Guide to the Human Genome
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Name: G2E3 Sequence: fasta or formatted (706aa) NCBI GI: 33620749
Description:

G2/M-phase specific E3 ubiquitin ligase

Referenced in:

PHD Finger Proteins
Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         32           1
 C cysteine            5.4         38           2
 D aspartate           3.8         27           2
 E glutamate           7.4         52           3
 F phenylalanine       5.0         35           3
 G glycine             5.5         39           2
 H histidine           2.7         19           1
 I isoleucine          6.9         49           3
 K lysine              7.1         50           3
 L leucine             9.5         67           2
 M methionine          1.3          9           1
 N asparagine          6.5         46           2
 P proline             4.4         31           2
 Q glutamine           3.8         27           1
 R arginine            4.7         33           2
 S serine              8.2         58           2
 T threonine           4.2         30           3
 V valine              4.1         29           1
 W tryptophan          1.4         10           1
 Y tyrosine            3.5         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G2/M-phase specific E3 ubiquitin ligase 
PHF7                  0.163   PHD finger protein 7 isoform 1 
PHF7                  0.125   PHD finger protein 7 isoform 2 
PHF6                  0.040   PHD finger protein 6 isoform 1 
PHF6                  0.040   PHD finger protein 6 isoform 1 
PHF6                  0.040   PHD finger protein 6 isoform 2 
PHF11                 0.028   PHD finger protein 11 isoform b 
PHF11                 0.028   PHD finger protein 11 isoform a 
MLL                   0.023   myeloid/lymphoid or mixed-lineage leukemia protein [...
MLL4                  0.021   myeloid/lymphoid or mixed-lineage leukemia 4 
MLL3                  0.021   myeloid/lymphoid or mixed-lineage leukemia 3 
MLL2                  0.020   myeloid/lymphoid or mixed-lineage leukemia 2 
TCF20                 0.019   transcription factor 20 isoform 1 
TCF20                 0.017   transcription factor 20 isoform 2 
RAI1                  0.017   retinoic acid induced 1 
NEDD4                 0.011   neural precursor cell expressed, developmentally do...
NEDD4                 0.011   neural precursor cell expressed, developmentally do...
KIAA0317              0.010   hypothetical protein LOC9870 
HECW1                 0.007   NEDD4-like ubiquitin-protein ligase 1 
PHF17                 0.007   PHD finger protein 17 short isoform 
PHF17                 0.007   PHD finger protein 17 long isoform 
ZNF530                0.007   zinc finger protein 530 
KCP                   0.006   cysteine rich BMP regulator 2 isoform 1 
ZNF662                0.006   zinc finger protein 662 isoform 2 
ZNF662                0.006   zinc finger protein 662 isoform 1 
HECTD1                0.006   HECT domain containing 1 
PHF15                 0.006   PHD finger protein 15 
BRD1                  0.006   bromodomain containing protein 1 
UBE3C                 0.006   ubiquitin protein ligase E3C 
MEGF9                 0.006   multiple EGF-like-domains 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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