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Search of human proteins with 33149331
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33149331 nucleoredoxin [Homo sapiens]
(435 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33149331 nucleoredoxin [Homo sapiens] 877 0.0
gi|239735508 nucleoredoxin-like 2 isoform 1 [Homo sapiens] 71 2e-12
gi|19923987 nucleoredoxin-like 1 [Homo sapiens] 68 1e-11
gi|239735607 nucleoredoxin-like 2 isoform 2 [Homo sapiens] 50 4e-06
gi|110349719 titin isoform N2-A [Homo sapiens] 33 0.51
gi|110349717 titin isoform novex-2 [Homo sapiens] 33 0.51
gi|110349713 titin isoform novex-1 [Homo sapiens] 33 0.51
gi|110349715 titin isoform N2-B [Homo sapiens] 33 0.51
gi|170784817 transcription factor CP2-like 3 [Homo sapiens] 33 0.51
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap... 33 0.51
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap... 33 0.51
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi... 33 0.51
gi|4505531 oxysterol binding protein [Homo sapiens] 32 1.1
gi|122937233 discs, large (Drosophila) homolog-associated protei... 32 1.5
gi|73476377 LBXCOR1 homolog [Homo sapiens] 32 1.5
gi|20070125 prolyl 4-hydroxylase, beta subunit precursor [Homo s... 31 1.9
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 31 1.9
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 31 2.5
gi|56550061 leukocyte membrane antigen [Homo sapiens] 30 3.3
gi|28372543 protein disulfide isomerase-like, testis expressed [... 30 4.3
gi|134142824 forkhead box D2 [Homo sapiens] 30 4.3
gi|157743247 F-box protein 45 [Homo sapiens] 30 4.3
gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens] 30 5.6
gi|83267879 eukaryotic translation initiation factor 2B, subunit... 30 5.6
gi|37537722 agmatine ureohydrolase (agmatinase) [Homo sapiens] 30 5.6
gi|164607156 axonemal dynein light chain 1 [Homo sapiens] 30 5.6
gi|54633319 PDZ domain-containing guanine nucleotide exchange fa... 29 7.3
gi|29893555 angiopoietin-like 6 [Homo sapiens] 29 7.3
gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens] 29 7.3
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 29 7.3
>gi|33149331 nucleoredoxin [Homo sapiens]
Length = 435
Score = 877 bits (2266), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MSGFLEELLGEKLVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRL 60
MSGFLEELLGEKLVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRL
Sbjct: 1 MSGFLEELLGEKLVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRL 60
Query: 61 RGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRK 120
RGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRK
Sbjct: 61 RGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRK 120
Query: 121 LKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPWGPKPFREVIAGPLLR 180
LKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPWGPKPFREVIAGPLLR
Sbjct: 121 LKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPWGPKPFREVIAGPLLR 180
Query: 181 NNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSADRSE 240
NNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSADRSE
Sbjct: 181 NNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSADRSE 240
Query: 241 ESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDE 300
ESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDE
