Guide to the Human Genome
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Name: NR2F6 Sequence: fasta or formatted (404aa) NCBI GI: 20070199
Description:

nuclear receptor subfamily 2, group F, member 6

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.1         57           3
 C cysteine            3.0         12           1
 D aspartate           4.7         19           2
 E glutamate           4.7         19           2
 F phenylalanine       4.2         17           2
 G glycine             9.9         40           3
 H histidine           2.0          8           2
 I isoleucine          2.2          9           1
 K lysine              3.0         12           2
 L leucine            10.4         42           3
 M methionine          1.7          7           1
 N asparagine          1.7          7           1
 P proline             6.9         28           2
 Q glutamine           5.2         21           1
 R arginine            6.9         28           2
 S serine              6.9         28           2
 T threonine           2.7         11           1
 V valine              6.4         26           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor subfamily 2, group F, member 6 [Hom... 
NR2F1                 0.601   nuclear receptor subfamily 2, group F, member 1 [Homo...
NR2F2                 0.598   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F2                 0.413   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.404   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.404   nuclear receptor subfamily 2, group F, member 2 iso...
NR2E3                 0.317   photoreceptor-specific nuclear receptor isoform b [Ho...
RXRA                  0.314   retinoid X receptor, alpha 
RXRG                  0.312   retinoid X receptor, gamma isoform a 
RXRB                  0.308   retinoid X receptor, beta 
NR2E1                 0.279   nuclear receptor subfamily 2, group E, member 1 [Homo...
NR2E3                 0.266   photoreceptor-specific nuclear receptor isoform a [Ho...
HNF4A                 0.258   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.258   hepatocyte nuclear factor 4 alpha isoform b 
HNF4A                 0.258   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.258   hepatocyte nuclear factor 4 alpha isoform d 
HNF4A                 0.254   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.254   hepatocyte nuclear factor 4 alpha isoform f 
HNF4G                 0.245   hepatocyte nuclear factor 4, gamma 
ESRRB                 0.208   estrogen-related receptor beta 
ESRRA                 0.207   estrogen-related receptor alpha 
RARG                  0.203   retinoic acid receptor, gamma isoform 2 
RARG                  0.199   retinoic acid receptor, gamma isoform 1 
ESRRG                 0.196   estrogen-related receptor gamma isoform 2 
ESRRG                 0.196   estrogen-related receptor gamma isoform 2 
ESRRG                 0.196   estrogen-related receptor gamma isoform 1 
ESRRG                 0.196   estrogen-related receptor gamma isoform 2 
RARA                  0.191   retinoic acid receptor, alpha isoform 1 
RARA                  0.191   retinoic acid receptor, alpha isoform 1 
RARA                  0.191   retinoic acid receptor, alpha isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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