Guide to the Human Genome
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Name: ARHGEF11 Sequence: fasta or formatted (1522aa) NCBI GI: 7662086
Description:

Rho guanine nucleotide exchange factor (GEF) 11 isoform 1

Referenced in:

Glutamate
Rho and Rac

Other entries for this name:
alt prot [1562aa] Rho guanine nucleotide exchange factor (GEF) 11 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         99           3
 C cysteine            1.0         15           1
 D aspartate           6.1         93           2
 E glutamate           8.7        133           4
 F phenylalanine       2.2         34           2
 G glycine             6.6        101           2
 H histidine           2.5         38           2
 I isoleucine          4.1         62           2
 K lysine              5.0         76           2
 L leucine            11.0        167           3
 M methionine          2.0         30           1
 N asparagine          2.8         42           2
 P proline             8.9        136           6
 Q glutamine           5.2         79           2
 R arginine            6.5         99           2
 S serine              9.9        150           3
 T threonine           4.7         72           2
 V valine              4.3         65           2
 W tryptophan          0.7         10           1
 Y tyrosine            1.4         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho guanine nucleotide exchange factor (GEF) 11 isofo... 
ARHGEF11              0.994   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF12              0.211   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
ARHGEF1               0.140   Rho guanine nucleotide exchange factor 1 isoform 1 [...
ARHGEF1               0.140   Rho guanine nucleotide exchange factor 1 isoform 2 [...
ARHGEF1               0.129   Rho guanine nucleotide exchange factor 1 isoform 3 [...
ARHGEF18              0.055   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.054   Rho/Rac guanine nucleotide exchange factor 18 isofor...
ARHGEF2               0.053   Rho/Rac guanine nucleotide exchange factor 2 isofor...
ARHGEF2               0.053   Rho/Rac guanine nucleotide exchange factor 2 isoofor...
ARHGEF2               0.053   Rho/Rac guanine nucleotide exchange factor 2 isofor...
AKAP13                0.051   A-kinase anchor protein 13 isoform 1 
AKAP13                0.051   A-kinase anchor protein 13 isoform 3 
AKAP13                0.051   A-kinase anchor protein 13 isoform 2 
RGNEF                 0.048   Rho-guanine nucleotide exchange factor 
PLEKHG5               0.035   pleckstrin homology domain containing family G membe...
PLEKHG5               0.035   pleckstrin homology domain containing family G memb...
PLEKHG5               0.035   pleckstrin homology domain containing family G memb...
PLEKHG5               0.035   pleckstrin homology domain containing family G memb...
PLEKHG5               0.035   pleckstrin homology domain containing family G memb...
ITSN1                 0.032   intersectin 1 isoform ITSN-l 
ITSN2                 0.031   intersectin 2 isoform 3 
ITSN2                 0.031   intersectin 2 isoform 1 
PLEKHG6               0.024   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.024   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.024   pleckstrin homology domain-containing family G memb...
ARHGEF3               0.022   Rho guanine nucleotide exchange factor 3 isoform 2 ...
ARHGEF3               0.021   Rho guanine nucleotide exchange factor 3 isoform 1 ...
ARHGEF3               0.021   Rho guanine nucleotide exchange factor 3 isoform 3 [H...
ECT2                  0.020   epithelial cell transforming sequence 2 oncogene pro...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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