 K lysine 5.3 25 2 L leucine 11.0 52 5 M methionine 3.4 16 1 N asparagine 3.6 17 1 P proline 6.3 30 2 Q glutamine 5.1 24 1 R arginine 6.1 29 2 S serine 7.8 37 2 T threonine 4.2 20 2 V valine 5.5 26 2 W tryptophan 0.6 3 1 Y tyrosine 2.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatocyte nuclear factor 4 alpha isoform b HNF4A 0.963 hepatocyte nuclear factor 4 alpha isoform a HNF4A 0.922 hepatocyte nuclear factor 4 alpha isoform d HNF4A 0.885 hepatocyte nuclear factor 4 alpha isoform e HNF4A 0.783 hepatocyte nuclear factor 4 alpha isoform c HNF4A 0.705 hepatocyte nuclear factor 4 alpha isoform f HNF4G 0.663 hepatocyte nuclear factor 4, gamma RXRA 0.258 retinoid X receptor, alpha RXRB 0.253 retinoid X receptor, beta RXRG 0.251 retinoid X receptor, gamma isoform a NR2F6 0.219 nuclear receptor subfamily 2, group F, member 6 [Hom... NR2F2 0.213 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.208 nuclear receptor subfamily 2, group F, member 1 [Homo... ESRRB 0.171 estrogen-related receptor beta NR2E3 0.171 photoreceptor-specific nuclear receptor isoform b [Ho... ESRRG 0.164 estrogen-related receptor gamma isoform 2 ESRRG 0.164 estrogen-related receptor gamma isoform 2 ESRRG 0.164 estrogen-related receptor gamma isoform 1 ESRRG 0.164 estrogen-related receptor gamma isoform 2 NR2E1 0.163 nuclear receptor subfamily 2, group E, member 1 [Homo... RARB 0.154 retinoic acid receptor, beta isoform 1 ESRRA 0.147 estrogen-related receptor alpha RARA 0.146 retinoic acid receptor, alpha isoform 1 RARA 0.146 retinoic acid receptor, alpha isoform 2 RARA 0.146 retinoic acid receptor, alpha isoform 1 RARG 0.146 retinoic acid receptor, gamma isoform 1 RARG 0.145 retinoic acid receptor, gamma isoform 2 NR2E3 0.140 photoreceptor-specific nuclear receptor isoform a [Ho... NR4A2 0.129 nuclear receptor subfamily 4, group A, member 2 [Homo... THRB 0.128 thyroid hormone receptor, beta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.