Search of human proteins with 32880231

Search of human proteins with 32880231

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32880231 vestigial-like 2 isoform 1 [Homo sapiens]
         (317 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32880231 vestigial-like 2 isoform 1 [Homo sapiens]                 671   0.0  
gi|23592242 vestigial-like 2 isoform 2 [Homo sapiens]                 270   9e-73
gi|56550035 colon carcinoma related protein [Homo sapiens]            154   8e-38
gi|7706741 vestigial like 1 [Homo sapiens]                             65   8e-11
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]                54   2e-07
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    53   4e-07
gi|55750053 atrophin-1 [Homo sapiens]                                  50   2e-06
gi|55750041 atrophin-1 [Homo sapiens]                                  50   2e-06
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]              49   4e-06
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]             47   3e-05
gi|32307177 forkhead box G1 [Homo sapiens]                             47   3e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni...    46   4e-05
gi|61966923 forkhead box B2 [Homo sapiens]                             46   4e-05
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]         44   1e-04
gi|110815800 WD repeat domain 32 [Homo sapiens]                        43   4e-04
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         43   4e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    43   4e-04
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo...    42   5e-04
gi|21618325 forkhead box E1 [Homo sapiens]                             42   5e-04
gi|40807447 papillary renal cell carcinoma translocation-associa...    42   5e-04
gi|40807450 papillary renal cell carcinoma translocation-associa...    42   5e-04
gi|217416343 fibrosin-like 1 [Homo sapiens]                            42   0.001
gi|23308699 transcription factor MAFB [Homo sapiens]                   41   0.001
gi|21361937 proline rich 7 (synaptic) [Homo sapiens]                   41   0.001
gi|239757043 PREDICTED: functional smad suppressing element 18 [...    41   0.002
gi|153791535 general control of amino acid synthesis 5-like 2 [H...    41   0.002
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       41   0.002
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       41   0.002
gi|122937424 one cut homeobox 3 [Homo sapiens]                         41   0.002
gi|239751555 PREDICTED: functional smad suppressing element 18 [...    40   0.002

>gi|32880231 vestigial-like 2 isoform 1 [Homo sapiens]
          Length = 317

 Score =  671 bits (1730), Expect = 0.0
 Identities = 317/317 (100%), Positives = 317/317 (100%)

Query: 1   MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60
           MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP
Sbjct: 1   MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60

Query: 61  ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120
           ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS
Sbjct: 61  ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120

Query: 121 KAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSELPFAAADPYSPA 180
           KAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSELPFAAADPYSPA
Sbjct: 121 KAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSELPFAAADPYSPA 180

Query: 181 ALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYG 240
           ALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYG
Sbjct: 181 ALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYG 240

Query: 241 PLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFASPSGDVAQGLGL 300
           PLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFASPSGDVAQGLGL
Sbjct: 241 PLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFASPSGDVAQGLGL 300

Query: 301 SVDSARRYSLCGASLLS 317
           SVDSARRYSLCGASLLS
Sbjct: 301 SVDSARRYSLCGASLLS 317


>gi|23592242 vestigial-like 2 isoform 2 [Homo sapiens]
          Length = 143

 Score =  270 bits (691), Expect = 9e-73
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60
           MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP
Sbjct: 1   MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60

Query: 61  ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120
           ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS
Sbjct: 61  ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120

Query: 121 KAPRSSGPWR 130
           KAPRSSGPWR
Sbjct: 121 KAPRSSGPWR 130



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 13/13 (100%), Positives = 13/13 (100%)

Query: 305 ARRYSLCGASLLS 317
           ARRYSLCGASLLS
Sbjct: 131 ARRYSLCGASLLS 143


>gi|56550035 colon carcinoma related protein [Homo sapiens]
          Length = 326

 Score =  154 bits (390), Expect = 8e-38
 Identities = 133/348 (38%), Positives = 153/348 (43%), Gaps = 118/348 (33%)

Query: 1   MSCLDVMYQVYGPPQPYFAAAYTP-----------YHQ---------KLAYYSKMQEAQE 40
           MSC +VMY     PQPY A+ Y P           Y+Q         KLA +SKMQ++ E
Sbjct: 1   MSCAEVMYH----PQPYGASQYLPNPMAATTCPTAYYQPAPQPGQQKKLAVFSKMQDSLE 56

Query: 41  CNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVD 100
               PS                  EEE   EK++P E EY+NSRCVLFTYFQGDI SVVD
Sbjct: 57  VTL-PSKQEEED------------EEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVD 103

Query: 101 EHFSRALSQPSSYSPSCTSSKAPRSSGP-WRDCSFPMSQR-SFPASFWNSAYQAPVPPPL 158
           EHFSRAL Q  +  P    SK+     P WRD S   SQR SFP SFW S+YQ P  P L
Sbjct: 104 EHFSRALGQAITLHPESAISKSKMGLTPLWRDSSALSSQRNSFPTSFWTSSYQPPPAPCL 163

Query: 159 GSPLATAHSELP---FAAADPYSPAALHGHLHQ-------GATEPW-------------- 194
           G          P   F+AADP SP   H +LHQ         +E W              
Sbjct: 164 GGVHPDFQVTGPPGTFSAADP-SPWPGH-NLHQTGPAPPPAVSESWPYPLTSQVSPSYSH 221

Query: 195 ---------------HHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRY 239
                          HH H HH H HHP A G AL                     DP Y
Sbjct: 222 MHDVYMRHHHPHAHMHHRHRHHHHHHHPPA-GSAL---------------------DPSY 259

