Guide to the Human Genome
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Name: ZNF530 Sequence: fasta or formatted (599aa) NCBI GI: 167830431
Description:

zinc finger protein 530

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         21           3
 C cysteine            5.7         34           1
 D aspartate           2.7         16           1
 E glutamate           8.2         49           2
 F phenylalanine       4.8         29           1
 G glycine             6.7         40           2
 H histidine           6.8         41           2
 I isoleucine          2.5         15           1
 K lysine              5.7         34           1
 L leucine             6.0         36           2
 M methionine          1.3          8           2
 N asparagine          1.5          9           1
 P proline             3.8         23           1
 Q glutamine           5.3         32           2
 R arginine            9.0         54           2
 S serine             11.0         66           2
 T threonine           6.2         37           1
 V valine              5.3         32           1
 W tryptophan          0.7          4           1
 Y tyrosine            3.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 530 
ZNF256                0.524   zinc finger protein 256 
ZNF551                0.518   zinc finger protein 551 
ZNF132                0.518   zinc finger protein 132 
ZNF304                0.512   zinc finger protein 304 
ZNF418                0.512   zinc finger protein 418 
ZNF416                0.485   zinc finger protein 416 
ZNF814                0.478   zinc finger protein 814 
ZNF211                0.472   zinc finger protein 211 isoform 2 
ZNF211                0.471   zinc finger protein 211 isoform 1 
ZNF549                0.470   zinc finger protein 549 
ZNF417                0.466   zinc finger protein 417 
ZNF587                0.465   zinc finger protein 587 
ZNF17                 0.462   zinc finger protein 17 
LOC100293516          0.454   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.452   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.452   PREDICTED: hypothetical protein XP_002343703 
ZNF420                0.437   zinc finger protein 420 
ZNF135                0.427   zinc finger protein 135 
LOC100287429          0.422   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.422   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.422   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.422   zinc finger protein 84 
ZNF84                 0.422   zinc finger protein 84 
ZNF749                0.422   zinc finger protein 749 
ZNF184                0.412   zinc finger protein 184 
ZNF189                0.410   zinc finger protein 189 isoform 1 
ZNF665                0.410   zinc finger protein 665 
ZNF776                0.406   zinc finger protein 776 
ZNF605                0.405   zinc finger protein 605 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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