Guide to the Human Genome
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Name: TTN Sequence: fasta or formatted (26926aa) NCBI GI: 110349715
Description:

titin isoform N2-B

Referenced in:

Fibronectin Family
Muscle
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [27051aa] titin isoform novex-1
alt prot [27118aa] titin isoform novex-2
alt prot [33423aa] titin isoform N2-A
alt prot [5604aa] titin isoform novex-3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1       1632           3
 C cysteine            1.3        356           2
 D aspartate           5.3       1431           3
 E glutamate           8.6       2323           4
 F phenylalanine       2.5        673           3
 G glycine             6.4       1734           3
 H histidine           1.4        387           2
 I isoleucine          6.2       1657           3
 K lysine              8.2       2201           3
 L leucine             6.3       1692           3
 M methionine          1.2        335           2
 N asparagine          3.3        896           2
 P proline             6.8       1834           4
 Q glutamine           2.7        724           2
 R arginine            5.2       1403           4
 S serine              7.1       1911           4
 T threonine           7.7       2086           5
 V valine              9.0       2420           3
 W tryptophan          1.5        401           2
 Y tyrosine            3.1        830           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   titin isoform N2-B 
TTN                   0.960   titin isoform novex-1 
TTN                   0.959   titin isoform novex-2 
TTN                   0.839   titin isoform N2-A 
TTN                   0.124   titin isoform novex-3 
OBSCN                 0.013   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.013   obscurin, cytoskeletal calmodulin and titin-interac...
OBSL1                 0.008   obscurin-like 1 
IGSF22                0.007   immunoglobulin superfamily, member 22 
MYLK                  0.006   myosin light chain kinase isoform 1 
MYLK                  0.006   myosin light chain kinase isoform 2 
IGFN1                 0.006   immunoglobulin-like and fibronectin type III domain...
MYBPC1                0.005   myosin binding protein C, slow type isoform 4 
MYBPC1                0.005   myosin binding protein C, slow type isoform 2 
MYBPC1                0.005   myosin binding protein C, slow type isoform 1 
HMCN1                 0.005   hemicentin 1 
MYLK                  0.005   myosin light chain kinase isoform 3A 
MYLK                  0.005   myosin light chain kinase isoform 3B 
MYBPC1                0.005   myosin binding protein C, slow type isoform 3 
MYBPC3                0.005   myosin binding protein C, cardiac 
MYBPC2                0.005   myosin binding protein C, fast type 
MYOM3                 0.005   myomesin family, member 3 
PALLD                 0.005   palladin 
MYOM2                 0.005   myomesin 2 
MYOM1                 0.004   myomesin 1 isoform b 
MYOM1                 0.004   myomesin 1 isoform a 
SDK2                  0.004   sidekick 2 
HMCN2                 0.004   PREDICTED: hemicentin 2 
MYLK3                 0.004   myosin light chain kinase 3 
HMCN2                 0.004   PREDICTED: hemicentin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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