Query: 240 GPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEP-----AGAAWAG 282
           GPLLMP+        A  PA     P C+++ K EP     A +AWAG
Sbjct: 260 GPLLMPS-----VHAARIPA-----PQCDIT-KTEPTTVTSATSAWAG 296


>gi|7706741 vestigial like 1 [Homo sapiens]
          Length = 258

 Score = 65.1 bits (157), Expect = 8e-11
 Identities = 53/144 (36%), Positives = 73/144 (50%), Gaps = 20/144 (13%)

Query: 72  KERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSSKAPRSSGPWRD 131
           K++P + E+ NSRCVLFTYFQGDISSVVDEHFSRALS   S      SS++        D
Sbjct: 15  KQKPIKTEW-NSRCVLFTYFQGDISSVVDEHFSRALSNIKSPQELTPSSQSEGVMLKNDD 73

Query: 132 CSFPMSQRSFPASFWNSAYQAPVPP-PLGSPLATAHSELPF-AAADPYSPA-ALHGHLHQ 188
              P   R      ++S +  P P  P+ +  A  +  +P   A + +SP+ A    +  
Sbjct: 74  SMSPNQWR------YSSPWTKPQPEVPVTNRAANCNLHVPGPMAVNQFSPSLARRASVRP 127

Query: 189 GATEPWHHA--------HPHHAHP 204
           G  E WH +         P ++HP
Sbjct: 128 G--ELWHFSSLAGTSSLEPGYSHP 149


>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
          Length = 424

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 43/140 (30%), Positives = 56/140 (40%), Gaps = 19/140 (13%)

Query: 149 AYQAPVPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPH-HP 207
           ++  PVPPP   P       +P A   P  P    GH    A  P    HP H H H HP
Sbjct: 242 SFPPPVPPPGALPPG-----IPPAMPPPPMPPGAAGHGPPSAGTPGA-GHPGHGHSHPHP 295

Query: 208 YALGGALGAQAAPYPRPAAVHEVY-APHF--DPRYGPLLMPAASGRPARLATAPAPAPGS 264
           +  GG       P+P  + +   +  PH    P  GP   P + G+P        P PG 
Sbjct: 296 FPPGGM------PHPGMSQMQLAHHGPHGLGHPHAGP---PGSGGQPPPRPPPGMPHPGP 346

Query: 265 PPCELSGKGEPAGAAWAGPG 284
           PP  +  +G P G+    PG
Sbjct: 347 PPMGMPPRGPPFGSPMGHPG 366



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 24/90 (26%), Positives = 27/90 (30%), Gaps = 11/90 (12%)

Query: 153 PVPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALGG 212
           P PPP+G P        P     P  P  + G        P    H +   P  P     
Sbjct: 344 PGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRG------PPPLMPPHGYTGPPRPP----- 392

Query: 213 ALGAQAAPYPRPAAVHEVYAPHFDPRYGPL 242
             G Q  P P P        P   P  GPL
Sbjct: 393 PYGYQRGPLPPPRPTPRPPVPPRGPLRGPL 422


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 88/334 (26%), Positives = 104/334 (31%), Gaps = 74/334 (22%)

Query: 5    DVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEA--QECNASPSSSGSGSSSFSSQTPAS 62
            ++ Y+    P P      T Y   L    ++  A  Q  +AS S    G +S     P  
Sbjct: 795  EMEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPGPGGLASLGKHRPKG 854

Query: 63   IKEEEGS--------PEKERP---PEAEYINSRCVLFTYFQGDISSVVDEH--------- 102
                E S        P  ERP   P    +  R       Q  I +  D+          
Sbjct: 855  FFATESSFDPHHRAQPSYERPSFLPPGPGLMLR-------QKSIGAAEDDRPYLAPPAMK 907

Query: 103  FSRALSQPSSYS---PSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLG 159
            FSR+LS P S     P  TS   P  S P    S   S R  P     S    P  P  G
Sbjct: 908  FSRSLSVPGSEDIPPPPTTSPPEPPYSTPPVPSS---SGRLTP-----SPRGGPFNPGSG 959

Query: 160  SPLATAHSELPFAAADPYSPAALHGH-----LHQGATEPWHHAHPHHAHPHHPYALGGAL 214
             PL  +    P +   P  P    G       H G   P HH  PHH H H P       
Sbjct: 960  GPLPASS---PASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAP------- 1009

Query: 215  GAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKGE 274
                 P P     H  + P  +    P         P RLA  P P         S +G 
Sbjct: 1010 ----PPQPHHHHAHPPHPPEMETGGSP------DDPPPRLALGPQP---------SLRGW 1050

Query: 275  PAGAAWAGPGGPFASPSGDVAQGLGLSVDSARRY 308
              G     PG P  S  G    G G S   A RY
Sbjct: 1051 RGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRY 1084


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 83/315 (26%), Positives = 114/315 (36%), Gaps = 81/315 (25%)

Query: 42  NASPSSSGSGSSSFSSQTPASIKEEEG------SPEK---------ERPPEAEYINSRCV 86
           NAS S  G G+       P+     +G       PEK           PP +    +  +
Sbjct: 312 NASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPM 371

Query: 87  LFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSSKAPRSSG-PWRDCSFP---------- 135
            F Y     SS        A +  SS S S ++S  P S   P    SFP          
Sbjct: 372 RFPYSSSSSSS--------AAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQ 423

Query: 136 ---MSQRSFPA-SFWNSAYQAPVPPPLGSPLATAHSEL-PF-----AAADPYSPAALHGH 185
               +Q S P+ + W+     P PPP G  LA +++   PF     A +  + P + H H
Sbjct: 424 PPKYTQPSLPSQAVWSQG--PPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481

