HNF4A 35225

Name: HNF4A	Sequence: fasta or formatted (395aa)		NCBI GI: 71725336
Description: hepatocyte nuclear factor 4 alpha isoform f		Referenced in: Liver Nuclear Receptors
Other entries for this name: alt prot [474aa] hepatocyte nuclear factor 4 alpha isoform b alt prot [464aa] hepatocyte nuclear factor 4 alpha isoform a alt prot [417aa] hepatocyte nuclear factor 4 alpha isoform c alt prot [452aa] hepatocyte nuclear factor 4 alpha isoform d alt prot [442aa] hepatocyte nuclear factor 4 alpha isoform e
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 28 1 C cysteine 3.5 14 1 D aspartate 6.3 25 2 E glutamate 5.3 21 1 F phenylalanine 3.3 13 2 G glycine 6.6 26 2 H histidine 1.5 6 1 I isoleucine 5.6 22 2 K lysine 5.3 21 2 L leucine 11.4 45 5 M methionine 2.3 9 1 N asparagine 3.3 13 1 P proline 4.8 19 1 Q glutamine 5.1 20 1 R arginine 7.3 29 2 S serine 9.6 38 2 T threonine 2.3 9 1 V valine 5.8 23 2 W tryptophan 0.8 3 1 Y tyrosine 2.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatocyte nuclear factor 4 alpha isoform f HNF4A 0.961 hepatocyte nuclear factor 4 alpha isoform c HNF4A 0.893 hepatocyte nuclear factor 4 alpha isoform e HNF4A 0.893 hepatocyte nuclear factor 4 alpha isoform d HNF4A 0.854 hepatocyte nuclear factor 4 alpha isoform a HNF4A 0.854 hepatocyte nuclear factor 4 alpha isoform b HNF4G 0.685 hepatocyte nuclear factor 4, gamma RXRA 0.315 retinoid X receptor, alpha RXRG 0.307 retinoid X receptor, gamma isoform a RXRB 0.306 retinoid X receptor, beta NR2F6 0.262 nuclear receptor subfamily 2, group F, member 6 [Hom... NR2F2 0.254 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.249 nuclear receptor subfamily 2, group F, member 1 [Homo... NR2E3 0.207 photoreceptor-specific nuclear receptor isoform b [Ho... ESRRB 0.204 estrogen-related receptor beta ESRRG 0.199 estrogen-related receptor gamma isoform 2 ESRRG 0.199 estrogen-related receptor gamma isoform 2 ESRRG 0.199 estrogen-related receptor gamma isoform 1 ESRRG 0.199 estrogen-related receptor gamma isoform 2 NR2E1 0.198 nuclear receptor subfamily 2, group E, member 1 [Homo... RARB 0.184 retinoic acid receptor, beta isoform 1 ESRRA 0.178 estrogen-related receptor alpha RARA 0.177 retinoic acid receptor, alpha isoform 1 RARA 0.177 retinoic acid receptor, alpha isoform 2 RARA 0.177 retinoic acid receptor, alpha isoform 1 RARG 0.174 retinoic acid receptor, gamma isoform 2 RARG 0.174 retinoic acid receptor, gamma isoform 1 NR2E3 0.169 photoreceptor-specific nuclear receptor isoform a [Ho... THRB 0.155 thyroid hormone receptor, beta THRB 0.155 thyroid hormone receptor, beta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.