Guide to the Human Genome
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Name: AGMAT Sequence: fasta or formatted (352aa) NCBI GI: 37537722
Description:

agmatine ureohydrolase (agmatinase)

Referenced in:

Urea Cycle, Nitric Oxide, and Polyamines

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         31           2
 C cysteine            2.8         10           1
 D aspartate           5.4         19           1
 E glutamate           4.0         14           2
 F phenylalanine       2.6          9           1
 G glycine            10.5         37           2
 H histidine           1.7          6           1
 I isoleucine          4.3         15           2
 K lysine              2.6          9           2
 L leucine            10.8         38           2
 M methionine          3.1         11           2
 N asparagine          2.8         10           1
 P proline             8.5         30           2
 Q glutamine           4.0         14           2
 R arginine            7.1         25           2
 S serine              5.4         19           2
 T threonine           5.4         19           2
 V valine              7.4         26           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   agmatine ureohydrolase (agmatinase) 
ARG2                  0.088   arginase 2 precursor 
ARG1                  0.084   arginase 1 
PYGO2                 0.013   pygopus homolog 2 
LOC100132345          0.012   PREDICTED: hypothetical protein 
INSM1                 0.012   insulinoma-associated 1 
KLF17                 0.010   zinc finger protein 393 
MEGF9                 0.010   multiple EGF-like-domains 9 
LOC100292143          0.010   PREDICTED: hypothetical protein 
LOC100287293          0.010   PREDICTED: hypothetical protein XP_002343924 
LOC100132261          0.010   PREDICTED: similar to hCG2023245 
LOC651856             0.010   PREDICTED: similar to hCG2023245 
C20orf201             0.009   hypothetical protein LOC198437 
C1orf113              0.009   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.009   SH3 domain-containing protein C1orf113 isoform 2 [H...
ARTN                  0.009   neurotrophic factor artemin isoform 2 
ARTN                  0.009   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.009   neurotrophic factor artemin isoform 3 precursor [Ho...
ARTN                  0.009   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.009   neurotrophic factor artemin isoform 3 precursor [Ho...
APC2                  0.009   adenomatosis polyposis coli 2 
LOC100293977          0.007   PREDICTED: similar to major histocompatibility comp...
LOC100294191          0.007   PREDICTED: similar to major histocompatibility comp...
MUC17                 0.007   mucin 17 
CELSR3                0.007   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
C16orf7               0.007   chromosome 16 open reading frame 7 
CPSF1                 0.007   cleavage and polyadenylation specific factor 1, 160k...
NXN                   0.007   nucleoredoxin 
LOC100291914          0.007   PREDICTED: hypothetical protein XP_002345991 
LOC100290611          0.007   PREDICTED: hypothetical protein XP_002346841 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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