Guide to the Human Genome
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Name: HNF4G Sequence: fasta or formatted (445aa) NCBI GI: 115583654
Description:

hepatocyte nuclear factor 4, gamma

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         25           2
 C cysteine            3.1         14           1
 D aspartate           6.3         28           2
 E glutamate           4.9         22           1
 F phenylalanine       3.1         14           2
 G glycine             5.6         25           2
 H histidine           2.9         13           2
 I isoleucine          6.3         28           1
 K lysine              5.2         23           2
 L leucine             9.9         44           5
 M methionine          3.1         14           2
 N asparagine          4.5         20           2
 P proline             4.3         19           2
 Q glutamine           6.5         29           2
 R arginine            6.1         27           2
 S serine              9.0         40           2
 T threonine           4.5         20           2
 V valine              5.6         25           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hepatocyte nuclear factor 4, gamma 
HNF4A                 0.717   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.707   hepatocyte nuclear factor 4 alpha isoform b 
HNF4A                 0.677   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.667   hepatocyte nuclear factor 4 alpha isoform d 
HNF4A                 0.643   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.603   hepatocyte nuclear factor 4 alpha isoform f 
RXRB                  0.278   retinoid X receptor, beta 
RXRA                  0.274   retinoid X receptor, alpha 
RXRG                  0.266   retinoid X receptor, gamma isoform a 
NR2F6                 0.222   nuclear receptor subfamily 2, group F, member 6 [Hom...
NR2F2                 0.221   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F1                 0.219   nuclear receptor subfamily 2, group F, member 1 [Homo...
NR2E3                 0.184   photoreceptor-specific nuclear receptor isoform b [Ho...
NR2E1                 0.182   nuclear receptor subfamily 2, group E, member 1 [Homo...
ESRRB                 0.173   estrogen-related receptor beta 
ESRRG                 0.170   estrogen-related receptor gamma isoform 2 
ESRRG                 0.170   estrogen-related receptor gamma isoform 2 
ESRRG                 0.170   estrogen-related receptor gamma isoform 1 
ESRRG                 0.170   estrogen-related receptor gamma isoform 2 
RARB                  0.157   retinoic acid receptor, beta isoform 1 
NR2E3                 0.151   photoreceptor-specific nuclear receptor isoform a [Ho...
RARG                  0.148   retinoic acid receptor, gamma isoform 2 
RARA                  0.147   retinoic acid receptor, alpha isoform 1 
RARA                  0.147   retinoic acid receptor, alpha isoform 1 
RARG                  0.147   retinoic acid receptor, gamma isoform 1 
RARA                  0.145   retinoic acid receptor, alpha isoform 2 
NR4A2                 0.141   nuclear receptor subfamily 4, group A, member 2 [Homo...
NR4A1                 0.127   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR4A1                 0.127   nuclear receptor subfamily 4, group A, member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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