Guide to the Human Genome
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Name: NR2F1 Sequence: fasta or formatted (423aa) NCBI GI: 5032173
Description:

nuclear receptor subfamily 2, group F, member 1

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         36           3
 C cysteine            4.0         17           1
 D aspartate           3.5         15           2
 E glutamate           4.3         18           2
 F phenylalanine       3.3         14           2
 G glycine             8.7         37           5
 H histidine           2.6         11           2
 I isoleucine          3.8         16           1
 K lysine              3.3         14           2
 L leucine             9.2         39           3
 M methionine          2.6         11           1
 N asparagine          3.8         16           2
 P proline             7.3         31           2
 Q glutamine           7.6         32           4
 R arginine            6.1         26           2
 S serine              8.5         36           3
 T threonine           3.8         16           1
 V valine              5.2         22           2
 W tryptophan          0.9          4           1
 Y tyrosine            2.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor subfamily 2, group F, member 1 [Homo... 
NR2F2                 0.830   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F2                 0.576   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.563   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.563   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F6                 0.561   nuclear receptor subfamily 2, group F, member 6 [Hom...
RXRG                  0.299   retinoid X receptor, gamma isoform a 
RXRA                  0.298   retinoid X receptor, alpha 
NR2E3                 0.292   photoreceptor-specific nuclear receptor isoform b [Ho...
RXRB                  0.291   retinoid X receptor, beta 
NR2E1                 0.278   nuclear receptor subfamily 2, group E, member 1 [Homo...
NR2E3                 0.241   photoreceptor-specific nuclear receptor isoform a [Ho...
HNF4A                 0.229   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.229   hepatocyte nuclear factor 4 alpha isoform b 
HNF4A                 0.229   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.229   hepatocyte nuclear factor 4 alpha isoform d 
HNF4A                 0.225   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.225   hepatocyte nuclear factor 4 alpha isoform f 
HNF4G                 0.225   hepatocyte nuclear factor 4, gamma 
ESRRB                 0.196   estrogen-related receptor beta 
ESRRG                 0.193   estrogen-related receptor gamma isoform 2 
ESRRG                 0.193   estrogen-related receptor gamma isoform 2 
ESRRG                 0.193   estrogen-related receptor gamma isoform 1 
ESRRG                 0.193   estrogen-related receptor gamma isoform 2 
ESRRA                 0.185   estrogen-related receptor alpha 
NR4A1                 0.179   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR4A1                 0.179   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR4A2                 0.177   nuclear receptor subfamily 4, group A, member 2 [Homo...
RARG                  0.166   retinoic acid receptor, gamma isoform 2 
RARG                  0.165   retinoic acid receptor, gamma isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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