RORC 30941

Name: RORC	Sequence: fasta or formatted (497aa)		NCBI GI: 48255918
Description: RAR-related orphan receptor C isoform b		Referenced in: Nuclear Receptors
Other entries for this name: alt prot [518aa] RAR-related orphan receptor C isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 33 2 C cysteine 4.2 21 1 D aspartate 2.8 14 1 E glutamate 7.4 37 2 F phenylalanine 3.8 19 2 G glycine 7.2 36 2 H histidine 3.8 19 3 I isoleucine 3.4 17 1 K lysine 5.0 25 2 L leucine 10.9 54 2 M methionine 1.8 9 1 N asparagine 2.4 12 2 P proline 5.2 26 2 Q glutamine 7.0 35 5 R arginine 7.2 36 2 S serine 8.9 44 2 T threonine 4.0 20 1 V valine 4.4 22 2 W tryptophan 0.4 2 1 Y tyrosine 3.2 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAR-related orphan receptor C isoform b RORC 0.995 RAR-related orphan receptor C isoform a RORA 0.436 RAR-related orphan receptor A isoform d RORA 0.435 RAR-related orphan receptor A isoform b RORA 0.434 RAR-related orphan receptor A isoform c RORA 0.434 RAR-related orphan receptor A isoform a RORB 0.415 RAR-related orphan receptor B NR1D1 0.196 nuclear receptor subfamily 1, group D, member 1 [Hom... NR1D2 0.106 nuclear receptor subfamily 1, group D, member 2 iso... NR1D2 0.106 nuclear receptor subfamily 1, group D, member 2 iso... PPARG 0.092 peroxisome proliferative activated receptor gamma i... PPARG 0.092 peroxisome proliferative activated receptor gamma is... PPARG 0.092 peroxisome proliferative activated receptor gamma i... PPARG 0.092 peroxisome proliferative activated receptor gamma i... NR2F2 0.092 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.091 nuclear receptor subfamily 2, group F, member 1 [Homo... RARG 0.091 retinoic acid receptor, gamma isoform 2 RARG 0.091 retinoic acid receptor, gamma isoform 1 RARB 0.090 retinoic acid receptor, beta isoform 1 RARA 0.089 retinoic acid receptor, alpha isoform 1 RARA 0.089 retinoic acid receptor, alpha isoform 2 RARA 0.089 retinoic acid receptor, alpha isoform 1 NR2C1 0.088 nuclear receptor subfamily 2, group C, member 1 iso... RXRB 0.087 retinoid X receptor, beta NR2C2 0.087 nuclear receptor subfamily 2, group C, member 2 [Hom... PPARA 0.087 peroxisome proliferative activated receptor, alpha [... PPARA 0.087 peroxisome proliferative activated receptor, alpha [H... RXRA 0.086 retinoid X receptor, alpha NR4A3 0.085 nuclear receptor subfamily 4, group A, member 3 isof... NR4A3 0.085 nuclear receptor subfamily 4, group A, member 3 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.