Sbjct: 241 ESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDE 300
Query: 301 DCREFPWHPKPVLELSDSNAAQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYK 360
DCREFPWHPKPVLELSDSNAAQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYK
Sbjct: 301 DCREFPWHPKPVLELSDSNAAQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYK 360
Query: 361 AKEEEAPLLFFVAGEDDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEITPAIVEA 420
AKEEEAPLLFFVAGEDDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEITPAIVEA
Sbjct: 361 AKEEEAPLLFFVAGEDDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEITPAIVEA 420
Query: 421 FVNDFLAEKLKPEPI 435
FVNDFLAEKLKPEPI
Sbjct: 421 FVNDFLAEKLKPEPI 435
>gi|239735508 nucleoredoxin-like 2 isoform 1 [Homo sapiens]
Length = 156
Score = 70.9 bits (172), Expect = 2e-12
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 178 LLRNNGQSLES-SSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQN---FEIIF 233
L+ G ++E+ ++L+ V +YF+A C P R T +L + Y + + FE++F
Sbjct: 10 LVTCKGATVEAEAALQNKVVALYFAAARCAPSRDFTPLLCDFYTALVAEARRPAPFEVVF 69
Query: 234 VSADRSEESFKQYFSEM--PWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQ 291
VSAD S + + E+ WLA+P+ D R L + Y + IP L+++ GEVIT +
Sbjct: 70 VSADGSSQEMLDFMRELHGAWLALPFHDPYRHE-LRKRYNVTAIPKLVIVKQNGEVITNK 128
Query: 292 GRVEV 296
GR ++
Sbjct: 129 GRKQI 133
Score = 57.4 bits (137), Expect = 3e-08
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 23/153 (15%)
Query: 7 ELLGEK-LVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAA 65
++LGE+ LVT G V+ + A ++ LYF + AP + L FY L +A
Sbjct: 3 DILGERHLVTCKGATVEAEA--ALQNKVVALYFAAARCAPSRDFTPLLCDFYTALVAEAR 60
Query: 66 AGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDM--PWLALPYKEKHRKLKL 123
P P E+VFVS+D ++ DF+R++ WLALP+ + +R +L
Sbjct: 61 R-PAP---------------FEVVFVSADGSSQEMLDFMRELHGAWLALPFHDPYRH-EL 103
Query: 124 WNKYRISNIPSLIFLDATTGKVVCRNGLLVIRD 156
+Y ++ IP L+ + G+V+ G IR+
Sbjct: 104 RKRYNVTAIPKLVIV-KQNGEVITNKGRKQIRE 135
>gi|19923987 nucleoredoxin-like 1 [Homo sapiens]
Length = 212
Score = 68.2 bits (165), Expect = 1e-11
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 178 LLRNNGQSLE-------SSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEA----- 225
L+RNN E S LE V ++F A CP C++ +L + + ++ +
Sbjct: 10 LIRNNSDQDELDTEAEVSRRLENRLVLLFFGAGACPQCQAFVPILKDFFVRLTDEFYVLR 69
Query: 226 GQNFEIIFVSADRSEESFKQYFSEMP--WLAVPYTDEARRSRLNRLYGIQGIPTLIMLDP 283
+++VS D +EE + +MP WL +P+ D+ RR L R + ++ +P +++L P
Sbjct: 70 AAQLALVYVSQDSTEEQQDLFLKDMPKKWLFLPFEDDLRRD-LGRQFSVERLPAVVVLKP 128
Query: 284 QGEVITRQGRVEV 296
G+V+TR G E+
Sbjct: 129 DGDVLTRDGADEI 141
Score = 40.4 bits (93), Expect = 0.003
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 19 EEVDVHSLGARGIS--LLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGAGAGA 76
+E+D + +R + L+ L+FG C L F+ RL + A
Sbjct: 18 DELDTEAEVSRRLENRLVLLFFGAGACPQCQAFVPILKDFFVRLTDEFYV-------LRA 70
Query: 77 AAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMP--WLALPYKEKHRKLKLWNKYRISNIPS 134
A +L +V+VS D + Q F++DMP WL LP+++ R+ L ++ + +P+
Sbjct: 71 A-------QLALVYVSQDSTEEQQDLFLKDMPKKWLFLPFEDDLRR-DLGRQFSVERLPA 122
Query: 135 LIFLDATTGKVVCRNG 150
++ L G V+ R+G
Sbjct: 123 VVVL-KPDGDVLTRDG 137
>gi|239735607 nucleoredoxin-like 2 isoform 2 [Homo sapiens]
Length = 135
Score = 50.1 bits (118), Expect = 4e-06
