RXRA 29395

Name: RXRA	Sequence: fasta or formatted (462aa)		NCBI GI: 4506755
Description: retinoid X receptor, alpha		Referenced in: Nuclear Receptors Peroxisomes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 29 2 C cysteine 2.8 13 1 D aspartate 4.5 21 2 E glutamate 6.1 28 2 F phenylalanine 3.7 17 3 G glycine 6.9 32 1 H histidine 3.2 15 1 I isoleucine 4.3 20 1 K lysine 5.6 26 1 L leucine 10.4 48 3 M methionine 3.7 17 1 N asparagine 3.9 18 1 P proline 7.6 35 2 Q glutamine 3.0 14 1 R arginine 5.4 25 1 S serine 9.7 45 3 T threonine 5.2 24 2 V valine 5.2 24 1 W tryptophan 0.4 2 1 Y tyrosine 1.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoid X receptor, alpha RXRG 0.671 retinoid X receptor, gamma isoform a RXRB 0.658 retinoid X receptor, beta NR2F2 0.282 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.277 nuclear receptor subfamily 2, group F, member 1 [Homo... NR2F6 0.272 nuclear receptor subfamily 2, group F, member 6 [Hom... HNF4A 0.266 hepatocyte nuclear factor 4 alpha isoform e HNF4A 0.266 hepatocyte nuclear factor 4 alpha isoform d HNF4A 0.264 hepatocyte nuclear factor 4 alpha isoform f HNF4A 0.262 hepatocyte nuclear factor 4 alpha isoform a HNF4A 0.262 hepatocyte nuclear factor 4 alpha isoform b HNF4G 0.261 hepatocyte nuclear factor 4, gamma HNF4A 0.260 hepatocyte nuclear factor 4 alpha isoform c NR2E3 0.212 photoreceptor-specific nuclear receptor isoform b [Ho... ESRRG 0.212 estrogen-related receptor gamma isoform 2 ESRRG 0.212 estrogen-related receptor gamma isoform 2 ESRRG 0.212 estrogen-related receptor gamma isoform 1 ESRRG 0.212 estrogen-related receptor gamma isoform 2 NR2E1 0.208 nuclear receptor subfamily 2, group E, member 1 [Homo... ESRRB 0.207 estrogen-related receptor beta RARG 0.207 retinoic acid receptor, gamma isoform 1 RARG 0.200 retinoic acid receptor, gamma isoform 2 RARB 0.197 retinoic acid receptor, beta isoform 1 RARA 0.196 retinoic acid receptor, alpha isoform 1 RARA 0.196 retinoic acid receptor, alpha isoform 1 ESRRA 0.192 estrogen-related receptor alpha RARA 0.188 retinoic acid receptor, alpha isoform 2 NR4A2 0.178 nuclear receptor subfamily 4, group A, member 2 [Homo... NR4A1 0.177 nuclear receptor subfamily 4, group A, member 1 [Hom... NR4A1 0.177 nuclear receptor subfamily 4, group A, member 1 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.