Query: 186 LHQGATEPW------------HHAH----PHHAHPH----------HPYALGGALGAQAA 219
            HQ   +              HH +    P  A PH          HPYA+  +LG+   
Sbjct: 482 HHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGS-LR 540

Query: 220 PYPRPAAVHEVYAPHFDPRY---GPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPA 276
           PYP P   H +  PH    Y   GP   P +S   +  +T+    P S P    G   P 
Sbjct: 541 PYP-PGPAH-LPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQG---PQ 595

Query: 277 GAAWAGPGGPFASPS 291
           GA +  P  P  + S
Sbjct: 596 GAPYPFPPVPTVTTS 610



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 43/181 (23%), Positives = 63/181 (34%), Gaps = 36/181 (19%)

Query: 110 PSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSEL 169
           P   +P   SS     + P +  + P+   + P++          PPP   P  T +  L
Sbjct: 254 PPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSA----------PPPANFPHVTPN--L 301

Query: 170 PFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHE 229
           P        P AL    +  A+ P   A P   H   P+A+G  +G              
Sbjct: 302 P-------PPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP---------- 344

Query: 230 VYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFAS 289
                  P  GP L P+    P   ++APAP P   P   S     A ++ +      AS
Sbjct: 345 ------GPEKGPTLAPSPHSLPPASSSAPAP-PMRFPYSSSSSSSAAASSSSSSSSSSAS 397

Query: 290 P 290
           P
Sbjct: 398 P 398



 Score = 35.0 bits (79), Expect = 0.088
 Identities = 48/183 (26%), Positives = 64/183 (34%), Gaps = 12/183 (6%)

Query: 102 HFSRALSQPSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSP 161
           H   + SQ     P  +SS    SS      S+P S  S       + Y  P  P + + 
Sbjct: 553 HSQVSYSQAGPNGPPVSSSS--NSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTS 610

Query: 162 LATAHSELPFAAADP--YSPAALHGHLHQGATEP----WHHAHPHHAHPHHP--YALGGA 213
            AT  + +   A+ P  Y  A+  G    G   P    +  A P    P  P  +  G  
Sbjct: 611 SATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTP 670

Query: 214 LGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKG 273
            G +    P      +  +P   P  GPL     SG P+      APA G P      K 
Sbjct: 671 PGYRGTSPPAGPGTFKPGSPTVGP--GPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQ 728

Query: 274 EPA 276
           EPA
Sbjct: 729 EPA 731


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 83/315 (26%), Positives = 114/315 (36%), Gaps = 81/315 (25%)

Query: 42  NASPSSSGSGSSSFSSQTPASIKEEEG------SPEK---------ERPPEAEYINSRCV 86
           NAS S  G G+       P+     +G       PEK           PP +    +  +
Sbjct: 312 NASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPM 371

Query: 87  LFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSSKAPRSSG-PWRDCSFP---------- 135
            F Y     SS        A +  SS S S ++S  P S   P    SFP          
Sbjct: 372 RFPYSSSSSSS--------AAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQ 423

Query: 136 ---MSQRSFPA-SFWNSAYQAPVPPPLGSPLATAHSEL-PF-----AAADPYSPAALHGH 185
               +Q S P+ + W+     P PPP G  LA +++   PF     A +  + P + H H
Sbjct: 424 PPKYTQPSLPSQAVWSQG--PPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481

Query: 186 LHQGATEPW------------HHAH----PHHAHPH----------HPYALGGALGAQAA 219
            HQ   +              HH +    P  A PH          HPYA+  +LG+   
Sbjct: 482 HHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGS-LR 540

Query: 220 PYPRPAAVHEVYAPHFDPRY---GPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPA 276
           PYP P   H +  PH    Y   GP   P +S   +  +T+    P S P    G   P 
Sbjct: 541 PYP-PGPAH-LPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQG---PQ 595

Query: 277 GAAWAGPGGPFASPS 291
           GA +  P  P  + S
Sbjct: 596 GAPYPFPPVPTVTTS 610



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 43/181 (23%), Positives = 63/181 (34%), Gaps = 36/181 (19%)

Query: 110 PSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSEL 169
           P   +P   SS     + P +  + P+   + P++          PPP   P  T +  L
Sbjct: 254 PPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSA----------PPPANFPHVTPN--L 301

Query: 170 PFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHE 229
           P        P AL    +  A+ P   A P   H   P+A+G  +G              
Sbjct: 302 P-------PPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP---------- 344

Query: 230 VYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFAS 289
                  P  GP L P+    P   ++APAP P   P   S     A ++ +      AS
Sbjct: 345 ------GPEKGPTLAPSPHSLPPASSSAPAP-PMRFPYSSSSSSSAAASSSSSSSSSSAS 397

Query: 290 P 290
           P
Sbjct: 398 P 398



 Score = 35.0 bits (79), Expect = 0.088
 Identities = 48/183 (26%), Positives = 64/183 (34%), Gaps = 12/183 (6%)

Query: 102 HFSRALSQPSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSP 161
           H   + SQ     P  +SS    SS      S+P S  S       + Y  P  P + + 
Sbjct: 553 HSQVSYSQAGPNGPPVSSSS--NSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTS 610

Query: 162 LATAHSELPFAAADP--YSPAALHGHLHQGATEP----WHHAHPHHAHPHHP--YALGGA 213
            AT  + +   A+ P  Y  A+  G    G   P    +  A P    P  P  +  G  
Sbjct: 611 SATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTP 670

Query: 214 LGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKG 273
            G +    P      +  +P   P  GPL     SG P+      APA G P      K 
Sbjct: 671 PGYRGTSPPAGPGTFKPGSPTVGP--GPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQ 728

