HNF4A 25346

Name: HNF4A	Sequence: fasta or formatted (417aa)		NCBI GI: 31077209
Description: hepatocyte nuclear factor 4 alpha isoform c		Referenced in: Liver Nuclear Receptors
Other entries for this name: alt prot [474aa] hepatocyte nuclear factor 4 alpha isoform b alt prot [464aa] hepatocyte nuclear factor 4 alpha isoform a alt prot [395aa] hepatocyte nuclear factor 4 alpha isoform f alt prot [452aa] hepatocyte nuclear factor 4 alpha isoform d alt prot [442aa] hepatocyte nuclear factor 4 alpha isoform e
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 30 2 C cysteine 3.4 14 1 D aspartate 7.0 29 2 E glutamate 5.3 22 1 F phenylalanine 3.4 14 2 G glycine 6.2 26 2 H histidine 1.4 6 1 I isoleucine 5.3 22 2 K lysine 5.3 22 2 L leucine 11.8 49 5 M methionine 2.9 12 1 N asparagine 3.4 14 1 P proline 4.3 18 1 Q glutamine 5.0 21 1 R arginine 7.2 30 2 S serine 8.9 37 2 T threonine 3.1 13 2 V valine 5.5 23 2 W tryptophan 0.7 3 1 Y tyrosine 2.9 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatocyte nuclear factor 4 alpha isoform c HNF4A 0.910 hepatocyte nuclear factor 4 alpha isoform f HNF4A 0.899 hepatocyte nuclear factor 4 alpha isoform a HNF4A 0.899 hepatocyte nuclear factor 4 alpha isoform b HNF4A 0.809 hepatocyte nuclear factor 4 alpha isoform e HNF4A 0.809 hepatocyte nuclear factor 4 alpha isoform d HNF4G 0.692 hepatocyte nuclear factor 4, gamma RXRA 0.293 retinoid X receptor, alpha RXRB 0.290 retinoid X receptor, beta RXRG 0.289 retinoid X receptor, gamma isoform a NR2F6 0.248 nuclear receptor subfamily 2, group F, member 6 [Hom... NR2F2 0.240 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.236 nuclear receptor subfamily 2, group F, member 1 [Homo... NR2E3 0.196 photoreceptor-specific nuclear receptor isoform b [Ho... ESRRB 0.192 estrogen-related receptor beta ESRRG 0.189 estrogen-related receptor gamma isoform 2 ESRRG 0.189 estrogen-related receptor gamma isoform 2 ESRRG 0.189 estrogen-related receptor gamma isoform 1 ESRRG 0.189 estrogen-related receptor gamma isoform 2 NR2E1 0.187 nuclear receptor subfamily 2, group E, member 1 [Homo... RARB 0.174 retinoic acid receptor, beta isoform 1 ESRRA 0.169 estrogen-related receptor alpha RARA 0.168 retinoic acid receptor, alpha isoform 1 RARA 0.168 retinoic acid receptor, alpha isoform 2 RARA 0.168 retinoic acid receptor, alpha isoform 1 RARG 0.166 retinoic acid receptor, gamma isoform 1 RARG 0.165 retinoic acid receptor, gamma isoform 2 NR2E3 0.160 photoreceptor-specific nuclear receptor isoform a [Ho... THRB 0.147 thyroid hormone receptor, beta THRB 0.147 thyroid hormone receptor, beta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.