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 178 LLRNNGQSLES-SSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQN---FEIIF 233
L+ G ++E+ ++L+ V +YF+A C P R T +L + Y + + FE++F
Sbjct: 10 LVTCKGATVEAEAALQNKVVALYFAAARCAPSRDFTPLLCDFYTALVAEARRPAPFEVVF 69
Query: 234 VSADRSEESFKQYFSEM--PWLAVPYTDEARRSRL 266
VSAD S + + E+ WLA+P+ D R+ L
Sbjct: 70 VSADGSSQEMLDFMRELHGAWLALPFHDPYRQRSL 104
Score = 47.4 bits (111), Expect = 3e-05
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 7 ELLGEK-LVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAA 65
++LGE+ LVT G V+ + A ++ LYF + AP + L FY L +A
Sbjct: 3 DILGERHLVTCKGATVEAEA--ALQNKVVALYFAAARCAPSRDFTPLLCDFYTALVAEAR 60
Query: 66 AGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDM--PWLALPYKEKHRKLKL 123
P P E+VFVS+D ++ DF+R++ WLALP+ + +R+ L
Sbjct: 61 R-PAP---------------FEVVFVSADGSSQEMLDFMRELHGAWLALPFHDPYRQRSL 104
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 33.1 bits (74), Expect = 0.51
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 68 PGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRD----MPWLALPYKEKHRKLKL 123
P P + +EP+P R+LE+ ++ + W +RD + Y+E+ +
Sbjct: 18787 PKPVLASDPLSEPDPPRKLEVTEMTKNSATLAWLPPLRDGGAKIDGYITSYREEEQPADR 18846
Query: 124 WNKYRISNIPSLIFLDATTGK 144
W +Y + SL+ GK
Sbjct: 18847 WTEYSVVKDLSLVVTGLKEGK 18867
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 33.1 bits (74), Expect = 0.51
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 68 PGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRD----MPWLALPYKEKHRKLKL 123
P P + +EP+P R+LE+ ++ + W +RD + Y+E+ +
Sbjct: 12482 PKPVLASDPLSEPDPPRKLEVTEMTKNSATLAWLPPLRDGGAKIDGYITSYREEEQPADR 12541
Query: 124 WNKYRISNIPSLIFLDATTGK 144
W +Y + SL+ GK
Sbjct: 12542 WTEYSVVKDLSLVVTGLKEGK 12562
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 33.1 bits (74), Expect = 0.51
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 68 PGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRD----MPWLALPYKEKHRKLKL 123
P P + +EP+P R+LE+ ++ + W +RD + Y+E+ +
Sbjct: 12415 PKPVLASDPLSEPDPPRKLEVTEMTKNSATLAWLPPLRDGGAKIDGYITSYREEEQPADR 12474
Query: 124 WNKYRISNIPSLIFLDATTGK 144
W +Y + SL+ GK
Sbjct: 12475 WTEYSVVKDLSLVVTGLKEGK 12495
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 33.1 bits (74), Expect = 0.51
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 68 PGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRD----MPWLALPYKEKHRKLKL 123
P P + +EP+P R+LE+ ++ + W +RD + Y+E+ +
Sbjct: 12290 PKPVLASDPLSEPDPPRKLEVTEMTKNSATLAWLPPLRDGGAKIDGYITSYREEEQPADR 12349
Query: 124 WNKYRISNIPSLIFLDATTGK 144
W +Y + SL+ GK
Sbjct: 12350 WTEYSVVKDLSLVVTGLKEGK 12370
>gi|170784817 transcription factor CP2-like 3 [Homo sapiens]
Length = 625
Score = 33.1 bits (74), Expect = 0.51
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 308 HPKPVLELSDSNAAQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEK---IIAKYKAKEE 364
H +PVL + D + A L + D E +G S K++ +P+ E+ + +K +E
Sbjct: 475 HSQPVLFIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEG 534
Query: 365 EAPLLFFVAGE-DDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEI 413
+L +V E DD+ D+L +P + L + KY + VE+I
Sbjct: 535 TKRVLLYVRKETDDVFDALM------LKSPTVKGLMEAISEKYGLPVEKI 578
>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 33.1 bits (74), Expect = 0.51