Query: 274 EPA 276
           EPA
Sbjct: 729 EPA 731


>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
          Length = 727

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 54/208 (25%), Positives = 74/208 (35%), Gaps = 27/208 (12%)

Query: 100 DEHFSRALSQPSSYSPSCTS---------SKAPRSSGPWRDCSFPMSQRSFPASFWNSAY 150
           DE   R  S P  ++P CTS         S  P ++      S P++  +   +  +++ 
Sbjct: 291 DEEALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASAST 350

Query: 151 QAPVPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATEP--------WHHAHPHHA 202
            AP   P  SP   A S  P  AA   S  A H    +G   P             P   
Sbjct: 351 TAPASSPADSPRPQASSYSPAVAAS--SAPATHTSYSEGPAAPAPKPRVVTTASIRPSVY 408

Query: 203 HPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAP 262
            P        + GA  +P P   +    Y P   P Y P  +P  +  PA  A  P+PAP
Sbjct: 409 QPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAP-AYTPSPAP 467

Query: 263 GSPPCELSGKGEPAGAAWAGPGGPFASP 290
              P        P+ A   GP  P + P
Sbjct: 468 NYNPA-------PSVAYSGGPAEPASRP 488



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 204 PHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPG 263
           PH         G+  AP P P A      P   P   P   PA S   A  + A A  PG
Sbjct: 104 PHQKDPALDTNGSLVAPSPSPEARASPGTPG-TPELRPTFSPAFSRPSAFSSLAEASDPG 162

Query: 264 SPPCELSGKGEPAGA 278
            P   L  K  P GA
Sbjct: 163 PPRASLRAKTSPEGA 177


>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
          Length = 617

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 63/228 (27%), Positives = 79/228 (34%), Gaps = 45/228 (19%)

Query: 100 DEHFSRALSQPSSYSPSCTSSKAPR-----SSGPWRDCSFPMSQRSFPASFWNSAYQAPV 154
           +E   R+  Q SSYSP+  +S AP      S GP      P  +    AS   S YQ PV
Sbjct: 245 EEALRRSRPQASSYSPAVAASSAPATHTSYSEGP--AAPAPKPRVVTTASIRPSVYQ-PV 301

Query: 155 PPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALGGAL 214
           P    SP   A+      +  PY+P          +  P +   P  A+   P       
Sbjct: 302 PASTYSPSPGAN-----YSPTPYTP----------SPAPAYTPSPAPAYTPSPV------ 340

Query: 215 GAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAP----------APAPGS 264
                P P PA     Y P   P Y P    A SG PA  A+ P            APG 
Sbjct: 341 -PTYTPSPAPA-----YTPSPAPNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGK 394

Query: 265 PPCELSGKGEPAGAAWAGPGGPFASPSGDVAQGLGLSVDSARRYSLCG 312
               +S +  P G     P GP   P             ++ R  LCG
Sbjct: 395 STTSISKQTLPRGGPAYTPAGPQVPPLARGTVQRAERFPASSRTPLCG 442


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 42/124 (33%), Positives = 46/124 (37%), Gaps = 12/124 (9%)

Query: 181 ALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEV----YAPHFD 236
           A HGH +    +  HH H HH HP  P         Q  P P P    +      AP  D
Sbjct: 35  ASHGHHNSHHPQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAAD 94

Query: 237 PRYGP--LLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGA-AWAGPGGPFASPSGD 293
              GP  LL+P     P   A   A A G     L GKGEP G      P GP     G 
Sbjct: 95  DDKGPQQLLLPPPPPPPPAAALDGAKADG-----LGGKGEPGGGPGELAPVGPDEKEKGA 149

Query: 294 VAQG 297
            A G
Sbjct: 150 GAGG 153


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 71/281 (25%), Positives = 96/281 (34%), Gaps = 24/281 (8%)

Query: 20   AAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAE 79
            A++ P +      SK   A   + +P S   G+ + S+ TP S K     P KE P  + 
Sbjct: 833  ASFLPENSLSFQGSKDSPATTHSPTPPSP-KGAPTPSAVTPLSPKGVT-LPPKETPTPS- 889

Query: 80   YINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSSKAPRS--------SGPWRD 131
                  V+   F  +  +      + ALS  SS      ++ AP+           P   
Sbjct: 890  ------VVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPP 943

Query: 132  CSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGAT 191
             + P S +  PA+   S   AP PP    P        P     P  PAA       G  
Sbjct: 944  AATPPSPKGGPAT--PSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPA 1001

Query: 192  EPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRP 251
             P     P       P   G      A P+P+ A+      P   P+  P   P   G P
Sbjct: 1002 TPSPKGAPTPPAVTPPSPKGSPA---ATPFPKGASTPPAATPP-SPKGSPAATPLPKGAP 1057

Query: 252  AR-LATAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFASPS 291
                AT P+P  G     L G   P  A    P G  A+PS
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPS 1098



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 58/196 (29%), Positives = 69/196 (35%), Gaps = 24/196 (12%)

Query: 106  ALSQPSSYSPSCTSSKA----PRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSP 161
            A + P++  PS   S A    P+ +      + P S +  PA+   S   AP PP    P
Sbjct: 1032 ASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP-SPKGGPAT--PSLKGAPTPPAATPP 1088

Query: 162  LATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYAL-GGALGAQAAP 220
                    P     P  PAA       G   P     PH   P  P A      G  A P
Sbjct: 1089 SPKGGPATPSPKGAPMPPAATPPSPKGGLATP-----PHKGAPTTPAATPPSPKGGLATP 1143

