Guide to the Human Genome
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Name: NXNL1 Sequence: fasta or formatted (212aa) NCBI GI: 19923987
Description:

nucleoredoxin-like 1

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         17           2
 C cysteine            1.9          4           1
 D aspartate           9.0         19           2
 E glutamate           9.0         19           2
 F phenylalanine       6.6         14           2
 G glycine             8.5         18           5
 H histidine           0.5          1           1
 I isoleucine          1.9          4           1
 K lysine              3.3          7           2
 L leucine            13.2         28           2
 M methionine          0.9          2           1
 N asparagine          2.4          5           2
 P proline             4.2          9           1
 Q glutamine           5.7         12           2
 R arginine            9.4         20           2
 S serine              3.8          8           1
 T threonine           2.8          6           1
 V valine              6.6         14           3
 W tryptophan          0.9          2           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleoredoxin-like 1 
NXNL2                 0.189   nucleoredoxin-like 2 isoform 1 
NXN                   0.107   nucleoredoxin 
NXNL2                 0.079   nucleoredoxin-like 2 isoform 2 
TLX1                  0.030   T-cell leukemia homeobox 1 
DDX50                 0.027   nucleolar protein GU2 
SHOX2                 0.017   short stature homeobox 2 isoform a 
FAM98B                0.017   family with sequence similarity 98, member B isofor...
LOC100129463          0.017   PREDICTED: hypothetical protein 
LOC100129463          0.017   PREDICTED: hypothetical protein 
LOC100129463          0.017   PREDICTED: hypothetical protein 
LOC100129463          0.017   PREDICTED: hypothetical protein 
HABP4                 0.015   hyaluronan binding protein 4 
C2orf21               0.015   chromosome 2 open reading frame 21 isoform 1 
LOC100131851          0.015   PREDICTED: hypothetical protein 
FZD8                  0.015   frizzled 8 
ZSWIM6                0.012   zinc finger, SWIM-type containing 6 
POU4F1                0.012   POU domain, class 4, transcription factor 1 
DRAP1                 0.012   DR1-associated protein 1 
LOC100131851          0.012   PREDICTED: hypothetical protein 
LOC100130751          0.012   PREDICTED: hypothetical protein 
RHOU                  0.012   ras homolog gene family, member U 
POU3F3                0.012   POU class 3 homeobox 3 
FAM9A                 0.012   family with sequence similarity 9, member A 
CCDC85C               0.010   coiled-coil domain containing 85C 
SIX3                  0.010   sine oculis homeobox homolog 3 
SNRNP70               0.010   U1 small nuclear ribonucleoprotein 70 kDa 
EVX2                  0.010   even-skipped homeobox 2 
HSPA2                 0.010   heat shock 70kDa protein 2 
ANKS1A                0.010   ankyrin repeat and sterile alpha motif domain conta...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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