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 153 VIRDDPEGLEFPWGPKPFREVIAGPLLRNNGQSLESSSLEGSH--VGVYFSAHWCPPCRS 210
+++ + E +EFP G K +VI + E+S E V V FSA WC PCR+
Sbjct: 367 ILKPEEETMEFPEGDKV--KVILSK------EDFEASLKEAGERLVAVDFSATWCGPCRT 418
Query: 211 LTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQ 245
+ + + ++ + V AD EE ++
Sbjct: 419 IR----PFFHALSVKHEDVVFLEVDADNCEEVVRE 449
>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
sapiens]
Length = 553
Score = 33.1 bits (74), Expect = 0.51
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 153 VIRDDPEGLEFPWGPKPFREVIAGPLLRNNGQSLESSSLEGSH--VGVYFSAHWCPPCRS 210
+++ + E +EFP G K +VI + E+S E V V FSA WC PCR+
Sbjct: 434 ILKPEEETMEFPEGDKV--KVILSK------EDFEASLKEAGERLVAVDFSATWCGPCRT 485
Query: 211 LTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQ 245
+ + + ++ + V AD EE ++
Sbjct: 486 IR----PFFHALSVKHEDVVFLEVDADNCEEVVRE 516
>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 33.1 bits (74), Expect = 0.51
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 153 VIRDDPEGLEFPWGPKPFREVIAGPLLRNNGQSLESSSLEGSH--VGVYFSAHWCPPCRS 210
+++ + E +EFP G K +VI + E+S E V V FSA WC PCR+
Sbjct: 367 ILKPEEETMEFPEGDKV--KVILSK------EDFEASLKEAGERLVAVDFSATWCGPCRT 418
Query: 211 LTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQ 245
+ + + ++ + V AD EE ++
Sbjct: 419 IR----PFFHALSVKHEDVVFLEVDADNCEEVVRE 449
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 32.0 bits (71), Expect = 1.1
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 58 GRLRGDAAAGPGPGAGAGAAAEPEP 82
G + AA GPGPGAG AAA P P
Sbjct: 48 GTVVAAAAGGPGPGAGGVAAAGPAP 72
>gi|122937233 discs, large (Drosophila) homolog-associated protein 3
[Homo sapiens]
Length = 979
Score = 31.6 bits (70), Expect = 1.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 61 RGDAAAGPGPGAGAGAAAEP 80
RG A AGPGP G G A EP
Sbjct: 143 RGPAGAGPGPAPGTGTAPEP 162
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 31.6 bits (70), Expect = 1.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 45 PCAQLSASLAAFYGRLR----GDAAAGPGPGAGAGAAAEPE 81
P + + S+A YG R A GPGPGAG+G P+
Sbjct: 553 PVVKDTESIAKLYGSAREAYGAGPARGPGPGAGSGGYVSPD 593
>gi|20070125 prolyl 4-hydroxylase, beta subunit precursor [Homo
sapiens]
Length = 508
Score = 31.2 bits (69), Expect = 1.9
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 37/113 (32%)
Query: 320 AAQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYKAKEEEAPLLFFVAGEDDMT 379
AA+ +G L +F+DS+ ++I+ + K+EE P + + E++MT
Sbjct: 278 AAESFKGKILFIFIDSDHTDN------------QRILEFFGLKKEECPAVRLITLEEEMT 325
Query: 380 DSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEITPAIVEAFVNDFLAEKLKP 432
KY + EE+T + F + FL K+KP
Sbjct: 326 -------------------------KYKPESEELTAERITEFCHRFLEGKIKP 353
Score = 30.0 bits (66), Expect = 4.3
Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 35/158 (22%)
Query: 198 VYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQYFSEMPWLAVPY 257
V F A WC C++L ++ K+K G EI D +EE
Sbjct: 46 VEFYAPWCGHCKALAPEYAKAAGKLKAEGS--EIRLAKVDATEE---------------- 87
Query: 258 TDEARRSRLNRLYGIQGIPTLIML------DPQGEVITRQGRVEVLNDEDCREFPWHPKP 311
S L + YG++G PT+ P+ R+ +++N R P
Sbjct: 88 ------SDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREAD-DIVNWLKKRTGP----A 136
Query: 312 VLELSDSNAAQLNEGPCLVLFVDSEDDGESEAAKQLIQ 349
L D AA+ V + D ES++AKQ +Q
Sbjct: 137 ATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQ 174