Query: 221  YPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCEL---SGKGEPA- 276
             P+ A       P   P+ G L  P   G P    T PA  P SP   L   S KG P  
Sbjct: 1144 PPKGAPTTPAATPP-SPK-GGLATPPPKGAP----TTPAATPPSPKGGLATPSPKGAPTT 1197

Query: 277  -GAAWAGPGGPFASPS 291
              A    P G  A+PS
Sbjct: 1198 PAATPPSPKGGLATPS 1213



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 50/186 (26%), Positives = 63/186 (33%), Gaps = 10/186 (5%)

Query: 107  LSQPSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPV-PPPLGSPLATA 165
            L+ PS      T +  P S         P    + PA+   S    P  PPP G+P    
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPT--- 1265

Query: 166  HSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPA 225
                P AA  P     L    H+GA  P     P            GA    AA  P P 
Sbjct: 1266 ----PPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK 1321

Query: 226  AVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKG-EPAGAAWAGPG 284
                   P   P    +  P+  G P   AT P+ + G P    S +G  P  A  +  G
Sbjct: 1322 GSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS-SKGGPTTPSSKEGPTPPAATPSHKG 1380

Query: 285  GPFASP 290
            GP  +P
Sbjct: 1381 GPAMTP 1386



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 40/143 (27%), Positives = 47/143 (32%), Gaps = 8/143 (5%)

Query: 152  APVPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALG 211
            AP  P    P        P     P  PAA    L  G   P H   P+ A    P   G
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKG 1299

Query: 212  GALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAP--APGSPPCEL 269
            G   +     P P A     A    P+  P   P          T P+P   P  P    
Sbjct: 1300 GPATSPPKGAPTPPA-----ATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354

Query: 270  SGKGEP-AGAAWAGPGGPFASPS 291
            S KG P   ++  GP  P A+PS
Sbjct: 1355 SSKGGPTTPSSKEGPTPPAATPS 1377



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 49/205 (23%), Positives = 64/205 (31%), Gaps = 24/205 (11%)

Query: 114  SPSCTSSKAPRSSGP--WRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSELPF 171
            +PS   + +P +  P  ++    P      PA    S  +AP PP +  P        P 
Sbjct: 1573 TPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPA 1632

Query: 172  AAADPYSPAALHGHLHQGATEPWH-----HAHPHHAHPHHPYALGGALGAQAAPYPRPAA 226
                P SP      L    T P        A    A    P   G     +    P P +
Sbjct: 1633 PKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPES 1692

Query: 227  VHEVYAPHFDPRYGPLLM-------------PAASGRPARLATAPAPAPGSPPCELSGKG 273
               + AP    R GP                 A +G    L+T  APAP  P  + S K 
Sbjct: 1693 TPIITAP---TRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTV-APAPLLPVQKDSSKT 1748

Query: 274  EPAGAAWAGPGGPFASPSGDVAQGL 298
                 A   P GP A P    +  L
Sbjct: 1749 AKGKDASHSPKGPLAPPESKASTPL 1773


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 40/130 (30%), Positives = 49/130 (37%), Gaps = 21/130 (16%)

Query: 183 HGHLHQGATE------------PWHHAHPHHAHPHHPYA--LGGALGAQAAPYPRPAAVH 228
           H HLH G+T+            P HH HPHH H HH  A         Q  P P P   H
Sbjct: 116 HTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPH 175

Query: 229 EVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELS--GKGEPAGAAWAGPGGP 286
            V+  H  P   P   P    +P +      P   S P + S  GK + A A  A     
Sbjct: 176 MVHYFHQQPPTAPQPPPHLPSQPPQ-----QPPQQSQPQQPSHPGKMQEAAAVAAAAAAA 230

Query: 287 FASPSGDVAQ 296
            A+  G V +
Sbjct: 231 AAAAVGSVGR 240


>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
          Length = 365

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 53/191 (27%), Positives = 66/191 (34%), Gaps = 20/191 (10%)

Query: 106 ALSQPSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATA 165
           A S+PS + P+   +  P    P                F  S   +  PPPL  P    
Sbjct: 163 AQSRPSPFRPAAPKAGPPGLVHPL---------------FSPSHLTSKTPPPLYLPTEGR 207

Query: 166 HSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALGG-ALGAQ--AAPYP 222
            S+LP   A P         L+ G   P   A P       P+  GG  +GA+  A   P
Sbjct: 208 RSDLPGGLAGPRGGLNTSRSLYSGLQNPCSTATPGPPLGSFPFLPGGPPVGAEAWARRVP 267

Query: 223 RPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEP-AGAAWA 281
           +PAA               L  P A     R +  P  +PG P   L G G P AG  W 
Sbjct: 268 QPAAPPRRPPQSASSLSASLRPPGAPATFLRPSPIPCSSPG-PWQSLCGLGPPCAGCPWP 326

Query: 282 GPGGPFASPSG 292
             G    SP G
Sbjct: 327 TAGPGRRSPGG 337


>gi|110815800 WD repeat domain 32 [Homo sapiens]
          Length = 559

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 52/147 (35%), Positives = 60/147 (40%), Gaps = 26/147 (17%)

Query: 176 PYSPAALHGHLHQGATEPWHHAHPHHA----HPHHPYALGGALGAQAAPYPRPA-AVHEV 230
           P+SP    G    GA EP  H     A     P HP       GA A   P PA +    
Sbjct: 6   PHSPGG-DGSAGAGAEEPTPHEGQAAATGPPSPLHP-------GADATHPPPPARSPRRP 57

