Guide to the Human Genome
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Name: FBXO45 Sequence: fasta or formatted (286aa) NCBI GI: 157743247
Description:

F-box protein 45

Referenced in:

Cullins and SCF Complexes
Receptor Tyrosine Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         32           2
 C cysteine            3.5         10           1
 D aspartate           3.5         10           2
 E glutamate           5.6         16           2
 F phenylalanine       3.1          9           1
 G glycine            12.6         36           3
 H histidine           2.1          6           1
 I isoleucine          3.5         10           1
 K lysine              3.8         11           2
 L leucine             9.8         28           2
 M methionine          1.0          3           1
 N asparagine          4.9         14           2
 P proline             4.2         12           1
 Q glutamine           2.4          7           1
 R arginine            5.9         17           1
 S serine              7.0         20           1
 T threonine           3.5         10           1
 V valine              6.3         18           1
 W tryptophan          2.4          7           2
 Y tyrosine            3.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 45 
SPSB2                 0.237   splA/ryanodine receptor domain and SOCS box contain...
SPSB2                 0.237   splA/ryanodine receptor domain and SOCS box contain...
SPSB2                 0.237   splA/ryanodine receptor domain and SOCS box containi...
SPSB4                 0.221   splA/ryanodine receptor domain and SOCS box containi...
SPSB1                 0.205   splA/ryanodine receptor domain and SOCS box containi...
SPSB3                 0.042   splA/ryanodine receptor domain and SOCS box containi...
MAF                   0.040   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.040   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
SHOX2                 0.033   short stature homeobox 2 isoform a 
FOXD1                 0.033   forkhead box D1 
ARID1B                0.033   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.033   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.033   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
FZD8                  0.033   frizzled 8 
PURA                  0.032   purine-rich element binding protein A 
LRCH2                 0.032   leucine-rich repeats and calponin homology (CH) dom...
POU4F1                0.030   POU domain, class 4, transcription factor 1 
RFX1                  0.028   regulatory factor X1 
SIX3                  0.028   sine oculis homeobox homolog 3 
SLC4A5                0.028   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.028   sodium bicarbonate transporter 4 isoform c 
FBXO10                0.028   F-box protein 10 
EVX2                  0.028   even-skipped homeobox 2 
MPND                  0.026   MPN domain containing isoform 2 
MPND                  0.026   MPN domain containing isoform 1 
FUSSEL18              0.026   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.026   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.026   PREDICTED: functional smad suppressing element 18 [...
ZIC2                  0.026   zinc finger protein of the cerebellum 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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