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 31.2 bits (69), Expect = 1.9
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 16 GGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRG-----DAAAGPGP 70
GGG + G+R +S L L +A C L AA GR+ + GP
Sbjct: 21 GGGGGRSATTAGSRAVSALCLLLSVGSAAACLLLGVQAAALQGRVAALEEERELLRRAGP 80
Query: 71 GAGAGAAAEPEPRRRL 86
A AEP R L
Sbjct: 81 PGALDAWAEPHLERLL 96
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 30.8 bits (68), Expect = 2.5
Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 3/146 (2%)
Query: 209 RSLTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQYFSEMPWLAVPY---TDEARRSR 265
R L + L E K+ E + E+ A ++ QY + Y T E
Sbjct: 578 RELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLH 637
Query: 266 LNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAAQLNE 325
L Q + L + QG+ + R E+ ++ E L S A E
Sbjct: 638 NQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGE 697
Query: 326 GPCLVLFVDSEDDGESEAAKQLIQPI 351
G L + +++ E E A + QP+
Sbjct: 698 GDGLDREEEEDEEEEEEEAVAVPQPM 723
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 30.4 bits (67), Expect = 3.3
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 113 PYKEKHRKLKLWNKYRISNIPSLIFLD----ATTGKVVCRNGLLVIRDDPEGLEF 163
PY+++HR L NKY P IFL T G RNG + IRD P L F
Sbjct: 37 PYEKEHRTL---NKYWCR--PPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSF 86
>gi|28372543 protein disulfide isomerase-like, testis expressed
[Homo sapiens]
Length = 584
Score = 30.0 bits (66), Expect = 4.3
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 355 IIAKYK--AKEEEAPLLFFVAGEDDMTDS-LRDYTNLPEA-APLLTILDMSARAKYVMDV 410
II YK +KE + +LF + D+ + + Y + E P + IL++S+ A+Y M
Sbjct: 292 IIQHYKLASKEFQNKILFILVDADEPRNGRVFKYFRVTEVDIPSVQILNLSSDARYKMPS 351
Query: 411 EEITPAIVEAFVNDFLAE 428
++IT ++ F FL++
Sbjct: 352 DDITYESLKKFGRSFLSK 369
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 30.0 bits (66), Expect = 4.3
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 39 GCSLSAPCAQLSASLAAFYGRLRGDAAA-----GPGPGAGAGAAAEPEP 82
GCS P A S AA G AAA GPGPG +G AA P
Sbjct: 76 GCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSP 124
Score = 28.9 bits (63), Expect = 9.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 37 YFGCSLSAPCAQLSASL--AAFYGRLRGDAAAGPGPGAGAGAAAEP 80
++ SLS P A +A L A L+ DA G G G GAGA P
Sbjct: 366 FYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAG-GGGAGAGQRP 410
>gi|157743247 F-box protein 45 [Homo sapiens]
Length = 286
Score = 30.0 bits (66), Expect = 4.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 62 GDAAAGPGPGAGAGAAAEPEPRRRLEIVF 90
G A AG G G+GA A P R LE+VF
Sbjct: 20 GGAGAGAGSGSGAAGAGGRLPSRVLELVF 48
>gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens]
Length = 701
Score = 29.6 bits (65), Expect = 5.6
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 76 AAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYR 128
++A P+P + + SS++ Q+ W F R +P+ + E+ + L LW Y+
Sbjct: 490 SSALPDPGFQKITLSSSSEEYQKVWNLFNRTLPFYFVQKIERVQNLALWEVYQ 542
>gi|83267879 eukaryotic translation initiation factor 2B, subunit 5
epsilon, 82kDa [Homo sapiens]
Length = 721
Score = 29.6 bits (65), Expect = 5.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 64 AAAGPG-PGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALP 113