Query: 231 YAPHFDP--RYGPLLMPAASGRPARLATAPA-PAPGSPPCELSG-----KGEPAGAAWAG 282
            AP   P  R G L +P A    +  A+AP  P+P SPPC   G     K        AG
Sbjct: 58  GAPSLSPAPRSGELGLPGAP--ESSTASAPGEPSPPSPPCRRPGPDCRAKSRGRHGLGAG 115

Query: 283 PGGPFASPSG---DVAQGLGLSVDSAR 306
            GGP A   G   + + G GL VD AR
Sbjct: 116 LGGPGARLFGWLKERSLGRGLFVDPAR 142


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 61/241 (25%), Positives = 85/241 (35%), Gaps = 24/241 (9%)

Query: 36   QEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINS--RCVLFTYFQG 93
            Q+  E + S SSS SGSSS SS + +S  E EG  E ++  +         C   +    
Sbjct: 2551 QDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAA 2610

Query: 94   DISSVVDEHFSRALSQPSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAP 153
              +S      S + S  SS S S +SS +  SS      S   S  S  +S  +S+  + 
Sbjct: 2611 SPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2670

Query: 154  VPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAH--------------- 198
                  S  ++     P   A P + AAL     + A +    AH               
Sbjct: 2671 STTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPP 2730

Query: 199  PHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAP 258
            P    P  P A  GA         RP     V+ P          +P+   RP   A  P
Sbjct: 2731 PQPTQPLQPKAQAGAKS-------RPKKREGVHLPTTKELAKRQRLPSVENRPKIAAFLP 2783

Query: 259  A 259
            A
Sbjct: 2784 A 2784



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 38/164 (23%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 33   SKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQ 92
            S+       ++S SSS S SSS SS + +S      S        +   +S     +   
Sbjct: 2607 SRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2666

Query: 93   GDISSVVDEHFSRALSQPSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAY-- 150
               SS  DE         SS S    ++ AP ++GP    + P            SA+  
Sbjct: 2667 SSSSSTTDE--------DSSCSSDDEAAPAP-TAGPSAQAALPTKATKQAGKARPSAHSP 2717

Query: 151  --QAPVPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATE 192
              + P P P   P        P A A   S       +H   T+
Sbjct: 2718 GKKTPAPQPQAPPPQPTQPLQPKAQAGAKSRPKKREGVHLPTTK 2761


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 53/173 (30%), Positives = 60/173 (34%), Gaps = 48/173 (27%)

Query: 153 PVPPPLGSPLATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYA--- 209
           P+PPPL  PL       P   A+P SPA       Q A EP     P    P  PYA   
Sbjct: 259 PIPPPL--PLLPPCG-YPGLKAEPASPA-------QDAQEP-----PAPPPPLPPYASCS 303

Query: 210 ---------LGGALGAQAAPYPRP------------AAVHEVYAPHFDPRYGPLLMPAAS 248
                    L G   +   P P P            A    + AP   P   P L     
Sbjct: 304 PRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRH 363

Query: 249 GRPA----RLATAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFASPSGDVAQG 297
           GRP     +L   PAP   SP  ELS K + A  AW     P   P G +  G
Sbjct: 364 GRPGAGGGKLNPPPAPPARSPTTELSSKSQQA-TAWT----PTQQPGGQLRNG 411



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 23/136 (16%)

Query: 153 PVPPPLGSPLATAHSELPFAA-------ADPYSPAALHGHLHQG-----ATEPWHHAHPH 200
           P PPPLG+P     S  P +        ADP   +AL   + QG      T+    + P 
Sbjct: 13  PPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRLRKVTQINDRSAPQ 72

Query: 201 HAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPA-----ASGRPARLA 255
                     GG   A       P  + +++A  F     P+L PA     A G+  +  
Sbjct: 73  IESSKGTNKEGGG-SANTRGASTPPTLGDLFAGGF-----PVLRPAGQRDVAGGKTGQGP 126

Query: 256 TAPAPAPGSPPCELSG 271
            + AP+P  P   +SG
Sbjct: 127 GSRAPSPRLPNKTISG 142


>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
           sapiens]
          Length = 323

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 38/104 (36%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 200 HHAHPHHPYALGGALGAQAAPYP----RPAAVHEVYAPHFDPRYGPLLMPAASGRPARLA 255
           HHA   HP A GG   A +AP P     PAA    +A H    + P+L PAA+      A
Sbjct: 180 HHAG-FHPSACGGL--AHSAPLPAATAHPAAA--AHAAHHPAVHHPILPPAAAA-----A 229

Query: 256 TAPAPAPGSPPCELSGKGEPAGAAWAGPGGPFASPSGDVAQGLG 299
            A A A       L G G P+  +   P G   SPS   A  LG
Sbjct: 230 AAAAAAAAVSSASLPGSGLPSVGSIRPPHGLLKSPSAAAAAPLG 273


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 38/119 (31%), Positives = 48/119 (40%), Gaps = 27/119 (22%)

Query: 212 GALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPAR---------LATAPAPAP 262
           GA+ A   PYP   AV+  YAP       P+  PAAS  P R         L+    PAP
Sbjct: 183 GAVPAARPPYP--GAVYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELGPAP 240

Query: 263 GSP--PCELSGKG--------EPAGAAWAGPGGP------FASPSGDVAQGLGLSVDSA 305
             P   C  +  G        +PAG   A P  P      +A P G   QG G ++ +A
Sbjct: 241 SGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAGSAIFAA 299


>gi|40807447 papillary renal cell carcinoma translocation-associated
           gene product isoform 1 [Homo sapiens]
          Length = 491

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 20/114 (17%)

