SHANK2 11473

Name: SHANK2	Sequence: fasta or formatted (281aa)		NCBI GI: 19743796
Description: SH3 and multiple ankyrin repeat domains 2 isoform 2		Referenced in: Actin and Related Proteins Ankyrin Family Synapses Non-Receptor Tyrosine Kinase Pathways
Other entries for this name: alt prot [1849aa] SH3 and multiple ankyrin repeat domains 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 22 3 C cysteine 1.4 4 1 D aspartate 3.9 11 2 E glutamate 6.0 17 2 F phenylalanine 2.8 8 1 G glycine 8.2 23 3 H histidine 0.7 2 1 I isoleucine 3.6 10 2 K lysine 7.8 22 3 L leucine 6.0 17 1 M methionine 3.9 11 3 N asparagine 4.6 13 2 P proline 9.6 27 4 Q glutamine 3.9 11 1 R arginine 6.8 19 2 S serine 5.3 15 2 T threonine 6.8 19 2 V valine 8.9 25 2 W tryptophan 0.4 1 1 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SH3 and multiple ankyrin repeat domains 2 isoform 2 ... SHANK2 0.810 SH3 and multiple ankyrin repeat domains 2 isoform 1... SHANK3 0.432 SH3 and multiple ankyrin repeat domains 3 SHANK1 0.380 SH3 and multiple ankyrin repeat domains 1 SNX27 0.076 sorting nexin family member 27 SLC9A3R1 0.057 sodium/hydrogen exchanger regulatory factor 1 PDZK1 0.054 PDZ domain containing 1 ARHGEF12 0.048 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... MAGI3 0.048 membrane-associated guanylate kinase-related 3 iso... MAGI3 0.048 membrane-associated guanylate kinase-related 3 iso... MAST4 0.044 microtubule associated serine/threonine kinase fami... ARHGEF11 0.041 Rho guanine nucleotide exchange factor (GEF) 11 isofo... MAGI1 0.041 membrane associated guanylate kinase, WW and PDZ dom... MAGI1 0.041 membrane associated guanylate kinase, WW and PDZ dom... ARHGAP21 0.041 Rho GTPase activating protein 21 GRASP 0.041 GRP1 (general receptor for phosphoinositides 1)-asso... MAST1 0.041 microtubule associated serine/threonine kinase 1 [Ho... MAGI1 0.041 membrane associated guanylate kinase, WW and PDZ dom... MAST3 0.041 microtubule associated serine/threonine kinase 3 [H... ARHGEF11 0.041 Rho guanine nucleotide exchange factor (GEF) 11 isof... MAST2 0.039 microtubule associated serine/threonine kinase 2 [H... CYTIP 0.039 cytohesin 1 interacting protein DEPDC6 0.037 DEP domain containing 6 SYNPO2L 0.037 synaptopodin 2-like isoform a MAGI2 0.037 membrane associated guanylate kinase, WW and PDZ dom... SLC9A3R2 0.037 solute carrier family 9 isoform 3 regulator 2 isofo... SLC9A3R2 0.037 solute carrier family 9 isoform 3 regulator 2 isofor... ARHGAP23 0.037 Rho GTPase activating protein 23 PDZD3 0.037 PDZ domain containing 3 MAGIX 0.035 MAGI family member, X-linked isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.