SEC24A 1698

Name: SEC24A	Sequence: fasta or formatted (1093aa)		NCBI GI: 116174780
Description: SEC24 related gene family, member A		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 63 2 C cysteine 1.3 14 1 D aspartate 3.4 37 1 E glutamate 3.6 39 2 F phenylalanine 3.8 41 2 G glycine 5.8 63 3 H histidine 2.0 22 2 I isoleucine 3.3 36 2 K lysine 2.8 31 2 L leucine 12.2 133 3 M methionine 2.5 27 1 N asparagine 5.9 64 2 P proline 10.1 110 3 Q glutamine 6.5 71 3 R arginine 4.2 46 2 S serine 10.3 113 3 T threonine 6.3 69 2 V valine 6.5 71 2 W tryptophan 0.4 4 1 Y tyrosine 3.6 39 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SEC24 related gene family, member A SEC24B 0.557 SEC24 (S. cerevisiae) homolog B isoform b SEC24B 0.554 SEC24 (S. cerevisiae) homolog B isoform a SEC24C 0.170 SEC24-related protein C SEC24C 0.170 SEC24-related protein C SEC24D 0.153 Sec24-related protein D SEC23B 0.023 Sec23 homolog B SEC23B 0.023 Sec23 homolog B SEC23B 0.023 Sec23 homolog B SEC23A 0.019 SEC23-related protein A ARHGAP17 0.018 nadrin isoform 1 ARHGAP17 0.018 nadrin isoform 2 CCNK 0.017 cyclin K isoform 1 NACA 0.017 nascent polypeptide-associated complex alpha subuni... MUC6 0.016 mucin 6, gastric SF1 0.016 splicing factor 1 isoform 2 SF1 0.016 splicing factor 1 isoform 1 UBAP2L 0.016 ubiquitin associated protein 2-like isoform a [Homo... UBAP2L 0.016 ubiquitin associated protein 2-like isoform b [Homo... GLTSCR1 0.015 glioma tumor suppressor candidate region gene 1 [Ho... MUC2 0.015 mucin 2 precursor WNK4 0.014 WNK lysine deficient protein kinase 4 C13orf23 0.014 hypothetical protein LOC80209 isoform 2 C13orf23 0.014 hypothetical protein LOC80209 isoform 1 WIPF1 0.013 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.013 WAS/WASL interacting protein family, member 1 ZMIZ1 0.013 retinoic acid induced 17 MUC5B 0.012 mucin 5, subtype B, tracheobronchial MLL2 0.012 myeloid/lymphoid or mixed-lineage leukemia 2 R3HDM1 0.012 R3H domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.