Query: 209 ALGGALGAQAAPYPRPAAVH---EVYAPHFDPRYGPLLMPAASGRPARLATAPA------ 259
           ALGG   +  AP   PA +    ++ AP F P   PLL+P  +G P RL   P       
Sbjct: 34  ALGGLFASLPAP-KGPALLPPPPQMLAPAFPP---PLLLPPPTGDP-RLQPPPPLPFGLG 88

Query: 260 ---PAPGSPPCELSGKGEPAGAAWAGPGGP---FASPSGDVAQGLGLSVDSARR 307
              P PG  P E +G GE  G     P GP      P G     LGL     R+
Sbjct: 89  GFPPPPGVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLPKPKKRK 142


>gi|40807450 papillary renal cell carcinoma translocation-associated
           gene product isoform 2 [Homo sapiens]
          Length = 459

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 20/114 (17%)

Query: 209 ALGGALGAQAAPYPRPAAVH---EVYAPHFDPRYGPLLMPAASGRPARLATAPA------ 259
           ALGG   +  AP   PA +    ++ AP F P   PLL+P  +G P RL   P       
Sbjct: 34  ALGGLFASLPAP-KGPALLPPPPQMLAPAFPP---PLLLPPPTGDP-RLQPPPPLPFGLG 88

Query: 260 ---PAPGSPPCELSGKGEPAGAAWAGPGGP---FASPSGDVAQGLGLSVDSARR 307
              P PG  P E +G GE  G     P GP      P G     LGL     R+
Sbjct: 89  GFPPPPGVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLPKPKKRK 142


>gi|217416343 fibrosin-like 1 [Homo sapiens]
          Length = 1045

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 53/163 (32%), Positives = 63/163 (38%), Gaps = 37/163 (22%)

Query: 128  PWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLATAHSELPFAAADP--YSPAALHGH 185
            P+R    P  +R+FPA+       AP P   GS       E P+   +P  YSP  L G 
Sbjct: 897  PFRGLELP--RRAFPAA-------APAP---GSAALLEPPERPYRDREPHGYSPERLRGE 944

Query: 186  LHQGATEPWHHAHPHHAHPHHPYALGGAL----GAQAAPYPRPAAVHEVYAPHFDPRYGP 241
            L +        A   H  P  P AL GAL    GA   P   PAA+H        P    
Sbjct: 945  LER--------ARAPHLPPAAP-ALDGALLPSLGALHFPRLSPAALHNGLLARTPP---- 991

Query: 242  LLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGAAWAGPG 284
                AA G P  L TA  P   +PP     +  P G    GPG
Sbjct: 992  --AAAALGAPPPLVTAAGPP--TPPGPPRSRTTPLGG--LGPG 1028



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 34/131 (25%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 167 SELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAA 226
           +E P A+  P +      H HQ   +  H     H H   P+  G      AAP P    
Sbjct: 422 AERPGASLGPGALLRAEFHQHQHTHQHTHQHTHQHQHTFAPFPAGLPPTPPAAPPPFDKY 481

Query: 227 VHEVYAPHF---DPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEP-------- 275
             ++ +P+F      + P   PA  G P  L     P PG P   L G  +P        
Sbjct: 482 APKLDSPYFRHSSVSFFPSFPPAIPGLPTLL-----PHPG-PFGSLQGAFQPKVSDPYRA 535

Query: 276 ---AGAAWAGP 283
                  W GP
Sbjct: 536 VVKVSTCWEGP 546



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 205 HHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGS 264
           H+P  L   L      +P   A H    P     +GP   P +      L T P   P S
Sbjct: 641 HYPQDLARPL------FPSTGAAHPASNP-----FGPSAHPGSF-----LPTGPLTDPFS 684

Query: 265 PPCELSGKGEPAGAAWAGPGGPFASPSGDV 294
            P    G G  +  A+ G G    +P G +
Sbjct: 685 RPSTFGGLGSLSSHAFGGLGSHALAPGGSI 714


>gi|23308699 transcription factor MAFB [Homo sapiens]
          Length = 323

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 195 HHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYA--PHFDPRYGPLLMPAASGRPA 252
           HH H HH HPHH Y   G    +  P+  P   H   A  P          +P +   P 
Sbjct: 132 HHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPG 191

Query: 253 RLATAPAPAPG 263
             ATA A A G
Sbjct: 192 PHATASATAAG 202



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 27/90 (30%), Positives = 33/90 (36%), Gaps = 17/90 (18%)

Query: 196 HAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLA 255
           H H HH HPH  +A           YP     H+   PH  P +       AS  P+  A
Sbjct: 131 HHHHHHHHPHPHHA-----------YPGAGVAHDELGPHAHPHHHH--HHQASPPPSSAA 177

Query: 256 TAPAPAPGSPPCELSGKGEPAGAAWAGPGG 285
           +     P S P    G G  A A+    GG
Sbjct: 178 SPAQQLPTSHP----GPGPHATASATAAGG 203


>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
          Length = 274

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 155 PPPLGSPLATAHSELPFAAADPYSPAALHGH--LHQGATEPWHHAHP---HHAHPHHP 207
           PP L  P    H     A A  +S   +H H  LH G  +P  HAHP   HHA PH P
Sbjct: 69  PPGLAPPQPPPHRSRLEAPAHAHSHPHVHVHPLLHHGPAQPHAHAHPHPHHHALPHPP 126


>gi|239757043 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 996

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 38/128 (29%), Positives = 44/128 (34%), Gaps = 32/128 (25%)

Query: 175 DPYSPAALHGHL----HQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEV 230
           D  S A LHG      H   T P HH HPHH H HH             P   P+ +   
Sbjct: 632 DAESLAKLHGASAGAPHSAQTHPHHHHHPHHHHHHH------------HPPQPPSPL--- 676