+ AGPG G G AE EP L+ V V +D R++ +D P + LP
Sbjct: 20 SGAGPGGSGGGGARGAEEEPPPPLQAVLV-ADSFDRRFFPISKDQPRVLLP 69
>gi|37537722 agmatine ureohydrolase (agmatinase) [Homo sapiens]
Length = 352
Score = 29.6 bits (65), Expect = 5.6
Identities = 49/190 (25%), Positives = 66/190 (34%), Gaps = 65/190 (34%)
Query: 60 LRGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHR 119
L A GPGPG GA AA +F + RQ D R+ P
Sbjct: 5 LASGCARGPGPGVGARPAAG---------LFHPGRRQSRQASDAPRNQP----------- 44
Query: 120 KLKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFP--------------- 164
PS F+ G VC L ++ PEGL+
Sbjct: 45 -------------PSPEFVARPVG--VCSMMRLPVQTSPEGLDAAFIGVPLDTGTSNRPG 89
Query: 165 --WGPKPFRE--VIAGPLLRNNG----QSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLV 216
+GP+ RE V+ G + + G QSL + L +V +Y C R +
Sbjct: 90 ARFGPRRIREESVMLGTVNPSTGALPFQSLMVADLGDVNVNLYNLQDSC-------RRIQ 142
Query: 217 ESYRKIKEAG 226
E+Y KI AG
Sbjct: 143 EAYEKIVAAG 152
>gi|164607156 axonemal dynein light chain 1 [Homo sapiens]
Length = 190
Score = 29.6 bits (65), Expect = 5.6
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 84 RRLEIVFVSSDQDQRQWQDFVR--------DMPWLALPYKEKHRKLKLWNKYRISNIPSL 135
++L+I+++S++ + W +FV+ D+ ++ P +EKH W + +P L
Sbjct: 115 KKLKILYMSNNL-VKDWAEFVKLAELPCLEDLVFVGNPLEEKHSAENNWIEEATKRVPKL 173
Query: 136 IFLDAT 141
LD T
Sbjct: 174 KKLDGT 179
>gi|54633319 PDZ domain-containing guanine nucleotide exchange
factor I [Homo sapiens]
Length = 1601
Score = 29.3 bits (64), Expect = 7.3
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 314 ELSDSNAAQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYKAKEEEAPLLFFVA 373
E+ D + +L EGP VDSEDD E + P+ + + + ++E A
Sbjct: 214 EVGDVDLTRLPEGP-----VDSEDDEEEDEEIDRTDPLQGRDLVRECLEKEPAD-----K 263
Query: 374 GEDDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEITPAIV 418
+DD+ L LP A + + + + +V E AI+
Sbjct: 264 TDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAII 308
>gi|29893555 angiopoietin-like 6 [Homo sapiens]
Length = 470
Score = 29.3 bits (64), Expect = 7.3
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 50 SASLAAFYGRLRGDAAAGPGPGAGAGAAAEPEPRRRLEIV 89
S L+A G+LR GPGAG GA EP L ++
Sbjct: 100 SRGLSARLGQLRAQLQHEAGPGAGPGADLGAEPAAALALL 139
>gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]
Length = 1185
Score = 29.3 bits (64), Expect = 7.3
Identities = 20/52 (38%), Positives = 21/52 (40%)
Query: 27 GARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGAGAGAAA 78
G G G G S + Q AA G G AAG PG GAGA A
Sbjct: 119 GGPGAGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASPGLGAGAGA 170
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 29.3 bits (64), Expect = 7.3
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 334 DSEDDGESEAAKQLIQPIAEKIIAKYKAKEEEAPLLFFVAGEDDMTDSLRDYTNLPEAAP 393
+S DD AAK+++ P EK ++ YK + + + + EA
Sbjct: 795 ESSDDQGQPAAKRMLSPTREKELSLYKKTKRAISSKKYSVAKAEAE---------AEATT 845
Query: 394 LLTILDMSARAKYVMDVEEITPAIVEAFVNDF 425
+ ++ ++VMD E+ P++ + F
Sbjct: 846 PIELISRGPDGRFVMDPAEMEPSLKSRRIEGF 877
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,709,431
Number of Sequences: 37866
Number of extensions: 843068
Number of successful extensions: 3731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3630
Number of HSP's gapped (non-prelim): 84
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.