NUP35 25735

Name: NUP35	Sequence: fasta or formatted (326aa)		NCBI GI: 31982904
Description: nucleoporin 35kDa		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 22 2 C cysteine 0.6 2 1 D aspartate 4.6 15 2 E glutamate 2.5 8 1 F phenylalanine 3.4 11 1 G glycine 8.3 27 2 H histidine 1.2 4 1 I isoleucine 4.6 15 1 K lysine 4.6 15 2 L leucine 7.4 24 2 M methionine 4.6 15 2 N asparagine 1.5 5 1 P proline 11.7 38 2 Q glutamine 5.5 18 1 R arginine 4.0 13 2 S serine 13.2 43 2 T threonine 6.7 22 2 V valine 5.5 18 2 W tryptophan 0.9 3 1 Y tyrosine 2.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleoporin 35kDa RAPH1 0.030 Ras association and pleckstrin homology domains 1 is... MLL2 0.027 myeloid/lymphoid or mixed-lineage leukemia 2 MBD6 0.027 methyl-CpG binding domain protein 6 COL4A3 0.025 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.025 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.025 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.025 alpha 3 type IV collagen isoform 1 precursor LOC647546 0.022 PREDICTED: hypothetical protein MED15 0.022 mediator complex subunit 15 isoform b SRCAP 0.022 Snf2-related CBP activator protein COL4A5 0.022 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.022 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.022 type IV collagen alpha 5 isoform 3 precursor PTPN23 0.022 protein tyrosine phosphatase, non-receptor type 23 [... GLTSCR1 0.022 glioma tumor suppressor candidate region gene 1 [Ho... BAT2D1 0.022 HBxAg transactivated protein 2 MUC16 0.021 mucin 16 APC2 0.021 adenomatosis polyposis coli 2 MUC12 0.021 PREDICTED: mucin 12 MUC12 0.021 PREDICTED: mucin 12, cell surface associated HCN3 0.021 hyperpolarization activated cyclic nucleotide-gated ... SEC24A 0.019 SEC24 related gene family, member A PCDH21 0.019 protocadherin 21 precursor TPRX1 0.019 tetra-peptide repeat homeobox SMARCA2 0.019 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.019 SWI/SNF-related matrix-associated actin-dependent re... NACA 0.019 nascent polypeptide-associated complex alpha subuni... MAST3 0.019 microtubule associated serine/threonine kinase 3 [H... WASF2 0.017 WAS protein family, member 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.