Query: 231 YAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKGE-PAGAAWAGPGGPFAS 289
                      LL+P     P      PAP P  PP       + P       PGG   S
Sbjct: 677 -----------LLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGTSCS 725

Query: 290 -PSGDVAQ 296
            PS D ++
Sbjct: 726 YPSEDSSE 733


>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
           sapiens]
          Length = 837

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 31/76 (40%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 219 APYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLAT---APAPAPGSPPCELSGKGEP 275
           AP P PAA      P   P   P   PA S   A + T   APAPAP + P   +G G P
Sbjct: 7   APTPAPAAQPR---PLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGTGGP 63

Query: 276 A-GAAWAGPGGPFASP 290
             G+  AG GG  A P
Sbjct: 64  GVGSGGAGSGGDPARP 79


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 208  YALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPC 267
            + +  A    AAP P P       A    P+  P  +PA  G P  LA +PA  P  PPC
Sbjct: 927  FGVASATPGPAAPLPSPTPGESPPASSL-PQPEPSSLPA-QGVPTPLAPSPAMQPPVPPC 984

Query: 268  ELSGKGEPAGAAWAGPGGPFASPS 291
               G    A + W G   P A+P+
Sbjct: 985  PGPGLESSAASRWNGETEPPAAPA 1008



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 242 LLMPAASGRPARLATAPAPAPG-SPPCELSGKGEPAGAAWAGPGGPFA-----SPSGDVA 295
           L    AS  P   A  P+P PG SPP     + EP+     G   P A      P     
Sbjct: 925 LAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPC 984

Query: 296 QGLGLSVDSARRYS 309
            G GL   +A R++
Sbjct: 985 PGPGLESSAASRWN 998



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 3/78 (3%)

Query: 214 LGAQAAPYPRPAAVHEVYAPH---FDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELS 270
           L + + P P P  + E   P      PR   L  PA    P        PA  +   E  
Sbjct: 794 LSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPG 853

Query: 271 GKGEPAGAAWAGPGGPFA 288
            +G P     +G G PFA
Sbjct: 854 PEGTPPSRGSSGEGLPFA 871


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 208  YALGGALGAQAAPYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPC 267
            + +  A    AAP P P       A    P+  P  +PA  G P  LA +PA  P  PPC
Sbjct: 1009 FGVASATPGPAAPLPSPTPGESPPASSL-PQPEPSSLPA-QGVPTPLAPSPAMQPPVPPC 1066

Query: 268  ELSGKGEPAGAAWAGPGGPFASPS 291
               G    A + W G   P A+P+
Sbjct: 1067 PGPGLESSAASRWNGETEPPAAPA 1090



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 242  LLMPAASGRPARLATAPAPAPG-SPPCELSGKGEPAGAAWAGPGGPFA-----SPSGDVA 295
            L    AS  P   A  P+P PG SPP     + EP+     G   P A      P     
Sbjct: 1007 LAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPC 1066

Query: 296  QGLGLSVDSARRYS 309
             G GL   +A R++
Sbjct: 1067 PGPGLESSAASRWN 1080



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 3/78 (3%)

Query: 214 LGAQAAPYPRPAAVHEVYAPH---FDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELS 270
           L + + P P P  + E   P      PR   L  PA    P        PA  +   E  
Sbjct: 876 LSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPG 935

Query: 271 GKGEPAGAAWAGPGGPFA 288
            +G P     +G G PFA
Sbjct: 936 PEGTPPSRGSSGEGLPFA 953


>gi|122937424 one cut homeobox 3 [Homo sapiens]
          Length = 494

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 40/141 (28%), Positives = 48/141 (34%), Gaps = 21/141 (14%)

Query: 156 PPLGSPLATAHSELPFAAADPYSPAA--LHGHLHQGATEPWHHAHPHHAHPHHPYA---- 209
           P LG    T     P     P +  A   H H    A    H  HPH AHPH   A    
Sbjct: 99  PGLGGTYTTL---TPLQHLPPLAAVADKFHQHAAAAAVAGAHGGHPH-AHPHPAAAPPPP 154

Query: 210 ---------LGGALGAQAAPYPRPAAVHEVYAPHFD--PRYGPLLMPAASGRPARLATAP 258
                    + G+           A+V  +Y P+    P  G  L P  +  P  L  AP
Sbjct: 155 PPPQRLAASVSGSFTLMRDERAALASVGHLYGPYGKELPAMGSPLSPLPNALPPALHGAP 214

Query: 259 APAPGSPPCELSGKGEPAGAA 279
            P P  PP  L+  G P   A
Sbjct: 215 QPPPPPPPPPLAAYGPPGHLA 235


>gi|239751555 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 30/96 (31%), Positives = 33/96 (34%), Gaps = 30/96 (31%)

Query: 175 DPYSPAALHGHL----HQGATEPWHHAHPHHAHPHHPYALGGALGAQAAPYPRPAAVHEV 230
           D  S A LHG      H   T P HH HPHH H HH             P   P+ +   
Sbjct: 632 DAESLAKLHGASAGAPHSAQTHPHHHHHPHHHHHHH------------HPPQPPSPL--- 676

Query: 231 YAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPP 266
                      LL+P     P      PAP P  PP
Sbjct: 677 -----------LLLPPQPDEPGSERHHPAPPPPPPP 701


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,446,235
Number of Sequences: 37866
Number of extensions: 1130504
Number of successful extensions: 9467
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 611
Number of HSP's that attempted gapping in prelim test: 6895
Number of HSP's gapped (non-prelim): 2443
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.